A Convolutional Neural Network for Automatic Characterization of Plaque Composition in Carotid Ultrasound
Open accessAbstract
Characterization of carotid plaque composition, more specifically the amount of lipid core, fibrous tissue, and calcified tissue, is an important task for the identification of plaques that are prone to rupture, and thus for early risk estimation of cardiovascular and cerebrovascular events. Due to its low costs and wide availability, carotid ultrasound has the potential to become the modality of choice for plaque characterization in clinical practice. However, its significant image noise, coupled with the small size of the plaques and their complex appearance, makes it difficult for automated techniques to discriminate between the different plaque constituents. In this paper, we propose to address this challenging problem by exploiting the unique capabilities of the emerging deep learning framework. More specifically, and unlike existing works which require a priori definition of specific imaging features or thresholding values, we propose to build a convolutional neural network (CNN) that will automatically extract from the images the information that is optimal for the identification of the different plaque constituents. We used approximately 90 000 patches extracted from a database of images and corresponding expert plaque characterizations to train and to validate the proposed CNN. The results of cross-validation experiments show a correlation of about 0.90 with the clinical assessment for the estimation of lipid core, fibrous cap, and calcified tissue areas, indicating the potential of deep learning for the challenging task of automatic characterization of plaque composition in carotid ultrasound.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Most researchers report that their results were consistently improving with an increase in size of training datasets.
“most researchers report that their results were consistently improving with an increase in size of training datasets [58, 59].”
From Deep learning for brain MRI segmentation: state of the art and future directions (2017) · cites this paper as [59]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
ImageNet classification with deep convolutional neural networks
Krizhevsky, A., Sutskever, I., & Hinton, G. E. (2017) · Communications of the ACM · doi:10.1145/3065386 · Cited by 112,155 · see citing works
Adam: A Method for Stochastic Optimization
Kingma, D. P., & Ba, J. (2014) · arXiv · doi:10.48550/arxiv.1412.6980 · Cited by 98,946 · see citing works
LeCun, Y., Bengio, Y., & Hinton, G. (2015) · Nature · doi:10.1038/nature14539 · Cited by 84,126 · see citing works
(2014) · Cited by 33,419 · see citing works
Brain Tumor Segmentation Using Convolutional Neural Networks in MRI Images
Pereira, S., Pinto, A., Alves, V., & Silva, C. A. (2016) · IEEE Transactions on Medical Imaging · doi:10.1109/tmi.2016.2538465 · Cited by 2,735 · see citing works
Universal Definition of Myocardial Infarction: Clinical Insights
Paiva, L., Providencia, R. A., Barra, S., Dinis, P., Faustino, C., & Gonçalves, L. M. M. (2015) · Cardiology · doi:10.1159/000371739 · Cited by 2,513 · see citing works
Probability of stroke: a risk profile from the Framingham Study.
Wolf, P. A., D'Agostino, R. B., Belanger, A. J., & Kannel, W. B. (1991) · Stroke · doi:10.1161/01.str.22.3.312 · Cited by 1,782 · cited 1× · see citing works
“als is carried out thus far by using risk prediction calculators, which combine standard risk factors such as age, smoking, blood pressure, family history, diabetes, and body mass index [3], [4].”
