Cited by 5Bacterial Genetics and BiotechnologyEvolution and Genetic DynamicsBacteriophages and microbial interactions

Role of natural transformation in the evolution of small cryptic plasmids in Synechocystis sp. PCC 6803

Open access
Nies, Fabian, Wein, Tanita, Hanke, Dustin M., Springstein, Benjamin L., Alcorta, Jaime, Taubenheim, Claudia, Dagan, Tal·2023·Environmental Microbiology Reports

Abstract

Small cryptic plasmids have no clear effect on the host fitness and their functional repertoire remains obscure. The naturally competent cyanobacterium Synechocystis sp. PCC 6803 harbours several small cryptic plasmids; whether their evolution with this species is supported by horizontal transfer remains understudied. Here, we show that the small cryptic plasmid DNA is transferred in the population exclusively by natural transformation, where the transfer frequency of plasmid-encoded genes is similar to that of chromosome-encoded genes. Establishing a system to follow gene transfer, we compared the transfer frequency of genes encoded in cryptic plasmids pCA2.4 (2378 bp) and pCB2.4 (2345 bp) within and between populations of two Synechocystis sp. PCC 6803 labtypes (termed Kiel and Sevilla). Our results reveal that plasmid gene transfer frequency depends on the recipient labtype. Furthermore, gene transfer via whole plasmid uptake in the Sevilla labtype ranged among the lowest detected transfer rates in our experiments. Our study indicates that horizontal DNA transfer via natural transformation is frequent in the evolution of small cryptic plasmids that reside in naturally competent organisms. Furthermore, we suggest that the contribution of natural transformation to cryptic plasmid persistence in Synechocystis is limited.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1111/1758-2229.13203

Cites

73 of 73 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Synechocystis sp. PCC 6803 is particularly valued for its innate competence for DNA uptake, facilitating the introduction of exogenous DNA into its genome via homologous recombination.

    “This unicellular freshwater cyanobacterium is particularly valued for its innate competence for DNA uptake, facilitating the introduction of exogenous DNA into its genome via homologous recombination [54].”

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 1

  1. Vakeria, D., Fewson, C.A. & Vivian, A. (1985) Gene transfer in Acinetobacter calcoaceticus NCIB8250. FEMS Microbiology Letters, 26, 141– 145.

Cited by

Sorted by citations

Authors
Nies, F., Wein, T., Hanke, D. M., Springstein, B. L., Alcorta, J., Taubenheim, C., & Dagan, T.
Affiliations
  • Christian-Albrechts-Universität zu Kiel (DE)
  • Pontificia Universidad Católica de Chile (CL)
Corresponding author
  • Nies, Fabian
  • Dagan, Tal
Venue
Environmental Microbiology Reports
Publisher
Wiley
Published
2023-10-04
Volume
15
Issue
6
Pages
656-668
ISSN
1758-2229 (ISSN-L)
OpenAlex
W4387357451
Cited by
5
References
73
Citations by year
2026: 1 · 2025: 1 · 2024: 3
FWCI
0.82
Type
journal article
Language
en
Open access
Locations
  • Environmental Microbiology Reports (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • Multimedialen Archiv und Publikationsserver der Christian-Albrechts-Universität zu Kiel (Christian-Albrechts-Universität zu Kiel) (submittedVersion, cc-by)
Funders
  • Agencia Nacional de Investigación y Desarrollo (21191763)
  • Deutsche Forschungsgemeinschaft (456882089, RTG2501)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
  • Physical Sciences › Environmental Science › Ecology › Bacteriophages and microbial interactions
Keywords
natural transformation, cryptic plasmid, Synechocystis sp. PCC 6803, horizontal gene transfer, plasmid evolution, plasmid persistence, plasmid transfer frequency, cyanobacteria
MeSH terms
DNA, Plasmids, Synechocystis

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review