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Molecular mechanisms of flotillin complexes in organizing membrane microdomains
Open accessPreprint — published as 10.1038/s41467-026-69197-3 · Paper page
Abstract
Summary: Flotillin-1 and flotillin-2 form hetero-oligomers to create flotillin membrane microdomains essential for endocytosis and protein sorting. However, the mechanisms of flotillin oligomerization and microdomain organization remain incompletely understood. Here, we present the cryo-EM structure of human flotillin complex, showing that flotillin-1 and -2 form a 44-mer, membrane attached, and dome-shaped structure that defines a 30-nm circular membrane domain. The cryo-ET data demonstrates that while attached to the cytoplasmic leaflet in situ, flotillin complexes possess intrinsic structural plasticity on the native membrane. Each flotillin complex may represent a fundamental unit of membrane microdomains, with their clustering enabling the formation of larger and more elaborate domains. We further reveal that phosphorylation at residues Y160 (flotillin-1) and Y163 (flotillin-2) may act as a molecular switch to modulate complex assembly, potentially regulating its function in endocytosis. These findings demonstrate the molecular mechanism of flotillin-mediated membrane segregation and microdomain formation, and suggest a previously unrecognized role of flotillin in sequestrating membrane proteins.
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Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
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Research works printed but not linked: 82
- 10.1126/science.1174621 · DOI · Paper page
- 10.1016/j.bbamem.2023.184135 · DOI
- 10.1038/nrm.2017.16 · DOI · Paper page
- 10.1038/s41580-022-00524-4 · DOI
- 10.1038/42408 · DOI · Paper page
- 10.1016/j.tcb.2020.01.009 · DOI
- 10.1074/jbc.272.21.13793 · DOI
- 10.1016/j.cub.2007.05.078 · DOI
- 10.1523/JNEUROSCI.5345-07.2008 · DOI
- 10.1038/ncb1342 · DOI
- 10.1242/jcs.039024 · DOI
- Abousawan, J. , Orofiamma, L. A. , Fairn, G. D. & Antonescu, C. N . HER2 expression defines unique requirements for flotillin and c-Src in EGFR signaling. J Cell Sci 136 (2023). · DOI
- 10.1038/s41467-019-12352-w · DOI
- 10.1038/oncsis.2017.47 · DOI
- 10.1042/bj20031100 · DOI
- Affentranger, S. , Martinelli, S. , Hahn, J. , Rossy, J. & Niggli, V . Dynamic reorganization of flotillins in chemokine-stimulated human T-lymphocytes. BMC Cell Biol 12, 28 (2011). · DOI
- 10.1242/jcs.03336 · DOI
- Kwiatkowska, K. , Matveichuk, O. V. , Fronk, J. & Ciesielska, A . Flotillins: At the Intersection of Protein S-Palmitoylation and Lipid-Mediated Signaling. Int J Mol Sci 21 (2020). · DOI
- 2020, Flotillin membrane domains in cancer, Cancer Metastasis Rev, 39, 361, 10.1007/s10555-020-09873-y · DOI
- 10.1091/mbc.12.10.3031 · DOI
- 10.1172/JCI42958 · DOI
- 10.1038/s41467-022-33951-0 · DOI
- 10.1038/s41422-020-00409-1 · DOI
- 10.1074/jbc.M110.134775 · DOI
- Planchon, D. et al. MT1-MMP targeting to endolysosomes is mediated by upregulation of flotillins. J Cell Sci 131 (2018). · DOI
- 10.1182/blood.V97.4.1141 · DOI
- 10.1016/j.tcb.2007.06.005 · DOI
- 10.1042/BJ20061686 · DOI
- 2025, Structural basis for membrane microdomain formation by a human Stomatin complex, Nat Commun, 16, 7439, 10.1038/s41467-025-62859-8 · DOI
- Vallese, F. , Li, H. & Clarke, O. B . Stomatin encapsulates aquaporin-1 and urea transporter-B in the erythrocyte membrane. bioRxiv (2025). · DOI
- 10.1038/s41556-025-01620-1 · DOI
- Luo, D. et al. Structural basis for prohibitin-mediated regulation of mitochondrial m-AAA protease. bioRxiv, 2025.2004.2015.648916 (2025). · DOI
- Gao, J. , Sherpa, D. , Kupko, N. & Shao, S . Structures of human organellar SPFH protein complexes. bioRxiv, 2025.2004.2021.649849 (2025). · DOI
- Yan, L. et al. Cryo-EM Structure of the Erlin1/2 Complex Reveals a Dynamic Scaffold for Membrane Protein Sequestration and Microdomain Assembly. bioRxiv, 2025.2006.2014.659634 (2025). · DOI