BackgroundLung pattern classification for interstitial lung diseases using a deep convolutional neural network
Anthimopoulos, M., Christodoulidis, S., Ebner, L., Christe, A., & Mougiakakou, S. (2016) · IEEE Transactions on Medical Imaging · doi:10.1109/tmi.2016.2535865 · Cited by 1,343 · see citing works
Concept of Vulnerable/Unstable Plaque
Finn, A. V., Nakano, M., Narula, J., Kolodgie, F. D., & Virmani, R. (2010) · Arteriosclerosis Thrombosis and Vascular Biology · doi:10.1161/atvbaha.108.179739 · Cited by 1,193 · see citing works
Automatic Segmentation of MR Brain Images With a Convolutional Neural Network
Moeskops, P., Viergever, M. A., Mendrik, A. M., de Vries, L. S., Benders, M. J. N. L., & Isgum, I. (2016) · IEEE Transactions on Medical Imaging · doi:10.1109/tmi.2016.2548501 · Cited by 861 · see citing works
Deep convolutional neural networks for multi-modality isointense infant brain image segmentation
Zhang, W., Li, R., Deng, H., Wang, L., Lin, W., Ji, S., & Shen, D. (2015) · NeuroImage · doi:10.1016/j.neuroimage.2014.12.061 · Cited by 817 · see citing works
AggNet: Deep Learning From Crowds for Mitosis Detection in Breast Cancer Histology Images
Albarqouni, S., Baur, C., Achilles, F., Belagiannis, V., Demirci, S., & Navab, N. (2016) · IEEE Transactions on Medical Imaging · doi:10.1109/tmi.2016.2528120 · Cited by 606 · see citing works
Unsupervised Deep Learning Applied to Breast Density Segmentation and Mammographic Risk Scoring
Kallenberg, M., Petersen, K., Nielsen, M., Ng, A. Y., Diao, P., Igel, C., Vachon, C. M., Holland, K., Winkel, R. R., Karssemeijer, N., et al. (2016) · IEEE Transactions on Medical Imaging · doi:10.1109/tmi.2016.2532122 · Cited by 439 · see citing works
Ciompi, F., de Hoop, B., van Riel, S. J., Chung, K., Scholten, E. T., Oudkerk, M., de Jong, P. A., Prokop, M., & Ginneken, B. V. (2015) · Medical Image Analysis · doi:10.1016/j.media.2015.08.001 · Cited by 289 · see citing works
Lorenz, M. W., Schaefer, C., Steinmetz, H., & Sitzer, M. (2010) · European Heart Journal · doi:10.1093/eurheartj/ehq189 · Cited by 231 · see citing works
Lal, B. K., Hobson, R. W., Pappas, P. J., Kubicka, R., Hameed, M., Chakhtura, E. Y., Jamil, Z., Padberg, F. T., Haser, P. B., & Durán, W. N. (2002) · Journal of Vascular Surgery · doi:10.1067/mva.2002.122888 · Cited by 229 · see citing works
Hippisley‐Cox, J., Coupland, C. A. C., Vinogradova, Y., Robson, J. P., & Brindle, P. M. (2007) · Heart · doi:10.1136/hrt.2007.134890 · Cited by 226 · see citing works
Vancraeynest, D., Pasquet, A., Roelants, V., Gerber, B. L., & Vanoverschelde, J. (2011) · Journal of the American College of Cardiology · doi:10.1016/j.jacc.2011.02.018 · Cited by 174 · see citing works
The Vulnerable Atherosclerotic Plaque: Scope of the Literature
Alsheikh-Ali, A. A. A., Kitsios, G. D., Balk, E. M., Lau, J. W. Y., & Ip, S. (2010) · Annals of Internal Medicine · doi:10.7326/0003-4819-153-6-201009210-00272 · Cited by 114 · see citing works
In vivo radiofrequency-based ultrasonic tissue characterization of the atherosclerotic plaque.
