Mass Transport of Macromolecules within an In Vitro Model of Supragingival Plaque
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The aim of this study was to examine the diffusion of macromolecules through an in vitro biofilm model of supragingival plaque. Polyspecies biofilms containing Actinomyces naeslundii , Fusobacterium nucleatum , Streptococcus oralis , Streptococcus sobrinus , Veillonella dispar , and Candida albicans were formed on sintered hydroxyapatite disks and then incubated at room temperature for defined periods with fluorescent markers with molecular weights ranging from 3,000 to 900,000. Subsequent examination by confocal laser scanning microscopy revealed that the mean square penetration depths for all tested macromolecules except immunoglobulin M increased linearly with time, diffusion coefficients being linearly proportional to the cube roots of the molecular weights of the probes (range, 10,000 to 240,000). Compared to diffusion in bulk water, diffusion in the biofilms was markedly slower. The rate of diffusion for each probe appeared to be constant and not a function of biofilm depth. Analysis of diffusion phenomena through the biofilms suggested tortuosity as the most probable explanation for retarded diffusion. Selective binding of probes to receptors present in the biofilms could not explain the observed extent of retardation of diffusion. These results are relevant to oral health, as selective attenuated diffusion of fermentable carbohydrates and acids produced within dental plaque is thought to be essential for the development of carious lesions.
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Thurnheer et al found that penetration depths of macromolecules decreased linearly for molecular weights up to 240,000 Da in Zurich biofilm model of supragingival plaque.
“Thurnheer et al242 found that penetration depths of macromolecules decreased linearly for molecular weights up to 240,000 Da in their Zurich biofilm model of supragingival plaque.”
From The dental plaque biofilm matrix (2021) · cites this paper as [242]
Mixed-species biofilms cultured in vitro retard the penetration of immunoglobulin G (IgG) and immunoglobulin M antibodies, to the point where IgG does not reach the center of clusters a few hundred micrometers in diameter.
“Mixed-species biofilms cultured in vitro retard the penetration of immunoglobulin G (IgG) and immunoglobulin M antibodies, to the point where IgG does not reach the center of clusters a few hundred micrometers in diameter.242,250”
From The dental plaque biofilm matrix (2021) · cites this paper as [242]
Exopolysaccharides create chemical and metabolic gradients within biofilms that affect chemical and nutrient cycling as well as diffusion, thus altering the microenvironment and pH within the biofilm consortium.
“Furthermore, exopolysaccharides create chemical and metabolic gradients within biofilms that affect chemical and nutrient cycling as well as diffusion, thus altering the microenvironment and pH within biofilms consortium.”
From The oral microbiome: Role of key organisms and complex networks in oral health and disease (2021) · cites this paper as [287]
Cites
Einstein, A. (1905) · Annalen der Physik · doi:10.1002/andp.19053220806 · Cited by 8,422 · see citing works
Costerton, J. W., Lewandowski, Z., Caldwell, D. E., Korber, D. R., & Lappin-Scott, H. M. (1995) · Annual Review of Microbiology · doi:10.1146/annurev.mi.49.100195.003431 · Cited by 4,718 · see citing works
An Introduction to Error Analysis
Taylor, J. R. (1982) · Medical Entomology and Zoology · Cited by 2,807 · see citing works
<i>An Introduction to Error Analysis: The Study of Uncertainties in Physical Measurements</i>
Taylor, J. R., & Thompson, W. (1998) · Physics Today · doi:10.1063/1.882103 · Cited by 2,734 · see citing works
Zur kinetischen Theorie der Brownschen Molekularbewegung und der Suspensionen
Smoluchowski, M. (1906) · Annalen der Physik · doi:10.1002/andp.19063261405 · Cited by 1,515 · see citing works
Nicholson, C., & Phillips, J. M. (1981) · The Journal of Physiology · doi:10.1113/jphysiol.1981.sp013981 · Cited by 785 · see citing works
Diffusion and related transport mechanisms in brain tissue
Nicholson, C. (2001) · Reports on Progress in Physics · doi:10.1088/0034-4885/64/7/202 · Cited by 491 · see citing works
Validation of an in vitro Biofilm Model of Supragingival Plaque
Guggenheim, B., Giertsen, E., Schüpbach, P., & Shapiro, S. (2001) · Journal of Dental Research · doi:10.1177/00220345010800011201 · Cited by 358 · see citing works
Self-citationRamsing, N. B., Kuhl, M. E., & Jørgensen, B. B. (1993) · Applied and Environmental Microbiology · doi:10.1128/aem.59.11.3840-3849.1993 · Cited by 275 · see citing works
Salivary α-Amylase: Role in Dental Plaque and Caries Formation
Scannapieco, F. A., Torres, G., & Levine, M. J. (1993) · Critical Reviews in Oral Biology & Medicine · doi:10.1177/10454411930040030701 · Cited by 272 · see citing works
Nicholson, C., & Tao, L. (1993) · Biophysical Journal · doi:10.1016/s0006-3495(93)81324-9 · Cited by 266 · see citing works
Hereditary fructose intolerance
Froesch, E. R., Wolf, H. P., Baitsch, H., Prader, A., & Labhart, A. (1963) · The American Journal of Medicine · doi:10.1016/0002-9343(63)90050-0 · Cited by 254 · see citing works
Food Starches and Dental Caries
Lingström, P., van Houte, J., & Kashket, S. (2000) · Critical Reviews in Oral Biology & Medicine · doi:10.1177/10454411000110030601 · Cited by 238 · see citing works
Determination of Diffusion Coefficients in Biofilms by Confocal Laser Microscopy
Lawrence, J. R., Wolfaardt, G. M., & Korber, D. R. (1994) · Applied and Environmental Microbiology · doi:10.1128/aem.60.4.1166-1173.1994 · Cited by 209 · see citing works
An in vitro Oral Biofilm Model for Comparing the Efficacy of Antimicrobial Mouthrinses
Shapiro, S., Giertsen, E., & Guggenheim, B. (2002) · Caries Research · doi:10.1159/000057866 · Cited by 190 · see citing works
Self-citationImmobilized cells: basics and applications.
