Characterization of Variant Salmonella Genomic Island 1 Multidrug Resistance Regions from Serovars Typhimurium DT104 and Agona

Boyd, David; Cloeckaert, Axel; Chaslus-Dancla, Elisabeth; Mulvey, Michael R.

doi:10.1128/aac.46.6.1714-1722.2002

Cited by 209Salmonella and Campylobacter epidemiologyAntibiotic Resistance in BacteriaBacterial Genetics and Biotechnology

Characterization of Variant Salmonella Genomic Island 1 Multidrug Resistance Regions from Serovars Typhimurium DT104 and Agona

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Boyd, David, Cloeckaert, Axel, Chaslus-Dancla, Elisabeth, Mulvey, Michael R.·2002·Antimicrobial Agents and Chemotherapy

DOI 10.1128/aac.46.6.1714-1722.2002PMC PMC127246

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Abstract

Strains of multidrug-resistant Salmonella enterica serovar Typhimurium DT104 (DT104) and S. enterica serovar Agona (Agona) have been found to harbor Salmonella genomic island 1 (SGI1), a 43-kb genomic region that contains many of the drug resistance genes. Such strains are resistant to ampicillin (pse-1), chloramphenicol/florfenicol (floR), streptomycin/spectinomycin (aadA2), sulfonamides (sul1), and tetracycline [tet(G)] (commonly called the ACSSuT phenotype). All five resistance genes are found in a 13-kb multidrug resistance (MDR) region consisting of an unusual class I integron structure related to In4. We examined DT104 and Agona strains that exhibited other resistance phenotypes to determine if the resistance genes were associated with variant SGI1 MDR regions. All strains were found to harbor variant SGI1-like elements by using a combination of Southern hybridization, PCR mapping, and sequencing. Variant SGI1-like elements were found with MDR regions consisting of (i) an integron consisting of the SGI1 MDR region with the addition of a region containing a putative transposase gene (orf513) and dfrA10 located between duplicated qacE Δ 1/sulI genes (SGI1-A; ACSSuTTm); (ii) an integron with either an aadA2(SSu) or a pse-1(ASu) cassette (SGI1-C and SGI1-B, respectively); (iii) an integron consisting of the SGI1-C MDR region plus an orf513/dfrA10 region as in SGI1-A (SGI1-D; ASSuTm; ampicillin resistance due to a TEM β-lactamase); and (iv) an integron related to that in SGI1 but which contains a 10-kb inversion between two copies of IS 6100, one which is inserted in floR(SGI1-E; ASSuT). We hypothesize that the MDR of SGI1 is subject to recombinational events that lead to the various resistance phenotypes in the Salmonella strains in which it is found.

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SXT constins are present in virtually all recent clinical V. cholerae isolates from Asia.
“SXT constins are present in virtually all recent clinical V. cholerae isolates from Asia, and SXT variants are arising in a manner similar to the Salmonella genomic island 1 multidrug resistance regions from serovars Typhimurium DT104 and Agona (6).”
From Antibiotic Resistance Conferred by a Class I Integron and SXT Constin in Vibrio cholerae O1 Strains Isolated in Laos (2004) · cites this paper as [6]

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Genome Sequencing Reveals the Complex Polysaccharide-Degrading Ability of Novel Deep-Sea Bacterium Flammeovirga pacifica WPAGA1
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Complete Nucleotide Sequence of a 43-Kilobase Genomic Island Associated with the Multidrug Resistance Region ofSalmonella entericaSerovar Typhimurium DT104 and Its Identification in Phage Type DT120 and Serovar Agona
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Self-citation
Salmonella Genomic Island 1 Multidrug Resistance Gene Clusters in Salmonella enterica Serovar Agona Isolated in Belgium in 1992 to 2002
Doublet, B., Butaye, P., Imberechts, H., Boyd, D. A., Mulvey, M. R., Chaslus-Dancla, E., & Cloeckaert, A. (2004) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.48.7.2510-2517.2004 · Cited by 58 · see citing works
Self-citation
IS6100-mediated genetic rearrangement within the complex class 1 integron In104 of the Salmonella genomic island 1
Targant, H., Doublet, B., Aarestrup, F. M., Cloeckaert, A., & Madec, J.-Y. (2010) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkq163 · Cited by 32 · see citing works
Self-citation
Antibiotic Resistance Genes and Salmonella Genomic Island 1 in Salmonella enterica Serovar Typhimurium Isolated in Italy
Carattoli, A., Filetici, E., Villa, L., Dionisi, A. M., Ricci, A., & Luzzi, I. (2002) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.46.9.2821-2828.2002 · Cited by 85 · see citing works
The genetics of Salmonella genomic island 1
Mulvey, M. R., Boyd, D. A., Olson, A. B., Doublet, B., & Cloeckaert, A. (2006) · Microbes and Infection · doi:10.1016/j.micinf.2005.12.028 · Cited by 216 · see citing works
Self-citation

Authors: Boyd, D., Cloeckaert, A., Chaslus-Dancla, E., & Mulvey, M. R.
Affiliations: Health Canada (CA)
Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (FR)
ORCID: Boyd, David
Cloeckaert, Axel
Venue: Antimicrobial Agents and Chemotherapy
Publisher: American Society for Microbiology
Published: 2002-06
Volume: 46
Issue: 6
Pages: 1714-1722
ISSN: 0066-4804 (ISSN-L)
1098-6596
DOI: 10.1128/aac.46.6.1714-1722.2002
PMC: PMC127246
OpenAlex: W2123741711
Cited by: 209
References: 52
Citations by year: 2026: 5 · 2025: 1 · 2024: 4 · 2023: 2 · 2022: 3 · 2021: 5 · 2020: 4 · 2019: 9 · 2018: 5 · 2017: 5 · 2016: 6 · 2015: 6 · 2014: 5 · 2013: 7 · 2012: 5
FWCI: 26.02
Type: journal article
Language: en
Open access: green
europepmc.org
Licence: journals.asm.org/non-commercial-tdm-license (tdm)
Locations: Antimicrobial Agents and Chemotherapy (publishedVersion)
Europe PMC (PubMed Central) (publishedVersion)
PubMed Central (publishedVersion)
PubMed (publishedVersion)
Topics: Life Sciences › Agricultural and Biological Sciences › Food Science › Salmonella and Campylobacter epidemiology
Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Medicine › Antibiotic Resistance in Bacteria
Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
Keywords: Salmonella genomic island 1, multidrug resistance, Salmonella Typhimurium DT104, Salmonella Agona, class 1 integron, aadA2, floR, qacEΔ1, transposase genes, gene rearrangement, antimicrobial resistance genes
MeSH terms: Amino Acid Sequence, Anti-Bacterial Agents, Culture Media, DNA, Bacterial, Drug Resistance, Microbial, Microbial Sensitivity Tests, Terminology as Topic, Phenotype, Salmonella Infections, Sequence Homology, Nucleic Acid, Genomic Library, Drug Resistance, Multiple, Salmonella enterica

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Characterization of Variant Salmonella Genomic Island 1 Multidrug Resistance Regions from Serovars Typhimurium DT104 and Agona

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