Microbial diversity in chronic open wounds
Abstract
Chronic wounds expose the dermal matrix and underlying tissue to a diversity of microbes from the body and surrounding environment. We determined the microbial diversity of 19 chronic wounds using both molecular methods (sequence analysis of rRNA genes) and routine clinical culturing methods using swab samples. We identified 93 phylotypes in 2,653 rRNA clone sequences and found that compared with other environments, the microbial diversity of chronic wounds is relatively well characterized, i.e., 95% of sequences have ≥97% identity with known human commensals. In total, 75% of sequences belonged to four well‐known wound‐associated phylotypes: Staphylococcus (25%), Corynebacterium (20%), Clostridiales (18%), and Pseudomonas (12%). Approximately 0.5% of sequences (seven phylotypes) belonged to potentially new species. Individual wound samples contained four to 22 phylotypes, but in all wounds only a few (one to three) phylotypes were dominant. In more than half the wound specimens, polymerase chain reaction and culturing methods gave different diversity and dominance information about the microbes present. This exploratory study suggests that combining molecular and culturing methods provides a more complete characterization of the microbial diversity of chronic wounds, and can thereby expand our understanding of how microbiology impacts chronic wound pathology and healing.
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Continued presence of a high bacterial load in wounds results in a sustained influx of pro-inflammatory cells and increased inflammation, leading to delayed healing.
“In addition, continued presence of a high bacterial load in wounds results in a sustained influx of pro-inflammatory cells and increased inflammation also leading to delayed healing (Fig. 3) (33-35).”
From Wound repair and regeneration: Mechanisms, signaling, and translation (2014) · cites this paper as [34]
Multiple studies have emphasized the presence of bacteria and the polymicrobial nature of chronic, non-healing wounds, and the frequency of S. aureus and P. aeruginosa organisms has been shown to be exceedingly high.
“Multiple studies have also emphasized the presence of bacteria and the polymicrobial nature of chronic, non-healing wounds [6], [7], [8], [9], [10], and the frequency of S. aureus and P. aeruginosa organisms has been shown to be exceedingly high [10], [11], [12], [13], [14].”
From Interactions of Methicillin Resistant Staphylococcus aureus USA300 and Pseudomonas aeruginosa in Polymicrobial Wound Infection (2013) · cites this paper as [6]
The polymicrobial nature of non-healing wounds, such as venous, pressure, and diabetic foot ulcers, is well documented and established.
“The polymicrobial nature of non-healing wounds, such as venous, pressure, and diabetic foot ulcers is well documented and established [6], [7], [8], [9], [58], [59].”
From Interactions of Methicillin Resistant Staphylococcus aureus USA300 and Pseudomonas aeruginosa in Polymicrobial Wound Infection (2013) · cites this paper as [6]
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- Authors
- Frank, D. N., Wysocki, A., Specht‐Glick, D. D., Rooney, A., Feldman, R. A., St. Amand, A. L., Pace, N. R., & Trent, J. D.
- Affiliations
- University of Colorado Boulder (US)
- University of Mississippi Medical Center (US)
- St. Patrick Hospital (US)
- United States Department of Agriculture (US)
- Ames Research Center (US)
- Corresponding author
- Trent, Jonathan D.
- Venue
- Wound Repair and Regeneration
- Publisher
- Wiley
- Published
- 2009-03
- Volume
- 17
- Issue
- 2
- Pages
- 163-172
- ISSN
- 1067-1927 (ISSN-L)
- 1524-475X
- OpenAlex
- W2096282426
- Cited by
- 123
- References
- 38
- Citations by year
- 2026: 2 · 2025: 4 · 2024: 9 · 2023: 8 · 2022: 7 · 2021: 4 · 2020: 9 · 2019: 6 · 2018: 8 · 2017: 5 · 2016: 8 · 2015: 3 · 2014: 14 · 2013: 9 · 2012: 8
- FWCI
- 8.82
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Wound Repair and Regeneration (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health
- Defense Advanced Research Projects Agency
- Topics
- Health Sciences › Medicine › Rehabilitation › Wound Healing and Treatments
- Physical Sciences › Environmental Science › Ecology › Microbial Community Ecology and Physiology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Keywords
- chronic wounds, wound microbiota, microbial diversity, rRNA gene sequencing, Staphylococcus, Corynebacterium, Clostridiales, Pseudomonas, novel bacterial species, wound healing
- MeSH terms
- Adult, Aged, Aged, 80 and over, Bacterial Infections, Chronic Disease, Clostridium Infections, Corynebacterium Infections, Female, Humans, Male, Middle Aged, Mississippi, Montana, Phylogeny, Pseudomonas Infections, RNA, Bacterial, Staphylococcal Infections, Genetic Variation, Wound Infection, Bacterial Typing Techniques, Comorbidity, Polymerase Chain Reaction, Sequence Analysis, RNA
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