Cited by 1,287Genetic and phenotypic traits in livestockGenomics and Phylogenetic StudiesChromosomal and Genetic Variations

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The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution

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The Bovine Genome Sequencing and Analysis Consortium, Elsik, Christine G., Tellam, Ross L., Worley, Kim C., Gibbs, Richard A., Muzny, Donna M., Weinstock, George M., Adelson, David L., Eichler, Evan E., Elnitski, Laura, Guigó, Roderic, Hamernik, Debora L., Kappes, Steve M., Lewin, Harris A., Lynn, David J., Nicholas, Frank W., Reymond, Alexandre, Rijnkels, Monique, Skow, Loren C., Zdobnov, Evgeny M., Schook, Lawrence, Womack, James, Alioto, Tyler, Antonarakis, Stylianos E., Astashyn, Alex, Chapple, Charles E., Chen, Hsiu-Chuan, Chrast, Jacqueline, Câmara, Francisco, Ermolaeva, Olga, Henrichsen, Charlotte N., Hlavina, Wratko, Kapustin, Yuri, Kiryutin, Boris, Kitts, Paul, Kokocinski, Felix, Landrum, Melissa, Maglott, Donna, Pruitt, Kim, Sapojnikov, Victor, Searle, Stephen M., Solovyev, Victor, Souvorov, Alexandre, Ucla, Catherine, Wyss, Carine, Anzola, Juan M., Gerlach, Daniel, Elhaik, Eran, Graur, Dan, Reese, Justin T., Edgar, Robert C., McEwan, John C., Payne, Gemma M., Raison, Joy M., Junier, Thomas, Kriventseva, Evgenia V., Eyras, Eduardo, Plass, Mireya, Donthu, Ravikiran, Larkin, Denis M., Reecy, James, Yang, Mary Q., Chen, Lin, Cheng, Ze, Chitko-McKown, Carol G., Liu, George E., Matukumalli, Lakshmi K., Song, Jiuzhou, Zhu, Bin, Bradley, Daniel G., Brinkman, Fiona S.L., Lau, Lilian P.L., Whiteside, Matthew D., Walker, Angela, Wheeler, Thomas T., Casey, Theresa, German, J. Bruce, Lemay, Danielle G., Maqbool, Nauman J., Molenaar, Adrian J., Seo, Seongwon, Stothard, Paul, Baldwin, Cynthia L., Baxter, Rebecca, Brinkmeyer-Langford, Candice L., Brown, Wendy C., Childers, Christopher P., Connelley, Timothy, Ellis, Shirley A., Fritz, Krista, Glass, Elizabeth J., Herzig, Carolyn T.A., Iivanainen, Antti, Lahmers, Kevin K., Bennett, Anna K., Dickens, C. Michael, Gilbert, James G.R., Hagen, Darren E., Salih, Hanni, Aerts, Jan, Caetano, Alexandre R., Dalrymple, Brian, Garcia, Jose Fernando, Gill, Clare A., Hiendleder, Stefan G., Memili, Erdogan, Spurlock, Diane, Williams, John L., Alexander, Lee, Brownstein, Michael J., Guan, Leluo, Holt, Robert A., Jones, Steven J.M., Marra, Marco A., Moore, Richard, Moore, Stephen S., Roberts, Andy, Taniguchi, Masaaki, Waterman, Richard C., Chacko, Joseph, Chandrabose, Mimi M., Cree, Andy, Dao, Marvin Diep, Dinh, Huyen H., Gabisi, Ramatu Ayiesha, Hines, Sandra, Hume, Jennifer, Jhangiani, Shalini N., Joshi, Vandita, Kovar, Christie L., Lewis, Lora R., Liu, Yih-shin, Lopez, John, Morgan, Margaret B., Nguyen, Ngoc Bich, Okwuonu, Geoffrey O., Ruiz, San Juana, Santibanez, Jireh, Wright, Rita A., Buhay, Christian, Ding, Yan, Dugan-Rocha, Shannon, Herdandez, Judith, Holder, Michael, Sabo, Aniko, Egan, Amy, Goodell, Jason, Wilczek-Boney, Katarzyna, Fowler, Gerald R., Hitchens, Matthew Edward, Lozado, Ryan J., Moen, Charles, Steffen, David, Warren, James