Cited by 24Bacterial Genetics and BiotechnologyEscherichia coli research studiesBiochemical and Structural Characterization

Fluoresceination of FepA during colicin B killing: effects of temperature, toxin and TonB

Open access
Smallwood, Chuck R., Marco, Amparo Gala, Xiao, Qiaobin, Trinh, Vy, Newton, Salete M. C., Klebba, Phillip E.·2009·Molecular Microbiology

Abstract

Summary: We studied the reactivity of 35 genetically engineered Cys sulphydryl groups at different locations in Escherichia coli FepA. Modification of surface loop residues by fluorescein maleimide (FM) was strongly temperature‐dependent in vivo, whereas reactivity at other sites was much less affected. Control reactions with bovine serum albumin showed that the temperature dependence of loop residue reactivity was unusually high, indicating that conformational changes in multiple loops (L2, L3, L4, L5, L7, L8, L10) transform the receptor to a more accessible form at 37°C. At 0°C colicin B binding impaired or blocked labelling at 8 of 10 surface loop sites, presumably by steric hindrance. Overall, colicin B adsorption decreased the reactivity of more than half of the 35 sites, in both the N‐ and C‐ domains of FepA. However, colicin B penetration into the cell at 37°C did not augment the chemical modification of any residues in FepA. The FM modification patterns were similarly unaffected by the tonB locus. FepA was expressed at lower levels in a tonB host strain, but when we accounted for this decrease its FM labelling was comparable whether TonB was present or absent. Thus we did not detect TonB‐dependent structural changes in FepA, either alone or when it interacted with colicin B at 37°C. The only changes in chemical modification were reductions from steric hindrance when the bacteriocin bound to the receptor protein. The absence of increases in the reactivity of N‐domain residues argues against the idea that the colicin B polypeptide traverses the FepA channel.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1111/j.1365-2958.2009.06715.x

Cites

58 of 58 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 3

  1. Buchanan SK Smith BS Venkatramani L Xia D Esser L Palnitkar M Chakraborty R van der Helm D Deisenhofer J Nat Struct Biol 1999 6 56 63 9886293
  2. Davies JK Reeves P J Bacteriol 1975 123 96 101 124727 PMC235695
  3. Luria SE Ann Inst Pasteur (Paris) 1964 107 SUPPL 67 73 14240526

Cited by

Sorted by citations

Authors
Smallwood, C. R., Marco, A. G., Xiao, Q., Trinh, V., Newton, S. M. C., & Klebba, P. E.
Affiliations
University of Oklahoma (US)
Corresponding author
Klebba, Phillip E.
Venue
Molecular Microbiology
Publisher
Wiley
Published
2009-05-22
Volume
72
Issue
5
Pages
1171-1180
ISSN
  • 0950-382X (ISSN-L)
  • 1365-2958
OpenAlex
W2136538003
Cited by
24
References
58
Citations by year
2026: 1 · 2024: 1 · 2022: 1 · 2021: 1 · 2020: 1 · 2017: 2 · 2016: 1 · 2014: 4 · 2013: 3 · 2012: 2
FWCI
1.75
Type
journal article
Language
en
Open access
Locations
  • Molecular Microbiology (publishedVersion)
  • PubMed (publishedVersion)
  • Europe PMC (PubMed Central) (acceptedVersion)
  • PubMed Central (acceptedVersion)
Funders
  • National Institutes of Health
  • National Institute of General Medical Sciences (GM 53836, R01GM053836)
  • Division of Molecular and Cellular Biosciences
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Endocrinology › Escherichia coli research studies
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Biochemical and Structural Characterization
Keywords
FepA, colicin B, TonB, Escherichia coli, temperature-dependent conformational change, steric hindrance, toxin binding, TonB-dependent receptors
MeSH terms
Bacterial Outer Membrane Proteins, Carrier Proteins, Colicins, Escherichia coli, Fluoresceins, Fluorescence, Membrane Proteins, Protein Binding, Receptors, Cell Surface, Temperature, Mutagenesis, Site-Directed, Protein Transport, Escherichia coli Proteins

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review