Cited by 15,390Genomics and Phylogenetic StudiesRNA Research and SplicingGenomics and Chromatin Dynamics

Integrative genomics viewer

Open access
Robinson, James T, Thorvaldsdóttir, Helga, Winckler, Wendy, Guttman, Mitchell, Lander, Eric S, Getz, Gad, Mesirov, Jill P·2011·Nature Biotechnology

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1038/nbt.1754

Cites

14 of 14 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Strain S has a single non-synonymous nucleotide polymorphism in RCA1 yielding a truncated Rca1Y110* variant lacking the essential bZIP region.

    “Indeed, using IGV tool (version 2.16.2)27, we discovered a single non-synonymous nucleotide polymorphism RCA1, yielding a truncated Rca1Y110* variant lacking a the essential bZIP region.”
  • All 198 attempted experimental validations of de novo mutations in the novel genes confirmed them as de novo mutations.

    “all these DNMs were inspected in IGV10 and, of 198 for which experimental validation was attempted, all were confirmed as DNMs.”
  • Variant sequences were verified by next-generation sequencing and manual inspection.

    “To verify the sequences of variants, next-generation sequencing libraries were prepared according to a low-volume Nextera sequencing protocol 43 and sequenced on the Illumina Miseq platform (single-end mode with 50 bp R1).”

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 1

  1. [12]Lewis SE Genome Biol 3 2002 RESEARCH0082.1–0082.14 PMC151190 12537577

Cited by

Sorted by citations

Authors
Robinson, J. T., Thorvaldsdóttir, H., Winckler, W., Guttman, M., Lander, E. S., Getz, G., & Mesirov, J. P.
Affiliations
Broad Institute (US)
Corresponding author
  • Robinson, James T
  • Mesirov, Jill P
Venue
Nature Biotechnology
Published
2011-01
Volume
29
Issue
1
Pages
24-26
ISSN
  • 0733-222X (ISSN-L)
  • 1087-0156
  • 1546-1696
OpenAlex
W2021341670
Cited by
15,390
References
14
Citations by year
2026: 1154 · 2025: 1531 · 2024: 1711 · 2023: 1498 · 2022: 1515 · 2021: 1605 · 2020: 1370 · 2019: 1013 · 2018: 915 · 2017: 804 · 2016: 694 · 2015: 503 · 2014: 398 · 2013: 360 · 2012: 226
FWCI
137.77
Type
journal article
Language
en
Open access
Locations
  • Nature Biotechnology (publishedVersion)
  • PubMed (publishedVersion)
  • Europe PMC (PubMed Central) (acceptedVersion)
  • PubMed Central (acceptedVersion)
  • DSpace@MIT (Massachusetts Institute of Technology) (submittedVersion, cc-by-nc-sa)
  • CaltechAUTHORS (California Institute of Technology) (submittedVersion)
  • PMC
Funders
  • National Human Genome Research Institute (U54HG003067)
  • National Cancer Institute (R21CA135827)
  • National Institute of General Medical Sciences (R01GM074024)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
Keywords
genome browser, genome visualization, data visualization tools
MeSH terms
Chromosome Mapping, Computer Graphics, Glioblastoma, Humans, Neoplasms, Online Systems, Software, Information Storage and Retrieval, Gene Dosage, Computational Biology, Internet, Oligonucleotide Array Sequence Analysis, Polymorphism, Single Nucleotide, Gene Expression Profiling, Genomics

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review