Urbani, M. P., Picano, E., Parenti, G. F., et al. (1993) · Stroke · doi:10.1161/01.str.24.10.1507 · Cited by 107 · see citing works
Vulnerable Plaque: Definition, Diagnosis, and Treatment
Moreno, P. (2009) · Cardiology Clinics · doi:10.1016/j.ccl.2009.09.008 · Cited by 103 · see citing works
Itskovich, V. V., Samber, D. D., Mani, V., et al. (2004) · Magnetic Resonance in Medicine · doi:10.1002/mrm.20154 · Cited by 79 · see citing works
Hashimoto, H., Tagaya, M., Niki, H., et al. (2009) · Cerebrovascular Diseases · doi:10.1159/000229554 · Cited by 57 · see citing works
Clarke, S. E., Beletsky, V., Hammond, R. R., et al. (2005) · Stroke · doi:10.1161/01.str.0000196985.38701.0c · Cited by 55 · see citing works
Madycki, G., Staszkiewicz, W., & Gabrusiewicz, A. (2006) · European Journal of Vascular and Endovascular Surgery · doi:10.1016/j.ejvs.2005.10.010 · Cited by 51 · see citing works
Quantification of atherosclerotic plaque components using in vivo MRI and supervised classifiers
Hofman, J. M. A., Branderhorst, W., ten Eikelder, H. M. M., Cappendijk, V. C., Heeneman, S., Kooi, M. E., Hilbers, P. A. J., & Romeny, B. M. T. H. (2006) · Magnetic Resonance in Medicine · doi:10.1002/mrm.20828 · Cited by 51 · see citing works
Fan, Z., Yu, W., Xie, Y., et al. (2014) · Journal of Cardiovascular Magnetic Resonance · doi:10.1186/s12968-014-0053-5 · Cited by 48 · see citing works
Automated Versus Manual In Vivo Segmentation of Carotid Plaque MRI
Klooster, R. V. ’., Naggara, O. N., Marsico, R., Reiber, J. H. C., Méder, J.-F., van der Geest, R. J., Touzé, E., & Oppenheim, C. (2012) · American Journal of Neuroradiology · doi:10.3174/ajnr.a3028 · Cited by 40 · see citing works
Pixel-Level Tissue Classification for Ultrasound Images
Pazinato, D. V., Stein, B. V., de Almeida, W. R., et al. (2014) · IEEE Journal of Biomedical and Health Informatics · doi:10.1109/jbhi.2014.2386796 · Cited by 37 · see citing works
van Engelen, A., Niessen, W. J., Klein, S., et al. (2014) · PLoS ONE · doi:10.1371/journal.pone.0094840 · Cited by 29 · see citing works
Segmentation of carotid plaque using multicontrast 3D gradient echo MRI
Liu, W., Balu, N., Sun, J., et al. (2011) · Journal of Magnetic Resonance Imaging · doi:10.1002/jmri.22886 · Cited by 29 · see citing works
Sakellarios, A. I., Stefanou, K., Siogkas, P. K., et al. (2012) · Magnetic Resonance Imaging · doi:10.1016/j.mri.2012.03.004 · Cited by 26 · see citing works
Yoneyama, T., Sun, J., Hippe, D. S., et al. (2015) · International journal of cardiac imaging · doi:10.1007/s10554-015-0704-0 · Cited by 19 · see citing works
Gao, S., Klooster, R. V. ’., van Wijk, D. F., Nederveen, A. J., Lelieveldt, B. P. F., & van der Geest, R. J. (2015) · Magnetic Resonance Materials in Physics Biology and Medicine · doi:10.1007/s10334-015-0495-2 · Cited by 18 · see citing works
Pitfalls in Carotid Ultrasound Diagnosis
Hashimoto, B. E. (2011) · Ultrasound Clinics · doi:10.1016/j.cult.2011.08.006 · Cited by 6 · see citing works
Crişan, S. (2011) · PubMed · Cited by 4 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
A survey on deep learning in medical image analysis
Litjens, G., Kooi, T., Bejnordi, B. E., Setio, A. A. A., Ciompi, F., Ghafoorian, M., van der Laak, J. A. W. M., van Ginneken, B., & Sánchez, C. I. (2017) · Medical Image Analysis · doi:10.1016/j.media.2017.07.005 · Cited by 15,332 · see citing works
Deep learning for brain MRI segmentation: state of the art and future directions
Akkus, Z., Galimzianova, A., Hoogi, A., Rubin, D. L., & Erickson, B. J. (2017) · Journal of Digital Imaging · doi:10.1007/s10278-017-9983-4 · Cited by 1,129 · see citing works
