A multistep damage recognition mechanism for global genomic nucleotide excision repair

Cited by (433)

Items 301–400 of 433

  1. Recovery of protein synthesis to assay DNA repair activity in transcribed genes in living cells and tissues
    van der Woude, Melanie, Davó-Martínez, Carlota, Thijssen, Karen L, Vermeulen, Wim, Lans, Hannes · 2023 · Nucleic Acids Research
  2. Detection of oxaliplatin- and cisplatin-DNA lesions requires different global genome repair mechanisms that affect their clinical efficacy
    Jana Slyšková, Alba Muniesa-Vargas, Israel Tojal da Silva, Rodrigo Duarte Drummond, Jiyeong Park, David Häckes, Isabella Poetsch, Cristina Ribeiro-Silva, Amandine Moretton, Petra Heffeter et al. · 2023 · NAR Cancer
  3. Differing structures and dynamics of two photolesions portray verification differences by the human XPD helicase
    Iwen Fu, Nicholas E. Geacintov, Suse B. Broyde · 2023 · Nucleic Acids Research
  4. Clinical importance of DNA repair inhibitors in cancer therapy
    Noriko Hosoya, Kiyoshi Miyagawa · 2009 · memo - Magazine of European Medical Oncology
  5. Repair Synthesis Assay for Nucleotide Excision Repair Activity Using Fractionated Cell Extracts and UV-Damaged Plasmid DNA
    Maureen Biggerstaff, Richard Dean Wood · 2008 · Methods in molecular biology
  6. Def1 and Dst1 play distinct roles in repair of AP lesions in highly transcribed genomic regions
    Norah Auma Owiti, Christopher R. Lopez, Shivani S. Singh, Andrei Stephenson, Nayun Kim · 2017 · DNA repair
  7. Nucleotide Excision Repair in Eukaryotes
    Errol C. Friedberg, Graham Charles Walker, Wolfram Siede, Richard Dean Wood, Roger Alan Schultz, Tom Ellenberger · 2014 · ASM Press eBooks
  8. Covalent Polycyclic Aromatic Hydrocarbon–DNA Adducts: Carcinogenicity, Structure, and Function
    Suse B. Broyde, Lihua Wang, Yuqin Cai, Lei Jia, Robert Shapiro, Dinshaw J. Patel, Nicholas E. Geacintov · 2010 · Humana Press eBooks
  9. Nucleotide Excision Repair Is Reduced in Oral Epithelial Tissues Compared with Skin‡
    David L. Mitchell, Lakshmi Paniker, Dianne Eyvonn Godar · 2012 · Photochemistry and Photobiology
  10. Structural basis for the recognition and processing of DNA containing bulky lesions by the mammalian nucleotide excision repair system
    Alexey N. Evdokimov, Alexandra Y. Tsidulko, Alexander V. Popov, Yury N. Vorobiev, Alexander A. Lomzov, Л. С. Королева, Vladimir N. Silnikov, Irina O. Petruseva, Olga I. Lavrik · 2017 · DNA repair
  11. Inhibition of Excision of Oxidatively Generated Hydantoin DNA Lesions by NEIL1 by the Competitive Binding of the Nucleotide Excision Repair Factor XPC-RAD23B
    Marina Kolbanovskiy, Yoonjung Shim, Jung‐Hyun Min, Nicholas E. Geacintov, Vladimir Shafirovich · 2020 · Biochemistry
  12. Repair of bulky DNA lesions deriving from polycyclic aromatic hydrocarbons
    L. V. Skosareva, Natalia A. Lebedeva, Olga I. Lavrik, Nadejda I. Rechkunova · 2013 · Molecular Biology
  13. Intersections between transcription-coupled repair and alkylation damage reversal
    Joshua R. Brickner, Brittany A. Townley, Nima Mosammaparast · 2019 · DNA repair
  14. Pyrimidine Dimers: UV‐Induced DNA Damage
    Shigenori Iwai · 2008 · Wiley eBooks
  15. Mitotic UV Irradiation Induces a DNA Replication-Licensing Defect that Potentiates G1 Arrest Response