Wijffels, R. H., Buitelaar, R. M., Bucke, C., & TRAMPER, J. (1996) · Socio-Environmental Systems Modeling · Cited by 188 · see citing works
Entropic trapping of macromolecules by mesoscopic periodic voids in a polymer hydrogel
Liu, L., Li, P., & Asher, S. A. (1999) · Nature · doi:10.1038/16426 · Cited by 186 · see citing works
Antigenic heterogeneity of Bacteroides intermedius as recognized by monoclonal antibodies
Gmür, R., & Guggenheim, B. (1983) · Infection and Immunity · doi:10.1128/iai.42.2.459-470.1983 · Cited by 183 · see citing works
Self-citationSantegoeds, C. M., Damgaard, L. R., Hesselink, G., Zopfi, J., Lens, P. N. L., Gerard Muyzer, C., & de Beer, D. (1999) · Applied and Environmental Microbiology · doi:10.1128/aem.65.10.4618-4629.1999 · Cited by 153 · see citing works
Sugar and Dental Caries: A Review of Human Studies
Newbrun, E. (1982) · Science · doi:10.1126/science.7046052 · Cited by 137 · see citing works
Physiological Approaches to the Control of Oral Biofilms
Marsh, P. D., & Bradshaw, D. J. (1997) · Advances in Dental Research · doi:10.1177/08959374970110010901 · Cited by 132 · see citing works
Microelectrode measurements of local mass transport rates in heterogeneous biofilms
Rasmussen, K., & Lewandowski, Z. (1998) · Biotechnology and Bioengineering · doi:10.1002/(sici)1097-0290(19980805)59:3 · Cited by 130 · see citing works
Diffusional transport of macromolecules in developing nerve processes
Popov, S., & Poo, M. (1992) · Journal of Neuroscience · doi:10.1523/jneurosci.12-01-00077.1992 · Cited by 120 · see citing works
Mooser, G., & Wong, C. (1988) · Infection and Immunity · doi:10.1128/iai.56.4.880-884.1988 · Cited by 114 · see citing works
Dental plaque revisited: oral biofilms in health and disease
Wilson, M., & Wilson, M. (1998) · Journal of Periodontal Research · doi:10.1111/j.1600-0765.1998.tb02341.x · Cited by 114 · see citing works
Carbohydrates in Pooled Dental Plaque
Hotz, P., Guggenheim, B., & Schmid, R. (2009) · Caries Research · doi:10.1159/000259783 · Cited by 110 · see citing works
Self-citationBryers, J. D., & Drummond, F. (1998) · Biotechnology and Bioengineering · doi:10.1002/(sici)1097-0290(19981120)60:4 · Cited by 110 · see citing works
Guiot, E., Georges, P., Brun, A., Fontaine‐Aupart, M., Bellon‐Fontaine, M., & Briandet, R. (2002) · Photochemistry and Photobiology · doi:10.1562/0031-8655(2002)0750570hodimb2.0.co2 · Cited by 99 · see citing works
Evidence that tropical soil environment can support the growth of Escherichia coli
Byappanahalli, M. N., & Fujioka, R. S. (1998) · Water Science & Technology · doi:10.2166/wst.1998.0533 · Cited by 91 · see citing works
Treskatis, S. ‐., Orgeldinger, V., Wolf, H., & Gilles, E. D. (1997) · Biotechnology and Bioengineering · doi:10.1002/(sici)1097-0290(19970120)53:2 · Cited by 85 · see citing works
Spatial Arrangements and Associative Behavior of Species in an In Vitro Oral Biofilm Model
Guggenheim, M., Shapiro, S., Gmür, R., & Guggenheim, B. (2001) · Applied and Environmental Microbiology · doi:10.1128/aem.67.3.1343-1350.2001 · Cited by 84 · see citing works
Self-citationDiffusion in Pseudomonas aeruginosa biofilms: a pulsed field gradient NMR study
Vogt, M., Flemming, H., & Veeman, W. S. (2000) · Journal of Biotechnology · doi:10.1016/s0168-1656(99)00213-8 · Cited by 82 · see citing works
Dental plaque revisited--oral biofilms in health and disease.