Self-citationDeep Learning in Medical Ultrasound Analysis: A Review
Liu, S., Wang, Y., Yang, X., Lei, B., Liu, L., Li, S. X., Ni, D., & Wang, T. (2019) · Engineering · doi:10.1016/j.eng.2018.11.020 · Cited by 798 · see citing works
AI in Medical Imaging Informatics: Current Challenges and Future Directions
Panayides, A. S., Amini, A., Filipovic, N. D., Sharma, A., Tsaftaris, S. A., Young, A., Foran, D., Do, N., Golemati, S., Kurc, T., et al. (2020) · IEEE Journal of Biomedical and Health Informatics · doi:10.1109/jbhi.2020.2991043 · Cited by 713 · see citing works
Economics of artificial intelligence in healthcare: Diagnosis vs. treatment
Khanna, N. N., Maindarkar, M. A., Viswanathan, V., Fernandes, J. F. E., Paul, S., Bhagawati, M., Ahluwalia, P., Ruzsa, Z., Sharma, A., Kolluri, R., et al. (2022) · Healthcare · doi:10.3390/healthcare10122493 · Cited by 347 · see citing works
Machine learning for medical ultrasound: status, methods, and future opportunities
Brattain, L. J., Telfer, B. A., Dhyani, M., Grajo, J. R., & Samir, A. E. (2018) · Abdominal Radiology · doi:10.1007/s00261-018-1517-0 · Cited by 262 · see citing works
Using deep-learning algorithms to classify fetal brain ultrasound images as normal or abnormal
Xie, H. N., Wang, N., He, M., Zhang, L. H., Cai, H. M., Xian, J. B., Lin, M. F., Zheng, J., & Yang, Y. Z. (2020) · Ultrasound in Obstetrics & Gynecology · doi:10.1002/uog.21967 · Cited by 176 · see citing works
Applications of Artificial Intelligence in Cardiology. The Future is Already Here
Dorado-Díaz, P. I., Sampedro-Gómez, J., Vicente-Palacios, V., & Sánchez, P. L. (2019) · Revista Española de Cardiología (English Edition) · doi:10.1016/j.rec.2019.05.014 · Cited by 111 · see citing works
- Authors
- Lekadir, K., Galimzianova, A., Betriu, A., del Mar Vila, M., Igual, L., Rubin, D. L., Fernandez, E., Radeva, P., & Napel, S.
- Affiliations
- Stanford Medicine (US)
- Computer Vision Center (ES)
- Corresponding author
- Lekadir, Karim
- Venue
- IEEE Journal of Biomedical and Health Informatics
- Published
- 2017-01
- Volume
- 21
- Issue
- 1
- Pages
- 48-55
- ISSN
- 2168-2194 (ISSN-L)
- 2168-2208
- PMC
- PMC5293622
- OpenAlex
- W2551562422
- Cited by
- 212
- References
- 36
- Citations by year
- 2026: 11 · 2025: 15 · 2024: 16 · 2023: 27 · 2022: 36 · 2021: 30 · 2020: 30 · 2019: 21 · 2018: 16 · 2017: 8
- FWCI
- 13.31
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- IEEE Journal of Biomedical and Health Informatics (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Marie-Curie Actions Program of the European Union ((FP7/2007-2013))
- REA (600388)
- NIH (U01CA142555, 1U01CA190214, CA160251, U01 CA187947)
- NVIDIA
- FIS (CP12/03287, RD12/0042/0061)
- European Regions Development
- ICREA
- Topics
- Health Sciences › Medicine › Pulmonary and Respiratory Medicine › Cerebrovascular and Carotid Artery Diseases
- Physical Sciences › Computer Science › Computer Vision and Pattern Recognition › Medical Image Segmentation Techniques
- Physical Sciences › Computer Science › Artificial Intelligence › AI in cancer detection
- Keywords
- carotid plaque composition, carotid ultrasound, convolutional neural networks, lipid core, fibrous cap, calcified tissues, plaque rupture risk, image patches, deep learning for medical imaging
- MeSH terms
- Carotid Arteries, Carotid Artery Diseases, Humans, Image Processing, Computer-Assisted, Ultrasonography, Neural Networks, Computer, Plaque, Atherosclerotic
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review