T., Zhang, Jingkun, Chiu, Readman, Schein, Jacqueline E., Durbin, K. James, Havlak, Paul, Jiang, Huaiyang, Liu, Yue, Qin, Xiang, Ren, Yanru, Shen, Yufeng, Song, Henry, Bell, Stephanie Nicole, Davis, Clay, Johnson, Angela Jolivet, Lee, Sandra, Nazareth, Lynne V., Patel, Bella Mayurkumar, Pu, Ling-Ling, Vattathil, Selina, Williams, Rex Lee, Curry, Stacey, Hamilton, Cerissa, Sodergren, Erica, Wheeler, David A., Barris, Wes, Bennett, Gary L., Eggen, André, Green, Ronnie D., Harhay, Gregory P., Hobbs, Matthew, Jann, Oliver, Keele, John W., Kent, Matthew P., Lien, Sigbjørn, McKay, Stephanie D., McWilliam, Sean, Ratnakumar, Abhirami, Schnabel, Robert D., Smith, Timothy, Snelling, Warren M., Sonstegard, Tad S., Stone, Roger T., Sugimoto, Yoshikazu, Takasuga, Akiko, Taylor, Jeremy F., Van Tassell, Curtis P., MacNeil, Michael D., Abatepaulo, Antonio R.R., Abbey, Colette A., Ahola, Virpi, Almeida, Iassudara G., Amadio, Ariel F., Anatriello, Elen, Bahadue, Suria M., Biase, Fernando H., Boldt, Clayton R., Carroll, Jeffery A., Carvalho, Wanessa A., Cervelatti, Eliane P., Chacko, Elsa, Chapin, Jennifer E., Cheng, Ye, Choi, Jungwoo, Colley, Adam J., de Campos, Tatiana A., De Donato, Marcos, Santos, Isabel K.F. de Miranda, de Oliveira, Carlo J.F., Deobald, Heather, Devinoy, Eve, Donohue, Kaitlin E., Dovc, Peter, Eberlein, Annett, Fitzsimmons, Carolyn J., Franzin, Alessandra M., Garcia, Gustavo R., Genini, Sem, Gladney, Cody J., Grant, Jason R., Greaser, Marion L., Green, Jonathan A., Hadsell, Darryl L., Hakimov, Hatam A., Halgren, Rob, Harrow, Jennifer L., Hart, Elizabeth A., Hastings, Nicola, Hernandez, Marta, Hu, Zhi-Liang, Ingham, Aaron, Iso-Touru, Terhi, Jamis, Catherine, Jensen, Kirsty, Kapetis, Dimos, Kerr, Tovah, Khalil, Sari S., Khatib, Hasan, Kolbehdari, Davood, Kumar, Charu G., Kumar, Dinesh, Leach, Richard, Lee, Justin C-M, Li, Changxi, Logan, Krystin M., Malinverni, Roberto, Marques, Elisa, Martin, William F., Martins, Natalia F., Maruyama, Sandra R., Mazza, Raffaele, McLean, Kim L., Medrano, Juan F., Moreno, Barbara T., Moré, Daniela D., Muntean, Carl T., Nandakumar, Hari P., Nogueira, Marcelo F.G., Olsaker, Ingrid, Pant, Sameer D., Panzitta, Francesca, Pastor, Rosemeire C.P., Poli, Mario A., Poslusny, Nathan, Rachagani, Satyanarayana, Ranganathan, Shoba, Razpet, Andrej, Riggs, Penny K., Rincon, Gonzalo, Rodriguez-Osorio, Nelida, Rodriguez-Zas, Sandra L., Romero, Natasha E., Rosenwald, Anne, Sando, Lillian, Schmutz, Sheila M., Shen, Libing, Sherman, Laura, Southey, Bruce R., Lutzow, Ylva Strandberg, Sweedler, Jonathan V., Tammen, Imke, Telugu, Bhanu Prakash V.L., Urbanski, Jennifer M., Utsunomiya, Yuri T., Verschoor, Chris P., Waardenberg, Ashley J., Wang, Zhiquan, Ward, Robert, Weikard, Rosemarie, Welsh, Thomas H., White, Stephen N., Wilming, Laurens G., Wunderlich, Kris R., Yang, Jianqi, Zhao, Feng-Qi·2009·Science

DOI 10.1126/science.1169588PMC PMC2943200

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A survey of genetic diversity of cattle suggests two domestication events in Asia and selection by husbandry.