Newman, H., & Wilson, M. M. (2000) · PubMed · Cited by 80 · see citing works
Diffusion of Dextran in Aqueous (Hydroxypropyl)cellulose
Bu, Z., & Russo, P. S. (1994) · Macromolecules · doi:10.1021/ma00083a017 · Cited by 75 · see citing works
Measurement of local effective diffusivity in heterogeneous biofilms
Beyenal, H., Tanyolaç, A., & Lewandowski, Z. (1998) · Water Science & Technology · doi:10.2166/wst.1998.0804 · Cited by 74 · see citing works
Macromolecules released from polymers: diffusion into unstirred fluids
Radomsky, M. L., Whaley, K. J., Ra, C., & Saltzman, W. M. (1990) · Biomaterials · doi:10.1016/0142-9612(90)90018-l · Cited by 73 · see citing works
Beuling, E. E., van Dusschoten, D., Lens, P. N. L., van den Heuvel, J. C., As, H. V., & Ottengraf, S. P. P. (1998) · Biotechnology and Bioengineering · doi:10.1002/(sici)1097-0290(19981105)60:3 · Cited by 72 · see citing works
Bacterial Metabolism in Dental Biofilms
Carlsson, J. (1997) · Advances in Dental Research · doi:10.1177/08959374970110012001 · Cited by 67 · see citing works
Suci, P. A., Geesey, G. G., & Tyler, B. J. (2001) · Journal of Microbiological Methods · doi:10.1016/s0167-7012(01)00268-8 · Cited by 65 · see citing works
A Chemical and Histological Study of Artificial Caries in Human Dental Enamel in vitro
Ingram, G. S., & Silverstone, L. M. (2009) · Caries Research · doi:10.1159/000260543 · Cited by 62 · see citing works
Carrasco, B., de la Torre, J. G., Davis, K. G., Jones, S., Athwal, D., Walters, C., Burton, D. R., & Harding, S. E. (2001) · Biophysical Chemistry · doi:10.1016/s0301-4622(01)00220-4 · Cited by 62 · see citing works
Diffusion of sugars and carboxylic acids through human dental plaque in vitro
Dibdin, G. H. (1981) · Archives of Oral Biology · doi:10.1016/0003-9969(81)90010-8 · Cited by 59 · see citing works
The Discovery of a Novel R-phycoerythrin from an Antarctic Red Alga
MacColl, R., Eisele, L. E., Williams, E. C., & Bowser, S. S. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.29.17157 · Cited by 52 · see citing works
Fractal structure of biofilms: new tools for investigation of morphology
(1995) · Water Science & Technology · doi:10.1016/0273-1223(96)00013-3 · Cited by 50 · see citing works
Diffusion of Radio tracers in Human Dental Plaque
Tatevossian, A. (2009) · Caries Research · doi:10.1159/000260396 · Cited by 39 · see citing works
Removal and recovery of lead fixed-bed biosorption with immobilized bacterial biomass
(1998) · Water Science & Technology · doi:10.1016/s0273-1223(98)00526-5 · Cited by 35 · see citing works
Glucan Inhibition of Diffusion in Plaque
Hojo, S., Higuchi, M., & Araya, S. (1976) · Journal of Dental Research · doi:10.1177/00220345760550011501 · Cited by 35 · see citing works
Hereditary fructose intolerance. Dental status of eight patients.