    Morino, Masayuki, Nukina, Kohei, Sakaguchi, Hiroki, Maeda, Takeshi, Takahara, Michiyo, Shiomi, Yasushi, Nishitani, Hideo · 2015 · PLOS ONE
  16. The nucleotide excision repair proteins through the lens of molecular dynamics simulations
    Éderson Sales Moreira Pinto, Mathias J. Krause, Márcio Dorn, Bruno César Feltes · 2023 · DNA repair
  17. Functional Insights Gained from Structural Analyses of DNA Duplexes that Contain UV‐Damaged Photoproducts†
    Chin‐Ju Park, Joon‐Hwa Lee, Byong‐Seok Choi · 2006 · Photochemistry and Photobiology
  18. Every protagonist has a sidekick: Structural aspects of human xeroderma pigmentosum‐binding proteins in nucleotide excision repair
    Bruno César Feltes · 2021 · Protein Science
  19. Hormonal Regulation of the Repair of UV Photoproducts in Melanocytes by the Melanocortin Signaling Axis
    Stuart Gordon Jarrett, John August D'Orazio · 2016 · Photochemistry and Photobiology
  20. Eukaryotic Nucleotide Excision Repair
    Bennett Van Houten, Muwen Kong · 2015 · Elsevier eBooks
  21. Effect of base sequence context on the conformational heterogeneity of aristolactam-I adducted DNA: structural and energetic insights into sequence-dependent repair and mutagenicity
    Preetleen Kathuria, Purshotam Sharma, Stacey D. Wetmore · 2015 · Toxicology Research
  22. Genetic therapy of Xeroderma Pigmentosum: analysis of strategies and translation
    Maria Gonçalves-Maia, Thierry Magnaldo · 2016 · Expert Opinion on Orphan Drugs
  23. Recognition and removal of clustered DNA lesions via nucleotide excision repair
    N.V. Naumenko, Irina O. Petruseva, Aleksandr Lomzov, Olga I. Lavrik · 2021 · DNA repair
  24. A formamidopyrimidine derivative from the deoxyguanosine adduct produced by food contaminant acrylamide induces DNA replication block and mutagenesis
    Jun‐ichi Akagi, Masayuki Yokoi, Yumi Miyake, Tsuyoshi Shirai, Tomohiro Baba, Young‐Man Cho, Fumio Hanaoka, Kaoru Sugasawa, Shigenori Iwai, Kumiko Ogawa · 2023 · Journal of Biological Chemistry
  25. Analysis of cytosine deamination events in excision repair sequencing reads reveals mechanisms of incision site selection in NER
    Benjamin Morledge-Hampton, Ananth Kalyanaraman, John J. Wyrick · 2023 · Nucleic Acids Research
  26. SIRT1 activation mediates heat-induced survival of UVB damaged Keratinocytes
    Leslie Calapre, Elin Solomonovna Gray, Sandrine Kurdykowski, Anthony S. David, Pascal Descargues, Mel R. Ziman · 2017 · BMC Dermatology
  27. Ion Irradiation as a Tool to Reveal the Spatiotemporal Dynamics of DNA Damage Response Processes
    G. Taucher-Scholz, Burkhard Jakob · 2006 · Springer eBooks
  28. A novel high-throughput single-molecule technique DNA curtain: Applications for DNA metabolism
    Soyeong An, Youngseo Kim, Ja Yil Lee · 2025 · Molecules and Cells
  29. DNA Bearing Bulky Fluorescent and Photoreactive Damage in Both Strands as Substrates of the Nucleotide Excision Repair System
    N. V. Lukyanchikova, Irina O. Petruseva, A. N. Evdokimov, Л. С. Королева, Olga I. Lavrik · 2018 · Molecular Biology
  30. Nuclear organization of nucleotide excision repair is mediated by RING1B dependent H2A-ubiquitylation
    Shalaka Chitale, Holger Richly · 2017 · Oncotarget