- 10.1016/J.CELREP.2022.110890 · DOI
- 10.1038/s41422-021-00598-3 · DOI
- 2025, Bacterial flotillins as destabilizers of phospholipid membranes, Biochim Biophys Acta Biomembr, 1867, 184399, 10.1016/j.bbamem.2024.184399 · DOI
- 10.1016/j.cell.2017.10.012 · DOI
- Zielinska, A. et al. Flotillin-mediated membrane fluidity controls peptidoglycan synthesis and MreB movement. Elife 9 (2020). · DOI
- 10.1128/MMBR.00036-14 · DOI
- 2013, Membrane domains and the "lipid raft" concept, Curr Med Chem, 20, 4
- 10.1073/pnas.2409334121 · DOI
- 10.1038/s41422-021-00598-3 · DOI
- 10.1096/fj.05-4760fje · DOI
- 10.1038/s41422-020-00409-1 · DOI
- 10.1194/jlr.E600002-JLR200 · DOI
- 10.1038/nprot.2012.059 · DOI
- 10.1016/j.bbamem.2007.08.028 · DOI
- 2022, Migrasome biogenesis and functions, FEBS J, 289, 7246, 10.1111/febs.16183 · DOI
- 2020, Membrane Compartmentalization and Scaffold Proteins in Leukocyte Migration, Front Cell Dev Biol, 8, 285, 10.3389/fcell.2020.00285 · DOI
- 10.1371/journal.pone.0197401 · DOI
- 2025, An asymmetric nautilus-like HflK/C assembly controls FtsH proteolysis of membrane proteins, EMBO J, 44, 2501, 10.1038/s44318-025-00408-1 · DOI
- 10.1007/s00018-015-1898-y · DOI
- 10.1016/j.bbamem.2013.07.018 · DOI
- Genest, M. et al. Upregulated flotillins and sphingosine kinase 2 derail AXL vesicular traffic to promote epithelial-mesenchymal transition. J Cell Sci 135 (2022). · DOI
- 10.1038/ncb2987 · DOI
- 2020, Measuring Ca(2+) in Living Cells, Adv Exp Med Biol, 1131, 7, 10.1007/978-3-030-12457-1_2 · DOI
- 10.1038/nature13567 · DOI
- 10.1074/mcp.T400008-MCP200 · DOI
- 10.1093/nar/gkm067 · DOI
- 10.1038/nature02013 · DOI
- 10.1074/jbc.M113.519116 · DOI
- 10.1016/j.bpj.2016.03.012 · DOI
- 10.1038/nmeth.2089 · DOI · Paper page
- 10.1038/nmeth.4193 · DOI
- 10.1016/j.jsb.2015.11.003 · DOI
- 10.1042/BCJ20210708 · DOI
- 10.1107/S0907444910007493 · DOI · Paper page
- 10.1093/NAR/GKAB1061 · DOI · Paper page
- 10.1107/S2059798318006551 · DOI
- 10.1107/S0907444909042073 · DOI · Paper page
- 10.1002/jcc.20084 · DOI
- 10.1016/j.cell.2017.12.030 · DOI
- 10.1016/j.jsb.2016.06.007 · DOI
- 2023, TOMOMAN: Streamlining Cryo-electron Tomography and Subtomogram Averaging Workflows Using TOMOgram MANager. Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada, 29, 1020
- 10.1006/jsbi.1996.0013 · DOI
- 10.1038/s41592-019-0580-y · DOI
- Lamm, L. , et al. MemBrain v2: an end-to-end tool for the analysis of membranes in cryo-electron tomography. bioRxiv, 2024.2001.2005.574336 (2024). · DOI
- 10.1016/j.jsb.2004.10.006 · DOI
- 2023, Extensive Angular Sampling Enables the Sensitive Localization of Macromolecules in Electron Tomograms, 24, 13375
- 10.1038/nprot.2016.124 · DOI
- 10.1021/bi0156557 · DOI
Metadata
- Authors
- Lu, M.-A., Qian, Y., Ma, L., Hong, J., Li, X., Yu, L., Guo, Q., & Gao, N.
- Affiliations
- Peking University (CN)
- Corresponding author
- Guo, Qiang
- Gao, Ning
- Venue
- Nature Communications
- Publisher
- openRxiv
- Published
- 2024-05-25
- Volume
- 17
- Issue
- 1
- ISSN
- 2041-1723 (ISSN-L)
- OpenAlex
- W7128440024
- Cited by
- 13
- References
- 1
- Citations by year
- 2026: 8 · 2025: 3 · 2024: 2
- FWCI
- 27.17
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Nature Communications (publishedVersion, cc-by-nc-nd)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
- PubMed Central (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Funders
- National Natural Science Foundation of China (92354306)
- Beijing Natural Science Foundation (JQ24031)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Lipid Membrane Structure and Behavior
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Caveolin-1 and cellular processes
- Keywords
- flotillin-1, flotillin-2, lipid rafts, oligomerization, cryo-EM structure, cryo-electron tomography, phosphorylation, endocytosis, protein sorting, structural plasticity
- MeSH terms
- Endocytosis, Humans, Membrane Proteins, Phosphorylation, Cryoelectron Microscopy, Membrane Microdomains
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