The DOI matches its Crossref record; 42 of the 46 references it cites were found in a registry or an index.
Sex reversal following deletion of a single distal enhancer of Sox9
Open accessAbstract
Sox9 regulation during sex determination: Sex determination is regulated by the Sox9 gene. During testis differentiation, this gene is directly targeted by the product of the Y chromosome–encoded gene Sry . The regulatory region of Sox9 is complex, which is typical of genes with multiple roles in development. Gonen et al. find that a single far-upstream 557–base pair element is critical for up-regulating Sox9 . Without it, XY mice develop as females instead of males. The 557–base pair enhancer is conserved, likely to be relevant to human disorders of sex differentiation, and probably essential because it acts early in a time-critical process, and any failure allows ovary-specific factors to dominate. Science , this issue p. 1469
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“it was recently shown that deletion of a relatively weak distal enhancer in the mouse Sox9 sex determination locus leads to sex reversal, while the phenotypic effects of deleting stronger and more proximal Sox9 enhancers are much less pronounced [510].”
From Transcriptional enhancers and their communication with gene promoters (2021) · cites this paper as [510]
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Buenrostro, J. D., Giresi, P. G., Zaba, L. C., Chang, H. Y., & Greenleaf, W. J. (2013) · Nature Methods · doi:10.1038/nmeth.2688 · Cited by 6,422
Campomelic dysplasia and autosomal sex reversal caused by mutations in an SRY-related gene
Foster, J. W., Dominguez-Steglich, M., Guioli, S., Kwok, C., Weller, P., Stevanović, M., Weissenbach, J., Mansour, S., Young, I., Goodfellow, P., et al. (1994) · Nature · doi:10.1038/372525a0 · Cited by 1,602
Wagner, T., Wirth, J., Meyer, J., Zabel, B., Held, M., Zimmer, J., Pasantes, J., Bricarelli, F. D., Keutel, J., Hustert, E., et al. (1994) · Cell · doi:10.1016/0092-8674(94)90041-8 · Cited by 1,592
Schmidt, D., Ovitt, C., Anlag, K., Fehsenfeld, S., Gredsted, L., Treier, A.-C., & Treier, M. (2004) · Development · doi:10.1242/dev.00969 · Cited by 740
Sex determination involves synergistic action of SRY and SF1 on a specific Sox9 enhancer
Sekido, R., & Lovell-Badge, R. (2008) · Nature · doi:10.1038/nature07622 · Cited by 728
Self-citationSox9 induces testis development in XX transgenic mice
Vidal, V., Chaboissier, M.-C., de Rooij, D., & Schedl, A. (2001) · Nature Genetics · doi:10.1038/90046 · Cited by 691
Sex Determination and Gonadal Development in Mammals
Wilhelm, D., Palmer, S. J., & Koopman, P. A. (2007) · Physiological Reviews · doi:10.1152/physrev.00009.2006 · Cited by 683
Enhancer redundancy provides phenotypic robustness in mammalian development
Osterwalder, M., Barozzi, I., Tissières, V., Fukuda-Yuzawa, Y., Mannion, B. J., Afzal, S. Y., Lee, E. A., Zhu, Y., Plajzer-Frick, I., Pickle, C. S., et al. (2018) · Nature · doi:10.1038/nature25461 · Cited by 642
Genomic views of distant-acting enhancers
Visel, A., Rubin, E. M., & Pennacchio, L. A. (2009) · Nature · doi:10.1038/nature08451 · Cited by 610
Functional analysis of Sox8 and Sox9 during sex determination in the mouse
Chaboissier, M.-C., Kobayashi, A., Vidal, V., Lützkendorf, S., van de Kant, H. V. D., Wegner, M., de Rooij, D., Behringer, R., & Schedl, A. (2004) · Development · doi:10.1242/dev.01087 · Cited by 568
Topology of mammalian developmental enhancers and their regulatory landscapes
de Laat, W., & Duboule, D. (2013) · Nature · doi:10.1038/nature12753 · Cited by 521
Vertebrate sex determination: evolutionary plasticity of a fundamental switch
Capel, B. (2017) · Nature Reviews Genetics · doi:10.1038/nrg.2017.60 · Cited by 521
The versatile functions of Sox9 in development, stem cells, and human diseases
Jo, A., Denduluri, S. K., Zhang, B., Wang, Z., Yin, L., Yan, Z., Kang, R. W., Shi, L. L., Mok, J. M., Lee, M. J., et al. (2014) · Genes & Diseases · doi:10.1016/j.gendis.2014.09.004 · Cited by 385
SOX9 is up-regulated by the transient expression of SRY specifically in Sertoli cell precursors.