  31. Identification of low-molecular-weight vitellogenin 1 (Vg1)-like proteins as nucleotide excision repair (NER) factors in developing zebrafish (Danio rerio) using a transcription-based DNA repair assay
    Yung‐Chi Shen, Todd Hsu, Li-Bin Ling, Wen-Chian You, Chia‐Wei Liu · 2017 · Fish Physiology and Biochemistry
  32. The Xeroderma Pigmentosum Group C Protein Complex and Ultraviolet‐Damaged DNA‐Binding Protein: Functional Assays for Damage Recognition Factors Involved in Global Genome Repair
    Kaoru Sugasawa · 2006 · Methods in enzymology on CD-ROM/Methods in enzymology
  33. Binding of Distamycin A to UV-Damaged DNA
    Aki Inase, Takashi S Kodama, Jafar Sharif, Yan Xu, Hirohito Ayame, Hiroshi Sugiyama, Shigenori Iwai · 2004 · Journal of the American Chemical Society
  34. Mechanisms of Base Excision Repair and Nucleotide Excision Repair
    Orlando D. Schärer, Arthur J. Campbell · 2010 · Wiley eBooks
  35. The DNA damage-sensing NER repair factor XPC-RAD23B does not recognize bulky DNA lesions with a missing nucleotide opposite the lesion
    Katie M. Feher, Alexander Kolbanovskiy, Alexander Durandin, Yoonjung Shim, Jung‐Hyun Min, Yuan Cho Lee, Vladimir Shafirovich, Hong Mu, Suse B. Broyde, Nicholas E. Geacintov · 2020 · DNA repair
  36. Cancer Genetics and Epigenetics in Cancer Risk Assesment
    Anna Meiliana, Nurrani Mustika Dewi, Andi Wijaya · 2021 · Molecular and Cellular Biomedical Sciences
  37. DNA Damage and Transcription Elongation: Consequences and RNA Integrity
    Kristian Dreij, John A. Burns, Alexandra Dimitri, Lana Nirenstein, Taissia Noujnykh, David A. Scicchitano · 2010 · Wiley eBooks
  38. DNA Damage, Repair Mechanisms, and Chromosomal Aberrations
    Ariungerel Gerelchuluun · 2020 · Springer eBooks
  39. Revisiting the structural features of the xeroderma pigmentosum proteins: Focus on mutations and knowledge gaps
    Bruno César Feltes · 2022 · Mutation Research/Reviews in Mutation Research
  40. Structural modeling and analyses of genetic variations in the human XPC nucleotide excision repair protein
    Jennifer Le, Jung‐Hyun Min · 2023 · Journal of Biomolecular Structure and Dynamics
  41. In situ detection of acetylaminofluorene–DNA adducts in human cells using monoclonal antibodies
    Takaaki Iwamoto, Nobuhiko Kobayashi, Kyoko Imoto, Aya Yamamoto, Yu Nakamura, Yukika Yamauchi, Hiromi Okumura, Akiko Tanaka, Fumio Hanaoka, Shinya Shibutani et al. · 2004 · DNA repair
  42. Involvement of Human Small Fragment Nuclease in the Resistance of Human Cells to UV-C–induced Cell Death¶
    Seiro Ito, K Kita, Ling Zhai, Chieko Wano, Toshikazu Suzuki, Akira Yamaura, Nobuo Suzuki · 2004 · Photochemistry and Photobiology
  43. Characterization of distamycin A binding to damaged DNA
    Aki Inase-Hashimoto, Shinya Yoshikawa, Yusuke Kawasaki, Takashi S Kodama, Shigenori Iwai · 2007 · Bioorganic & Medicinal Chemistry
  44. Structural basis of cyclobutane pyrimidine dimer recognition by UV-DDB in the nucleosome
    S. Matsumoto, Yoshimasa Takizawa, Mitsuo Ogasawara, Kana Hashimoto, Lumi Negishi, Wenjie Xu, Haruna Tachibana, Junpei Yamamoto, Shigenori Iwai, Kaoru Sugasawa et al. · 2025 · Nature Communications
  45. Therapeutic Potential of Metal-Based and PARP Inhibitor Chemotherapy for BRCA1-Associated Triple-Negative Breast Cancer
    Adisorn Ratanaphan · 2025 · International Journal of Molecular Sciences
