Ascertaining the Importance of Neurons to Develop Better Brain-Machine Interfaces
Abstract
In the design of brain-machine interface (BMI) algorithms, the activity of hundreds of chronically recorded neurons is used to reconstruct a variety of kinematic variables. A significant problem introduced with the use of neural ensemble inputs for model building is the explosion in the number of free parameters. Large models not only affect model generalization but also put a computational burden on computing an optimal solution especially when the goal is to implement the BMI in low-power, portable hardware. In this paper, three methods are presented to quantitatively rate the importance of neurons in neural to motor mapping, using single neuron correlation analysis, sensitivity analysis through a vector linear model, and a model-independent cellular directional tuning analysis for comparisons purpose. Although, the rankings are not identical, up to sixty percent of the top 10 ranking cells were in common. This set can then be used to determine a reduced-order model whose performance is similar to that of the ensemble. It is further shown that by pruning the initial ensemble neural input with the ranked importance of cells, a reduced sets of cells (between 40 and 80, depending upon the methods) can be found that exceed the BMI performance levels of the full ensemble.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Multiplexing a high-density electrode array to a smaller amplifier array is a widely used resource-sharing technique that relies on not all electrode sites providing useful information after implantation or on necessary information being obtainable from a small subset, although the useful subset is not known in advance.
“The first widely used technique consists of multiplexing a high-density electrode array to a much smaller amplifier array. This strategy leverages the fact that not all electrode sites may provide useful information after implantation [97, 101, 145] or that the necessary information can be obtained from a small subset of electrodes, although the useful electrode subset is not known a priori [118].”
From Implantable neurotechnologies: a review of integrated circuit neural amplifiers (2016) · cites this paper as [118]
Cites
A new look at the statistical model identification
Akaike, H. (1974) · IEEE Transactions on Automatic Control · doi:10.1109/tac.1974.1100705 · Cited by 51,879 · see citing works
Rogers, S. (1996) · Control Engineering Practice · doi:10.1016/0967-0661(96)82838-3 · Cited by 10,013 · see citing works
Spline Models for Observational Data.
Müller, H., & Wahba, G. (1991) · Journal of the American Statistical Association · doi:10.2307/2290434 · Cited by 4,992 · see citing works
Spline Models for Observational Data
Wahba, G. (1990) · doi:10.1137/1.9781611970128 · Cited by 4,184 · see citing works
Neural Networks and the Bias/Variance Dilemma
Geman, S., Bienenstock, E., & Doursat, R. (1992) · Neural Computation · doi:10.1162/neco.1992.4.1.1 · Cited by 3,578 · see citing works
Neuronal Population Coding of Movement Direction
Georgopoulos, A. P., Schwartz, A. B., & Kettner, R. E. (1986) · Science · doi:10.1126/science.3749885 · Cited by 3,187 · see citing works
Georgopoulos, A. P., Kalaska, J. F., Caminiti, R., & Massey, J. (1982) · Journal of Neuroscience · doi:10.1523/jneurosci.02-11-01527.1982 · Cited by 2,133 · see citing works
Adaptive filter theory (2nd ed.)