Sekido, R., Bar, I., Narváez, V., Penny, G. D., & Lovell-Badge, R. (2004) · Developmental Biology · doi:10.1016/j.ydbio.2004.07.011 · Cited by 362
Self-citationHomozygous Inactivation of Sox9 Causes Complete XY Sex Reversal in Mice1
Barrionuevo, F., Bagheri-Fam, S., Klattig, J., Kist, R., Taketo, M., Englert, C., & Scherer, G. (2006) · Biology of Reproduction · doi:10.1095/biolreprod.105.045930 · Cited by 351
Turatsinze, J., Thomas‐Chollier, M., Defrance, M., & van Helden, J. (2008) · Nature Protocols · doi:10.1038/nprot.2008.97 · Cited by 291
Houston, C., Opitz, J. M., Spranger, J., Macpherson, R. I., Reed, M. H., Gilbert, E. F., Herrmann, J., & Schinzel, A. (1983) · American journal of medical genetics · doi:10.1002/ajmg.1320150103 · Cited by 282
The DNA-binding specificity of SOX9 and other SOX proteins.
Mertin, S., McDowall, S., & Harley, V. (1999) · Nucleic Acids Research · doi:10.1093/nar/27.5.1359 · Cited by 239
A critical time window of Sry action in gonadal sex determination in mice
Hiramatsu, R., Matoba, S., Kanai‐Azuma, M., Tsunekawa, N., Fukui, Y., Kurohmaru, M., Morohashi, K.-I., Wilhelm, D., Koopman, P. A., & Kanai, Y. (2008) · Development · doi:10.1242/dev.029587 · Cited by 226
Ultraconserved Enhancers Are Required for Normal Development
Dickel, D. E., Ypsilanti, A. R., Pla, R., Zhu, Y., Barozzi, I., Mannion, B. J., Khin, Y. S., Fukuda-Yuzawa, Y., Plajzer-Frick, I., Pickle, C. S., et al. (2018) · Cell · doi:10.1016/j.cell.2017.12.017 · Cited by 190
Beverdam, A., & Koopman, P. (2006) · Human Molecular Genetics · doi:10.1093/hmg/ddi463 · Cited by 160
Gasca, S., Cañizares, J., Barbara, P. D. S., Méjean, C., Poulat, F., Berta, P., & Boizet-Bonhoure, B. (2002) · Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.172383099 · Cited by 154
Self-citationMechanisms of transcriptional precision in animal development
Lagha, M., Bothma, J. P., & Levine, M. (2012) · Trends in Genetics · doi:10.1016/j.tig.2012.03.006 · Cited by 151
Novel PCR Assay for Determining the Genetic Sex of Mice
McFarlane, L., Truong, V., Palmer, J. S., & Wilhelm, D. (2013) · Sexual Development · doi:10.1159/000348677 · Cited by 151
Hartwig, S., Ho, J., Pandey, P., Macisaac, K., Taglienti, M. E., Xiang, M., Alterovitz, G., Ramoni, M., Fraenkel, E., & Kreidberg, J. (2010) · Development · doi:10.1242/dev.045732 · Cited by 131
A multiplexed system for quantitative comparisons of chromatin landscapes
van Galen, P., Viny, A., Ram, O., Ryan, R. J. H., Cotton, M. J., Donohue, L., Sievers, C., Drier, Y., Liau, B. B., Gillespie, S. M., et al. (2015) · Molecules and Cells · doi:10.1016/j.molcel.2015.11.003 · Cited by 118
Sex determination and the control of Sox9 expression in mammals
Jakob, S., & Lovell-Badge, R. (2011) · The FEBS Journal · doi:10.1111/j.1742-4658.2011.08029.x · Cited by 109
Self-citationYamagata, T., Nishida, J., Sakai, R., Tanaka, T., Honda, H., Hirano, N., Mano, H., Yazaki, Y., & Hirai, H. (1995) · Molecular and Cellular Biology · doi:10.1128/mcb.15.7.3830 · Cited by 103
Kim, G.-J., Sock, E., Buchberger, A., Just, W., Denzer, F., Hoepffner, W., German, J., Cole, T., Mann, J., Seguin, J., et al. (2015) · Journal of Medical Genetics · doi:10.1136/jmedgenet-2014-102864 · Cited by 102
Rahmoun, M., Lavery, R., Laurent-Chaballier, S., Bellora, N., Philip, G. K., Rossitto, M., Symon, A., Pailhoux, E., Cammas, F., Chung, J., et al. (2017) · Nucleic Acids Research · doi:10.1093/nar/gkx328 · Cited by 99
Self-citationGene regulation at a distance: From remote enhancers to 3D regulatory ensembles
Spitz, F. (2016) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2016.06.017 · Cited by 99
Vertebrate DM domain proteins bind similar DNA sequences and can heterodimerize on DNA
Murphy, M. W., Zarkower, D., & Bardwell, V. (2007) · BMC Molecular Biology · doi:10.1186/1471-2199-8-58 · Cited by 94
Mead, T., Wang, Q.-Q., Bhattaram, P., Dy, P., Afelik, S., Jensen, J., & Lefebvre, V. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt140 · Cited by 91
Gonen, N., Quinn, A., O’Neill, H. C., Koopman, P. A., & Lovell-Badge, R. H. (2017) · PLoS Genetics · doi:10.1371/journal.pgen.1006520 · Cited by 85
Self-citationUsing transgenic reporter assays to functionally characterize enhancers in animals
Kvon, E. Z. (2015) · Genomics · doi:10.1016/j.ygeno.2015.06.007 · Cited by 73
SOX9: A genomic view of tissue specific expression and action.