  46. Model DNA for investigation of mechanism of nucleotide excision repair
    A. N. Evdokimov, Olga I. Lavrik, Irina O. Petruseva · 2014 · Biopolymers and Cell
  47. “Flexible hinge” dynamics in mismatched DNA revealed by fluorescence correlation spectroscopy
    Timour B. Ten, Viktoriya Zvoda, Manas Kumar Sarangi, Serguei V. Kuznetsov, Anjum Ansari · 2022 · Journal of Biological Physics
  48. Clinicopathological significance and prognostic value of Xeroderma pigmentosum complementary group C (XPC) expression in sporadic breast cancer patients
    Xuefeng Bai, Feng Jin, Yingzi Fu, Zhaojin Yu, Lin Zhao, Jie Ren, Yanlin Li, Xuyang Jiao, Haishan Zhao, Weifan Yao et al. · 2011 · Medical Oncology
  49. Interaction of nucleotide excision repair proteins with DNA containing bulky lesion and apurinic/apyrimidinic site
    L. V. Skosareva, Natalia A. Lebedeva, Nadejda I. Rechkunova, Ekaterina A. Maltseva, Pavel E. Pestryakov, Olga I. Lavrik · 2012 · Biochemistry (Moscow)
  50. Targeting the Nucleotide Excision Repair Pathway for Therapeutic Applications
    John J. Turchi, Steve M. Patrick · 2011 · Elsevier eBooks
  51. Molecular Mechanism, Dynamics, and Energetics of Protein-Mediated Dinucleotide Flipping in a Mismatched DNA: A Computational Study of the RAD4-DNA Complex
    Kartheek Pitta, Marimuthu Krishnan · 2018 · Journal of Chemical Information and Modeling
  52. Prolonged stalling of RNA Polymerase II at DNA damage explains phenotypical differences between Cockayne and UV-sensitive syndromes
    Camila Gonzalo-Hansen, Barbara Steurer, Roel C. Janssens, Di Zhou, Marjolein van Sluis, Hannes Lans, Jurgen A. F. Marteijn · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  53. Complex p53 dynamics regulated by miR-125b in cellular responses to reactive oxidative stress and DNA damage
    Md. Zubbair Malik, MOHAMMED H. DASHTI, Amit Jangid, Arshad Mohamed Channanath, Sumi Elsa John, R K Brojen Singh, Fahd Al‐Mulla, Thangavel Alphonse Thanaraj · 2024 · Briefings in Bioinformatics
  54. CARM1/PRMT4 facilitates XPF–ERCC1 heterodimer assembly and maintains nucleotide excision repair activity
    Hiroyuki Niida, Masahiko Ito, Kenta Iijima, Akira Motegi, Rin Ogihara, Hironobu Akiyama, Chiharu Uchida, Satoshi Sakai, Tatsuya Ohhata, Atsushi Hatano et al. · 2025 · Nucleic Acids Research
  55. Synthesis of model DNA and their application as substrates of nucleotide excision repair
    A. N. Evdokimov, Alexandra Y. Tsidulko, Irina O. Petruseva, Л. С. Королева, Inna Yu. Serpokrylova, Vladimir N. Silnikov, Olga I. Lavrik · 2012 · Biopolymers and Cell
  56. Mapping the recognition pathway of cyclobutane pyrimidine dimer in DNA by Rad4/XPC
    Nikhil Jakhar, Akshay Prabhakant, Marimuthu Krishnan · 2023 · Nucleic Acids Research
  57. Preparation of Oligodeoxyribonucleotides Containing the Pyrimidine(6–4)pyrimidone Photoproduct by Using a Dinucleotide Building Block
    Shigenori Iwai · 2013 · Current Protocols in Nucleic Acid Chemistry
  58. Nucleotide Excision Repair and Cancer
    Joost P.M., Mirjam Luijten, Leon H.F., Harry VAN STEEG · 2011 · InTech eBooks
  59. Indirect Detection of DNA Damage
    Louis James Maher · 2005 · Chemistry & Biology
  60. Recognition of Oxidized Thymine Base on the Single-Stranded DNA by Replication Protein A
