The DOI matches its Crossref record; 50 of the 50 references it cites were found in a registry or an index.
The ecology of the microbiome: Networks, competition, and stability
Abstract
What makes the gut microbiome stable?: Classically, we think of our microbiome as stable, benign, and cooperative. Recent experimental work is beginning to unpick essential functions that can be attributed to the stable microbiota of humans. To be able to manipulate the microbiome to improve health, we need to understand community structure and composition and we need models to quantify and predict stability. Coyte et al. applied concepts and tools from community ecology to gut microbiome assembly. Independently developed models converged on a surprising answer: A high diversity of species is likely to coexist stably when the system is dominated by competitive, rather than cooperative, interactions. Science , this issue p. 663
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Resilience and Stability of Ecological Systems
Holling, C. S. (1973) · Annual Review of Ecology and Systematics · doi:10.1146/annurev.es.04.110173.000245 · Cited by 18,995
Diversity, stability and resilience of the human gut microbiota
Lozupone, C. A., Stombaugh, J. I., Gordon, J. I., Jansson, J. K., & Knight, R. (2012) · Nature · doi:10.1038/nature11550 · Cited by 5,533
Host-Bacterial Mutualism in the Human Intestine
Bäckhed, F., Ley, R. E., Sonnenburg, J. L., Peterson, D. A., & Gordon, J. I. (2005) · Science · doi:10.1126/science.1104816 · Cited by 5,277
Metagenomic Analysis of the Human Distal Gut Microbiome
Gill, S. R., Pop, M., DeBoy, R. T., Eckburg, P. B., Turnbaugh, P. J., Samuel, B. S., Gordon, J. I., Relman, D. A., Fraser-Liggett, C. M., & Nelson, K. E. (2006) · Science · doi:10.1126/science.1124234 · Cited by 4,699
Functional interactions between the gut microbiota and host metabolism
Tremaroli, V., & Bäckhed, F. (2012) · Nature · doi:10.1038/nature11552 · Cited by 4,387
Hsiao, E. Y., McBride, S. W., Hsien, S., Sharon, G., Hyde, E. R., McCue, T., Codelli, J. A., Chow, J., Reisman, S. E., Petrosino, J. F., et al. (2013) · Cell · doi:10.1016/j.cell.2013.11.024 · Cited by 3,283
The diversity–stability debate
McCann, K. S. (2000) · Nature · doi:10.1038/35012234 · Cited by 3,143
Will a Large Complex System be Stable?
MAY, R. M. (1972) · Nature · doi:10.1038/238413a0 · Cited by 2,869
The gut microbiota, bacterial metabolites and colorectal cancer
Louis, P., Hold, G. L., & Flint, H. J. (2014) · Nature Reviews Microbiology · doi:10.1038/nrmicro3344 · Cited by 2,816
Dethlefsen, L., & Relman, D. A. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1000087107 · Cited by 2,421
Research works printed but not linked: 3
- 10.1007/BF00277165 · doi:10.1007/bf00277165
- Gerschgorin S., Über die Abgrenzung der Eigenwerte einer Matrix.. B. Acad. Sci. USSR 25, 750–754 (1931).
- 10.1086/283384 · doi:10.1086/283384
Cited by
Swanson, K. S., Gibson, G. R., Hutkins, R., Reimer, R. A., Reid, G., Verbeke, K., Scott, K. P., Holscher, H. D., Azad, M. B., Delzenne, N. M., et al. (2020) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-020-0344-2 · Cited by 2,196
Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota
Magnúsdóttir, S., Heinken, A., Kutt, L., Ravcheev, D. A., Bauer, E., Noronha, A., Greenhalgh, K., Jäger, C., Baginska, J., Wilmes, P., et al. (2017) · Nature Biotechnology · doi:10.1038/nbt.3703 · Cited by 798
So, D., Whelan, K., Rossi, M., Morrison, M., Holtmann, G., Kelly, J. T., Shanahan, E. R., Staudacher, H. M., & Campbell, K. L. (2018) · The American Journal of Clinical Nutrition · doi:10.1093/ajcn/nqy041 · Cited by 683
Dietary fibre modulates the gut microbiota
Cronin, P., Joyce, S. A., O’Toole, P. W., & O’Connor, E. M. (2021) · Nutrients · doi:10.3390/nu13051655 · Cited by 658
Deciphering microbial interactions in synthetic human gut microbiome communities
Venturelli, O. S., Carr, A. V., Fisher, G., Hsu, R. H., Lau, R., Bowen, B. P., Hromada, S., Northen, T., & Arkin, A. P. (2018) · Molecular Systems Biology · doi:10.15252/msb.20178157 · Cited by 544
Metadata
- Authors
- Coyte, K. Z., Schluter, J., & Foster, K. R.
- Venue
- Science
- Published
- 2015-11-06
- Volume
- 350
- Issue
- 6261
- Pages
- 663-666
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- OpenAlex
- W2126452774
- Cited by
- 2,748
- References
- 50
- FWCI
- 36.41
- Type
- journal article
- Language
- en
- Open access
- closed
- Funders
- European Research Council (242670)
- Engineering and Physical Sciences Research Council
- Japan Society for the Promotion of Science
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: The ecology of the microbiome: Networks, competition, and stability. https://app.cochat.ai/papers/10.1126/science.aad2602
- The paper
- Coyte, K. Z., Schluter, J., & Foster, K. R. (2015). The ecology of the microbiome: Networks, competition, and stability. Science. https://doi.org/10.1126/science.aad2602
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