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Xu, Y., Jiang, Y., Shi, T., Cai, H., Lan, X., Zhao, X., Plath, M. W., & Chen, H. (2017) · PLoS ONE · doi:10.1371/journal.pone.0183921 · Cited by 33
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Jang, J., Terefe, E., Kim, K., Lee, Y. H., Belay, G., Tijjani, A., Han, J., Hanotte, O., & Kim, H. (2021) · BMC Genomics · doi:10.1186/s12864-021-07808-7 · Cited by 32
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Authors: The Bovine Genome Sequencing and Analysis Consortium, Elsik, C. G., Tellam, R. L., Worley, K. C., Gibbs, R. A., Muzny, D. M., Weinstock, G. M., Adelson, D. L., Eichler, E. E., Elnitski, L., Guigó, R., Hamernik, D. L., Kappes, S. M., Lewin, H. A., Lynn, D. J., Nicholas, F. W., Reymond, A., Rijnkels, M., Skow, L. C., Zdobnov, E. M., Schook, L., Womack, J., Alioto, T., Antonarakis, S. E., Astashyn, A., Chapple, C. E., Chen, H.-C., Chrast, J., Câmara, F., Ermolaeva, O., Henrichsen, C. N., Hlavina, W., Kapustin, Y., Kiryutin, B., Kitts, P., Kokocinski, F., Landrum, M., Maglott, D., Pruitt, K., Sapojnikov, V., Searle, S. M., Solovyev, V., Souvorov, A., Ucla, C., Wyss, C., Anzola, J. M., Gerlach, D., Elhaik, E., Graur, D., Reese, J. T., Edgar, R. C., McEwan, J. C., Payne, G. M., Raison, J. M., Junier, T., Kriventseva, E. V., Eyras, E., Plass, M., Donthu, R., Larkin, D. M., Reecy, J., Yang, M. Q., Chen, L., Cheng, Z., Chitko-McKown, C. G., Liu, G. E., Matukumalli, L. K., Song, J., Zhu, B., Bradley, D. G., Brinkman, F. S. L., Lau, L. P. L., Whiteside, M. D., Walker, A., Wheeler, T. T., Casey, T., German, J. B., Lemay, D. G., Maqbool, N. J., Molenaar, A. J., Seo, S., Stothard, P., Baldwin, C. L., Baxter, R., Brinkmeyer-Langford, C. L., Brown, W. C., Childers, C. P., Connelley, T., Ellis, S. A., Fritz, K., Glass, E. J., Herzig, C. T. A., Iivanainen, A., Lahmers, K. K., Bennett, A. K., Dickens, C. M., Gilbert, J. G. R., Hagen, D. E., Salih, H., Aerts, J., Caetano, A. R., Dalrymple, B., Garcia, J. F., Gill, C. A., Hiendleder, S. G., Memili, E., Spurlock, D., Williams, J. L., Alexander, L., Brownstein, M. J., Guan, L., Holt, R. A., Jones, S. J. M., Marra, M. A., Moore, R., Moore, S. S., Roberts, A., Taniguchi, M., Waterman, R. C., Chacko, J., Chandrabose, M. M., Cree, A., Dao, M. D., Dinh, H. H., Gabisi, R. A., Hines, S., Hume, J., Jhangiani, S. N., Joshi, V., Kovar, C. L., Lewis, L. R., Liu, Y.-S., Lopez, J., Morgan, M. B., Nguyen, N. B., Okwuonu, G. O., Ruiz, S. J., Santibanez, J., Wright, R. A., Buhay, C., Ding, Y., Dugan-Rocha, S., Herdandez, J., Holder, M., Sabo, A., Egan, A., Goodell, J., Wilczek-Boney, K., Fowler, G. R., Hitchens, M. E., Lozado, R. J., Moen, C., Steffen, D., Warren, J. T., Zhang, J., Chiu, R., Schein, J. E., Durbin, K. J., Havlak, P., Jiang, H., Liu, Y., Qin, X., Ren, Y., Shen, Y., Song, H., Bell, S. N., Davis, C., Johnson, A. J., Lee, S., Nazareth, L. V., Patel, B. M., Pu, L.