    Daisuke Irie, Akira Mei Ono, Shunji Izuta · 2006 · Nucleosides Nucleotides & Nucleic Acids
  61. Melanoma — Epidemiology, Risk Factors, and the Role of Adaptive Pigmentation
    Erin M. Wolf Horrell, Kalin Wilson, John August D'Orazio · 2015 · InTech eBooks
  62. Dna Repair Mechanisms As Drug Targets In Prokaryotes
    Lorena Michelle Coronado, I. De La Guardia Carolina, Yisett González, M. Restrepo Carlos, M. Tayler Nicole · 2011 · Current Trends in Biotechnology and Pharmacy
  63. 2,2,4-Triamino-5(2H)-oxazolone is a weak substrate for nucleotide excision repair
    Katsuhito Kino, Fumio Hanaoka, Kaoru Sugasawa, Hiroshi Miyazawa · 2016 · Journal of Pharmaceutical Negative Results
  64. Involvement of Human Small Fragment Nuclease in the Resistance of Human Cells to UV‐C‐induced Cell Death¶
    Seiro Ito, K Kita, Ling Zhal, Chieko Wano, Toshikazu Suzuki, Akira Yamaura, Nobuo Suzuki · 2004 · Photochemistry and Photobiology
  65. DNA Damage Recognition and Repair in Mammalian Global Genome Nucleotide Excision Repair
    Wataru Sakai, Kaoru Sugasawa · 2016 · Springer eBooks
  66. RNA polymerase II processing facilitates DNA repair and prevents DNA damage-induced neuronal and developmental failure
    Melanie van der Woude, Karen L. Thijssen, Mariangela Sabatella, Jurgen A. F. Marteijn, Wim Vermeulen, Hannes Lans · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  67. Disorders with Deficiency in TC-NER: Molecular Pathogenesis of Cockayne Syndrome and UV-Sensitive Syndrome
    Chaowan Guo, Tomoo Ogi · 2018 · Springer eBooks
  68. Molecular mechanisms of DNA damage recognition and chromatin dynamics regulating mammalian nucleotide excision repair
    Masayuki Kusakabe, Kaoru Sugasawa · 2026 · DNA repair
  69. The role of XPC protein deficiency in tobacco smoke-induced DNA hypermethylation of tumor suppressor genes
    Wang Gan, Le Wang, Vanitha Bhoopalan, Yue Xi, Deepak K. Bhalla, David Wang, Xiaoxin Xu · 2013 · Open Journal of Genetics
  70. DNA damage response genes and chromosome 11q21-q24 candidate tumor suppressor genes in breast cancer
    Minna Allinen · 2002
  71. Photoreactive DNA as a tool for studying topography of nucleotide excision repair complex
    Nadejda I. Rechkunova, Yu. S. Krasikova, Ekaterina A. Maltseva, Olga I. Lavrik · 2012 · Biopolymers and Cell
  72. The Crossroads of Ubiquitination and DNA Repair: A Structural Perspective
    Gondichatnahalli M. Lingaraju, Kerstin Böhm, Julius Rabl, Simone Cavadini, Eric S. Fischer, Susanne A. Kassube, Nicolas H. Thomä · 2016 · Springer eBooks
  73. Lesion Recognition by XPC (Rad4) Protein
    Yogambigai Velmurugu · 2016 · Springer theses
  74. DNA damage and histone variants
    Sebastiano Giallongo, Oriana Lo Re, Manlio Vinciguerra · 2022 · Elsevier eBooks
  75. DNA Damage Recognition for Mammalian Global Genome Nucleotide Excision Repair
    Kaoru Sugasawa · 2011 · InTech eBooks
  76. Molecular Mechanism of DNA Damage Recognition for Global Genomic Nucleotide Excision Repair: A Defense System Against UV-Induced Skin Cancer
    Kaoru Sugasawa · 2018 · Springer eBooks
  77. The DNA Damage Response, DNA Repair, and AML
    David P. Steensma · 2007 · Humana Press eBooks
  78. Interplay of the Ubiquitin Proteasome System with Nucleotide Excision Repair
    Steven Bergink · 2006 · RePub (Erasmus University Rotterdam)