Haykin, S. (1991) · Prentice-Hall, Inc eBooks · Cited by 1,905 · see citing works
Learning to control a brain–machine interface for reaching and grasping by primates
Carmena, J. M., Lebedev, M. A., Crist, R. E., O'Doherty, J. E., Santucci, D. M., Dimitrov, D. F., Patil, P. G., Henriquez, C. S., & Nicolelis, M. A. L. (2003) · PLoS Biology · doi:10.1371/journal.pbio.0000042 · Cited by 1,761 · see citing works
Self-citationJammalamadaka, S., & SenGupta, A. (2001) · Series on multivariate analysis · doi:10.1142/4031 · Cited by 1,655 · see citing works
Direct Cortical Control of 3D Neuroprosthetic Devices
Taylor, D. M., Tillery, S. I. H., & Schwartz, A. B. (2002) · Science · doi:10.1126/science.1070291 · Cited by 1,542 · see citing works
Real-time prediction of hand trajectory by ensembles of cortical neurons in primates
Wessberg, J., Stambaugh, C. R., Kralik, J. D., Beck, P. D., Laubach, M., Chapin, J. K., Kim, J., Biggs, S. J., Srinivasan, M. A., & Nicolelis, M. A. L. (2000) · Nature · doi:10.1038/35042582 · Cited by 1,491 · see citing works
Self-citationInstant neural control of a movement signal
Serruya, M. D., Hatsopoulos, N. G., Paninski, L., Fellows, M. R., & Donoghue, J. P. (2002) · Nature · doi:10.1038/416141a · Cited by 1,415 · see citing works
Real-time control of a robot arm using simultaneously recorded neurons in the motor cortex
Chapin, J. K., Moxon, K. A., Markowitz, R. S., & Nicolelis, M. A. L. (1999) · Nature Neuroscience · doi:10.1038/10223 · Cited by 1,168 · see citing works
Self-citationMental Rotation of the Neuronal Population Vector
Georgopoulos, A. P., Lurito, J. T., Petrides, M., Schwartz, A. B., & Massey, J. T. (1989) · Science · doi:10.1126/science.2911737 · Cited by 910 · see citing works
Motor Cortical Representation of Speed and Direction During Reaching
Moran, D. W., & Schwartz, A. B. (1999) · Journal of Neurophysiology · doi:10.1152/jn.1999.82.5.2676 · Cited by 813 · see citing works
Chronic, multisite, multielectrode recordings in macaque monkeys
Nicolelis, M. A. L., Dimitrov, D., Carmena, J. M., Crist, R., Lehew, G., Kralik, J. D., & Wise, S. P. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1934665100 · Cited by 740 · see citing works
Self-citationDirect control of a computer from the human central nervous system
Kennedy, P. R., Bakay, R. A. E., Moore, M. M., Adams, K. D., & Goldwaithe, J. (2000) · IEEE Transactions on Rehabilitation Engineering · doi:10.1109/86.847815 · Cited by 573 · see citing works
Schwartz, A. B., & Moran, D. W. (1999) · Journal of Neurophysiology · doi:10.1152/jn.1999.82.5.2705 · Cited by 330 · see citing works
Fu, Q., Flament, D., Coltz, J. D., & Ebner, T. J. (1995) · Journal of Neurophysiology · doi:10.1152/jn.1995.73.2.836 · Cited by 312 · see citing works
Are movement parameters recognizably coded in the activity of single neurons
Fetz, E. E. (1992) · Behavioral and Brain Sciences · doi:10.1017/s0140525x00072599 · Cited by 312 · see citing works
Extraction algorithms for cortical control of arm prosthetics
Schwartz, A. B., Taylor, D. M., & Tillery, S. I. H. (2001) · Current Opinion in Neurobiology · doi:10.1016/s0959-4388(01)00272-0 · Cited by 148 · see citing works
Motor Cortical Activity During Drawing Movements: Population Representation During Spiral Tracing
Moran, D. W., & Schwartz, A. B. (1999) · Journal of Neurophysiology · doi:10.1152/jn.1999.82.5.2693 · Cited by 141 · see citing works
Black-box models from input-output measurements
Ljung, L. (2002) · doi:10.1109/imtc.2001.928802 · Cited by 116 · see citing works
Kim, S.-P., Sanchez, J. C., Deniz Erdogmus, B., Rao, Y. N., Wessberg, J., Príncipe, J. C., & Nicolelis, M. A. L. (2003) · Neural Networks · doi:10.1016/s0893-6080(03)00108-4 · Cited by 66 · see citing works
Self-citationSanchez, J. C., Kim, S.-P., Erdoğmuş, D., et al. (2003) · doi:10.1109/nnsp.2002.1030025 · Cited by 63 · see citing works
Self-citationInferring Hand Motion from Multi-Cell Recordings in Motor Cortex using a Kalman Filter
Wu, W., Black, M. J., Gao, Y., et al. (2002) · Cited by 56 · see citing works
Gao, Y., Black, M. J., Bienenstock, E., et al. (2003) · International IEEE/EMBS Conference on Neural Engineering · doi:10.1109/cne.2003.1196789 · Cited by 55 · see citing works
Are movement parameters recognizably coded in the activity of single neurons?