-L., Vattathil, S., Williams, R. L., Curry, S., Hamilton, C., Sodergren, E., Wheeler, D. A., Barris, W., Bennett, G. L., Eggen, A., Green, R. D., Harhay, G. P., Hobbs, M., Jann, O., Keele, J. W., Kent, M. P., Lien, S., McKay, S. D., McWilliam, S., Ratnakumar, A., Schnabel, R. D., Smith, T., Snelling, W. M., Sonstegard, T. S., Stone, R. T., Sugimoto, Y., Takasuga, A., Taylor, J. F., Van Tassell, C. P., MacNeil, M. D., Abatepaulo, A. R. R., Abbey, C. A., Ahola, V., Almeida, I. G., Amadio, A. F., Anatriello, E., Bahadue, S. M., Biase, F. H., Boldt, C. R., Carroll, J. A., Carvalho, W. A., Cervelatti, E. P., Chacko, E., Chapin, J. E., Cheng, Y., Choi, J., Colley, A. J., de Campos, T. A., De Donato, M., Santos, I. K. F. D. M., de Oliveira, C. J. F., Deobald, H., Devinoy, E., Donohue, K. E., Dovc, P., Eberlein, A., Fitzsimmons, C. J., Franzin, A. M., Garcia, G. R., Genini, S., Gladney, C. J., Grant, J. R., Greaser, M. L., Green, J. A., Hadsell, D. L., Hakimov, H. A., Halgren, R., Harrow, J. L., Hart, E. A., Hastings, N., Hernandez, M., Hu, Z.-L., Ingham, A., Iso-Touru, T., Jamis, C., Jensen, K., Kapetis, D., Kerr, T., Khalil, S. S., Khatib, H., Kolbehdari, D., Kumar, C. G., Kumar, D., Leach, R., Lee, J. C.-M., Li, C., Logan, K. M., Malinverni, R., Marques, E., Martin, W. F., Martins, N. F., Maruyama, S. R., Mazza, R., McLean, K. L., Medrano, J. F., Moreno, B. T., Moré, D. D., Muntean, C. T., Nandakumar, H. P., Nogueira, M. F. G., Olsaker, I., Pant, S. D., Panzitta, F., Pastor, R. C. P., Poli, M. A., Poslusny, N., Rachagani, S., Ranganathan, S., Razpet, A., Riggs, P. K., Rincon, G., Rodriguez-Osorio, N., Rodriguez-Zas, S. L., Romero, N. E., Rosenwald, A., Sando, L., Schmutz, S. M., Shen, L., Sherman, L., Southey, B. R., Lutzow, Y. S., Sweedler, J. V., Tammen, I., Telugu, B. P. V. L., Urbanski, J. M., Utsunomiya, Y. T., Verschoor, C. P., Waardenberg, A. J., Wang, Z., Ward, R., Weikard, R., Welsh, T. H., White, S. N., Wilming, L. G., Wunderlich, K. R., Yang, J., & Zhao, F.-Q.
Affiliations: Baylor College of Medicine (US)
Corresponding author: Elsik, Christine G.
Tellam, Ross L.
Worley, Kim C.
ORCID: Elsik, Christine G.
Tellam, Ross L.
Worley, Kim C.
Gibbs, Richard A.
Muzny, Donna M.
Weinstock, George M.
Adelson, David L.
Eichler, Evan E.
Elnitski, Laura
Lewin, Harris A.
Lynn, David J.
Nicholas, Frank W.
Reymond, Alexandre
Rijnkels, Monique
Skow, Loren C.
Zdobnov, Evgeny M.
Schook, Lawrence
Alioto, Tyler
Antonarakis, Stylianos E.
Hlavina, Wratko
Kokocinski, Felix
Landrum, Melissa
Maglott, Donna
Pruitt, Kim
Solovyev, Victor
Anzola, Juan M.
Gerlach, Daniel
Elhaik, Eran
Reese, Justin T.
Edgar, Robert C.
McEwan, John C.
Raison, Joy M.
Junier, Thomas
Kriventseva, Evgenia V.
Eyras, Eduardo
Plass, Mireya
Larkin, Denis M.
Reecy, James
Chen, Lin
Chitko-McKown, Carol G.
Liu, George E.
Song, Jiuzhou
Zhu, Bin
Bradley, Daniel G.
Brinkman, Fiona S.L.
Lau, Lilian P.L.
Wheeler, Thomas T.
Casey, Theresa
German, J. Bruce
Lemay, Danielle G.
Maqbool, Nauman J.
Molenaar, Adrian J.
Seo, Seongwon
Stothard, Paul
Baldwin, Cynthia L.
Childers, Christopher P.
Connelley, Timothy
Glass, Elizabeth J.
Iivanainen, Antti
Lahmers, Kevin K.
Dickens, C. Michael
Gilbert, James G.R.
Hagen, Darren E.
Aerts, Jan
Caetano, Alexandre R.
Dalrymple, Brian
Gill, Clare A.
Hiendleder, Stefan G.
Williams, John L.
Holt, Robert A.
Jones, Steven J.M.
Marra, Marco A.
Moore, Richard
Moore, Stephen S.
Taniguchi, Masaaki
Waterman, Richard C.
Dinh, Huyen H.