  79. Quantitative fluorescence nanospectroscopy of nucleotide excision repair : from single molecules to cells
    Dianwen Zhang · 2008
  80. Estudos de reparo de DNA por excisão de nucleotídeos em lesões oxidativas em células de mamíferos.
    Carolina Maria Berra · 2008
  81. Mammalian RAD23 homologs: multifunctional. proteins in DNA repair and development
    Jessica M.Y. Ng · 2001 · EUR Research Repository (Erasmus University Rotterdam)
  82. Clinical, functional, and genetic analysis of NER defective patients and characterization of five novel XPG mutations
    Annika Schäfer · 2013
  83. SINGLE-MOLECULE STUDIES OF RAD4-RAD23 REVEAL A DYNAMIC DNA DAMAGE RECOGNITION PROCESS
    Muwen Kong · 2017 · D-Scholarship@Pitt (University of Pittsburgh)
  84. Mechanism of Nucleotide Excision Repair in Eukaryotes
    Errol C. Friedberg, Graham Charles Walker, Wolfram Siede, Richard Dean Wood, Roger Alan Schultz, Tom E. Ellenberger · 2014 · ASM Press eBooks
  85. Role of Histone H4 Mutations in DNA Repair Pathways
    Rahman, Sheikh Arafatur · 2016 · Civil War Book Review
  86. Implications of BRCA1 mutations in basal-like breast cancer development and treatment
    Yuexi Gu · 2015 · Työväentutkimus Vuosikirja
  87. Einfluss der Immunsuppressiva Cyclosporin A und Everolimus auf die funktionelle DNA-Reparaturfähigkeit sowie auf die Regulation von DNA-Reparatur-Genen
    Christiane Kuschal · 2009 · eDiss (Georg-August-Universität Göttingen)
  88. Mecanismos de reparo de DNA envolvidos com lesões induzidas por agente alquilante (Nimustina) em células humanas e sua associação com a resistência de gliomas.
    Juliana Brandstetter Vilar · 2014 · Digital Library of Theses and Dissertations (Universidade de São Paulo)
  89. Effect of T-G and T-T Mismatches of cis-syn Cyclobutane Pyrimidine Dimer on the Thermal Stabilities of DNA Decamer Duplexes
    Hyeong‐Ju Kim · 2008 · Bulletin of the Korean Chemical Society
  90. Role of DNA repair protein ERCC1 in skin cancer
    Liang Song · 2009 · ERA
  91. Cytotoxic, mutagenic and carcinogenic properties of ultraviolet radiation : shining light on photolesions
    Judith J M Jans · 2003 · RePub (Erasmus University Rotterdam)
  92. Defective Solar Protection in Xeroderma Pigmentosum and Cockayne Syndrome Patients
    Colette Aprhys, Daniel Philip Judge · 2006 · Springer eBooks
  93. Risk and prognostic factors for malignant glioma
    Sara Sjöström · 2012 · KTH Publication Database DiVA (KTH Royal Institute of Technology)
  94. Nucleotide excision repair : a multi-step mechanism required to maintain genome integrity
    Jill Moser · 2010 · Leiden Repository (Leiden University)
  95. Mammalian nucleotide excision repair in vivo
    Martijn J. Moné · 2005 · UvA-DARE (University of Amsterdam)
  96. Mecanismos de indução de apoptose pela presença de danos ao DNA: um estudo sobre o papel de p53 na resistência de células de glioma a agentes quimioterápicos.
    Luís F.Z. Batista · 2008 · Digital Library of Theses and Dissertations (Universidade de São Paulo)
  97. The Architecture of Molecular Complexes Involved in UV-damage Recognition
    Ana Janićijević · 2008 · RePub (Erasmus University Rotterdam)
  98. A Microscopic Study of the DNA Damage Response
    Christoffel Dinant · 2008 · RePub (Erasmus University Rotterdam)
  99. Cell cycle regulation of DNA mismatch repair protein expression and activity at the H-ras oncogenic hot spot
    Michael A. Edelbrock · 2007 · OhioLink ETD Center (Ohio Library and Information Network)
  100. REGULATION OF DNA DAMAGE PROCESSING BY COVALENT MODIFICATION OF THYMINE DNA GLYCOSYLASE (Spine title: Regulation of DNA damage processing by thymine DNA glycosylase) (Thesis format: Integrated-Article)
    Ryan D. Mohan · 2010