Fetz, E. E. (1994) · Cambridge University Press eBooks · doi:10.1017/cbo9780511529788.008 · Cited by 47 · see citing works
Sanchez, J. C., Erdoğmuş, D., Rao, Y., et al. (2003) · International IEEE/EMBS Conference on Neural Engineering · doi:10.1109/cne.2003.1196755 · Cited by 27 · see citing works
Self-citationInterpreting neural activity through linear and nonlinear models for brain machine interfaces
Sanchez, J. C., Deniz Erdogmus, B., Rao, Y., Kim, S.-P., Nicolelis, M. A. L., Wessberg, J., & Príncipe, J. C. (2004) · Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) · doi:10.1109/iembs.2003.1280168 · Cited by 15 · see citing works
Self-citation
Flagged first, then by citations
Cited by
Sorted by citations
Brain–machine interfaces: past, present and future
Lebedev, M. A., & Nicolelis, M. A. L. (2006) · Trends in Neurosciences · doi:10.1016/j.tins.2006.07.004 · Cited by 1,875 · see citing works
Self-citationA high-performance neural prosthesis enabled by control algorithm design
Gilja, V., Nuyujukian, P., Chestek, C. A., Cunningham, J. P., Yu, B. M., Fan, J. M., Churchland, M. M., Kaufman, M. T., Kao, J. C., Ryu, S. I., et al. (2012) · Nature Neuroscience · doi:10.1038/nn.3265 · Cited by 564 · see citing works
Implantable neurotechnologies: a review of integrated circuit neural amplifiers
Ng, K. A., Greenwald, E., Xu, Y. P., & Thakor, N. V. (2016) · Medical & Biological Engineering & Computing · doi:10.1007/s11517-015-1431-3 · Cited by 83 · see citing works
- Authors
- Sanchez, J. C., Carmena, J. M., Lebedev, M. A., Nicolelis, M. A. L., Harris, J. G., & Principe, J. C.
- Affiliations
- University of Florida (US)
- Duke University (US)
- Venue
- IEEE Transactions on Biomedical Engineering
- Published
- 2004-06
- Volume
- 51
- Issue
- 6
- Pages
- 943-953
- ISSN
- 0018-9294 (ISSN-L)
- OpenAlex
- W2103554020
- Cited by
- 111
- References
- 31
- Citations by year
- 2025: 1 · 2020: 2 · 2019: 6 · 2018: 3 · 2017: 2 · 2016: 5 · 2015: 7 · 2014: 9 · 2013: 6 · 2012: 6
- FWCI
- 6.38
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- IEEE Transactions on Biomedical Engineering (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Universidade de São Paulo
- Topics
- Life Sciences › Neuroscience › Cognitive Neuroscience › EEG and Brain-Computer Interfaces
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neural Engineering
- Physical Sciences › Engineering › Biomedical Engineering › Muscle activation and electromyography studies
- Keywords
- brain-computer interface, model reduction, sensitivity analysis, model generalization, low-power electronics
- MeSH terms
- Action Potentials, Algorithms, Animals, Cerebral Cortex, Computer Simulation, Electroencephalography, Female, Hand, Macaca, Models, Neurological, Movement, Nerve Net, Neurons, Sensitivity and Specificity, Signal Processing, Computer-Assisted, User-Computer Interface, Reproducibility of Results, Models, Statistical, Likelihood Functions
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review