Symon, A., & Harley, V. (2017) · International Journal of Biochemistry and Cell Biology · doi:10.1016/j.biocel.2017.03.005 · Cited by 72
Applying CRISPR–Cas9 tools to identify and characterize transcriptional enhancers
Lopes, R., Korkmaz, G., & Agami, R. (2016) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm.2016.79 · Cited by 65
Normal onset, but prolonged expression, of Sry gene in the B6.YDOM sex-reversed mouse gonad.
Lee, C.-H., & Taketo, T. (1994) · Developmental Biology · doi:10.1006/dbio.1994.1266 · Cited by 62
Genome-wide identification of regulatory elements in Sertoli cells
Maatouk, D. M., Natarajan, A., Shibata, Y., Song, L., Crawford, G. E., Ohler, U., & Capel, B. (2017) · Development · doi:10.1242/dev.142554 · Cited by 45
Self-citationCorrea, S. M., Washburn, L. L., Kahlon, R., Musson, M. C., Bouma, G., Eicher, E., & Albrecht, K. H. (2012) · PLoS Genetics · doi:10.1371/journal.pgen.1002569 · Cited by 35
Ferraz-de-Souza, B., Lin, L., Shah, S. H., Jina, N., Hubank, M., Dattani, M., & Achermann, J. (2011) · The FASEB Journal · doi:10.1096/fj.10-170522 · Cited by 31
Using ROADMAP Data to Identify Enhancers Associated with Disorders of Sex Development
Ohnesorg, T., Croft, B., Tan, J. T., & Sinclair, A. (2016) · Sexual Development · doi:10.1159/000445398 · Cited by 13
Cited by
Sorted by citations
Long-range enhancer–promoter contacts in gene expression control
Schoenfelder, S., & Fraser, P. (2019) · Nature Reviews Genetics · doi:10.1038/s41576-019-0128-0 · Cited by 1,102
Sex determination, gonadal sex differentiation, and plasticity in vertebrate species
Nagahama, Y., Chakraborty, T., Paul‐Prasanth, B., Ohta, K., & Nakamura, M. (2020) · Physiological Reviews · doi:10.1152/physrev.00044.2019 · Cited by 361
SOX9 in cartilage development and disease
Lefebvre, V., Angelozzi, M., & Haseeb, A. (2019) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2019.07.008 · Cited by 226
Sequence determinants of human gene regulatory elements
Sahu, B., Hartonen, T., Pihlajamaa, P., Wei, B., Dave, K., Zhu, F., Kaasinen, E., Lidschreiber, K., Lidschreiber, M., Daub, C. O., et al. (2022) · Nature Genetics · doi:10.1038/s41588-021-01009-4 · Cited by 198
Thiecke, M. J., Wutz, G., Muhar, M., Tang, W., Bevan, S., Malysheva, V., Stocsits, R., Neumann, T., Zuber, J., Fraser, P., et al. (2020) · Cell Reports · doi:10.1016/j.celrep.2020.107929 · Cited by 177
Metadata
- Authors
- Gonen, N., Futtner, C. R., Wood, S., Garcia-Moreno, S. A., Salamone, I. M., Samson, S. C., Sekido, R., Poulat, F., Maatouk, D. M., & Lovell-Badge, R.
- Affiliations
- The Francis Crick Institute (GB)
- Department of Obstetrics and Gynecology, Northwestern University, Chicago, IL 60611, USA.
- Northwestern University (US)
- University of Aberdeen (GB)
- Department of Genetics and Development, Institute of Human Genetics, CNRS-University of Montpellier UMR9002, Montpellier, France.
- Corresponding author
- Maatouk, Danielle M.
- Lovell-Badge, Robin
- ORCID
- Venue
- Science
- Published
- 2018-06-29
- Volume
- 360
- Issue
- 6396
- Pages
- 1469-1473
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- PMC
- PMC6034650
- OpenAlex
- W2808131961
- Cited by
- 235
- References
- 46
- Citations by year
- 2026: 17 · 2025: 16 · 2024: 24 · 2023: 27 · 2022: 42 · 2021: 33 · 2020: 28 · 2019: 32 · 2018: 16
- FWCI
- 16.71
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- HAL (submittedVersion)
- UCL Discovery (University College London) (submittedVersion)
- Figshare (submittedVersion, cc-by)
- Funders
- Northwestern Medical Faculty Foundation, Inc.
- Francis Crick Institute
- Agence Nationale de la Recherche
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
- Health Sciences › Medicine › Endocrinology, Diabetes and Metabolism › Sexual Differentiation and Disorders
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Keywords
- SOX9, sex determination, sex reversal, distal enhancers, SRY, testicular differentiation, XY females, disorders of sex development, gene expression regulation
- MeSH terms
- Animals, Enhancer Elements, Genetic, Female, Gonadal Dysgenesis, 46,XY, Humans, Male, Testis, Conserved Sequence, Sequence Deletion, Sex Determination Processes, Transcription Initiation Site, Mice, Sex-Determining Region Y Protein, SOX9 Transcription Factor
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review