Jhangiani, Shalini N.
Morgan, Margaret B.
Nguyen, Ngoc Bich
Ding, Yan
Sabo, Aniko
Steffen, David
Zhang, Jingkun
Chiu, Readman
Liu, Yue
Qin, Xiang
Shen, Yufeng
Vattathil, Selina
Sodergren, Erica
Wheeler, David A.
Bennett, Gary L.
Harhay, Gregory P.
Hobbs, Matthew
Keele, John W.
Kent, Matthew P.
Lien, Sigbjørn
McKay, Stephanie D.
McWilliam, Sean
Ratnakumar, Abhirami
Schnabel, Robert D.
Snelling, Warren M.
Sonstegard, Tad S.
Taylor, Jeremy F.
MacNeil, Michael D.
Abbey, Colette A.
Ahola, Virpi
Almeida, Iassudara G.
Biase, Fernando H.
Carvalho, Wanessa A.
Cheng, Ye
Santos, Isabel K.F. de Miranda
Fitzsimmons, Carolyn J.
Greaser, Marion L.
Green, Jonathan A.
Hadsell, Darryl L.
Harrow, Jennifer L.
Hu, Zhi-Liang
Ingham, Aaron
Jensen, Kirsty
Kapetis, Dimos
Khatib, Hasan
Kumar, Dinesh
Lee, Justin C-M
Li, Changxi
Malinverni, Roberto
Martin, William F.
Martins, Natalia F.
Maruyama, Sandra R.
Medrano, Juan F.
Moré, Daniela D.
Nogueira, Marcelo F.G.
Olsaker, Ingrid
Pant, Sameer D.
Rachagani, Satyanarayana
Ranganathan, Shoba
Riggs, Penny K.
Rosenwald, Anne
Shen, Libing
Southey, Bruce R.
Sweedler, Jonathan V.
Tammen, Imke
Telugu, Bhanu Prakash V.L.
Utsunomiya, Yuri T.
Verschoor, Chris P.
Waardenberg, Ashley J.
Wang, Zhiquan
Weikard, Rosemarie
Welsh, Thomas H.
White, Stephen N.
Wilming, Laurens G.
Zhao, Feng-Qi
Venue: Science
Publisher: American Association for the Advancement of Science (AAAS)
Published: 2009-04-24
Volume: 324
Issue: 5926
Pages: 522-528
ISSN: 0036-8075 (ISSN-L)
1095-9203
DOI: 10.1126/science.1169588
PMC: PMC2943200
OpenAlex: W2154380613
Cited by: 1,287
References: 31
Citations by year: 2026: 23 · 2025: 48 · 2024: 41 · 2023: 47 · 2022: 56 · 2021: 73 · 2020: 80 · 2019: 79 · 2018: 60 · 2017: 60 · 2016: 67 · 2015: 90 · 2014: 81 · 2013: 96 · 2012: 122
FWCI: 75.07
Type: journal article
Language: en
Open access: green
www.ncbi.nlm.nih.gov
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PubMed (publishedVersion)
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Lund University Publications (Lund University) (submittedVersion)
ANU Open Research (Australian National University) (submittedVersion)
Edinburgh Research Explorer (University of Edinburgh) (submittedVersion, other-oa)
UNESP Institutional Repository (São Paulo State University) (submittedVersion)
Griffith Research Online (submittedVersion)
CONICET Digital (CONICET) (submittedVersion, cc-by-nc-sa)
SERVAL (Université de Lausanne) (submittedVersion)
Archive ouverte UNIGE (University of Geneva) (submittedVersion)
Archive ouverte UNIGE (University of Geneva) (submittedVersion, cc-by)
Funders: Wellcome Trust (062023, 077198)
Biotechnology and Biological Sciences Research Council (BB/D524040/2, BBS/B/13438, BBS/B/13446)
National Institute on Drug Abuse (P30DA018310)
National Human Genome Research Institute (U54HG003273)
Topics: Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and phenotypic traits in livestock
Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Chromosomal and Genetic Variations
Keywords: cattle genome, taurine cattle, ruminant evolution, mammalian evolution, orthologs, segmental duplication, repetitive elements, gene deletion, livestock genetic improvement, meat and milk production
MeSH terms: Animals, Animals, Domestic, Cattle, Biological Evolution, Female, Humans, Male, Molecular Sequence Data, Proteins, Species Specificity, Genetic Variation, Genome, Alternative Splicing, Sequence Analysis, DNA, Evolution, Molecular, Synteny, MicroRNAs

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The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution

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