Tm, M., & Froesch, E. R. (1967) · PubMed · Cited by 33 · see citing works
Multidimensional Modeling of Biofilm Structure
Picioreanu, C. (1999) · Research Repository (Delft University of Technology) · Cited by 31 · see citing works
Birmingham, J. J., Hughes, N. P., & Treloar, R. (1995) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.1995.0168 · Cited by 27 · see citing works
McNee, S. G., Geddes, D. A. M., Weetman, D. A., Sweeney, D., & BEELEY, J. A. (1982) · Archives of Oral Biology · doi:10.1016/0003-9969(82)90107-8 · Cited by 27 · see citing works
Kuehn, M., Mehl, M., Hausner, M., Bungartz, H., & Wuertz, S. (2001) · Water Science & Technology · doi:10.2166/wst.2001.0361 · Cited by 27 · see citing works
Fractal structure of biofilms: new tools for investigation of morphology
Hermanowicz, S. W., Schindler, U., & Wilderer, P. A. (1995) · Water Science & Technology · doi:10.2166/wst.1995.0273 · Cited by 27 · see citing works
A Brief Survey of Recent in vitro Work on Diffusion of Small Ions and Molecules in Dental Plaque
Dibdin, G. H. (2015) · KARGER eBooks · doi:10.1159/000408738 · Cited by 23 · see citing works
Effect of SDS Micelles on Rhodamine-B Diffusion in Hydrogels
Häglund, B. O., Sundelöf, L., Upadrashta, S. M., & Wurster, D. E. (1996) · Journal of Chemical Education · doi:10.1021/ed073p889 · Cited by 19 · see citing works
Characterization of monoclonal antibodies for rapid identification of in clinical samples
Thurnheer, T., Guggenheim, B., & Gmür, R. (1997) · FEMS Microbiology Letters · doi:10.1016/s0378-1097(97)00125-0 · Cited by 15 · see citing works
Self-citationThurnheer, T., Guggenheim, B., & Gmür, R. (2006) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1997.tb10378.x · Cited by 15 · see citing works
Self-citationFiber-optic microsensors to measure backscattered light intensity in biofilms
Beyenal, H., Lewandowski, Z., Yakymyshyn, C. P., Lemley, B., & Wehri, J. (2000) · Applied Optics · doi:10.1364/ao.39.003408 · Cited by 14 · see citing works
Competition between nitrogen-fixing cyanobacteria during phosphorus-limited growth
Nobel, W. T. D., Staats, N., & Mur, L. R. (1995) · Water Science & Technology · doi:10.1016/0273-1223(95)00685-0 · Cited by 10 · see citing works
Bryers, J. D., & Drummond, F. (1996) · Progress in biotechnology · doi:10.1016/s0921-0423(96)80028-1 · Cited by 6 · see citing works
Water law and human rights - roles and responsibilities
de Lange, M. (2001) · Water Science & Technology · doi:10.2166/wst.2001.0204 · Cited by 6 · see citing works
Biofilm structure and behaviour: influence of hydrodynamics and nutrients
Stoodley, P., Boyle, J. D., & Lappin-Scott, H. M. (1999) · ePrints Soton (University of Southampton) · Cited by 5 · see citing works
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Bowen, W. H., & Koo, H. (2011) · Caries Research · doi:10.1159/000324598 · Cited by 1,053 · see citing works
The biofilm matrix: multitasking in a shared space
Flemming, H., van Hullebusch, E. D., Neu, T. R., Nielsen, P. H., Seviour, T. W., Stoodley, P., Wingender, J., & Wuertz, S. (2022) · Nature Reviews Microbiology · doi:10.1038/s41579-022-00791-0 · Cited by 1,025 · see citing works
Resistance of bacterial biofilms to disinfectants: a review
Bridier, A., Briandet, R., Thomas, V., & Dubois‐Brissonnet, F. (2011) · Biofouling · doi:10.1080/08927014.2011.626899 · Cited by 952 · see citing works
Dental Plaque as a Microbial Biofilm
Marsh, P. D. (2004) · Caries Research · doi:10.1159/000077756 · Cited by 763 · see citing works
The oral microbiome: Role of key organisms and complex networks in oral health and disease
Sedghi, L., DiMassa, V., Harrington, A., Lynch, S. V., & Kapila, Y. L. (2021) · Periodontology 2000 · doi:10.1111/prd.12393 · Cited by 755 · see citing works
Dental plaque: biological significance of a biofilm and community life‐style
Marsh, P. (2005) · Journal Of Clinical Periodontology · doi:10.1111/j.1600-051x.2005.00790.x · Cited by 599 · see citing works
Pseudomonas aeruginosa Biofilms in Disease
Mulcahy, L. R., Isabella, V. M., & Lewis, K. (2013) · Microbial Ecology · doi:10.1007/s00248-013-0297-x · Cited by 517 · see citing works
Koo, H., Xiao, J., Klein, M. I., & Jeon, J. G. (2010) · Journal of Bacteriology · doi:10.1128/jb.01649-09 · Cited by 508 · see citing works
The dental plaque biofilm matrix
Jakubovics, N. S., Goodman, S. D., Mashburn‐Warren, L., Stafford, G. P., & Cieplik, F. (2021) · Periodontology 2000 · doi:10.1111/prd.12361 · Cited by 488 · see citing works
Dental plaque biofilms: communities, conflict and control
Marsh, P. D., Moter, A., & DeVine, D. (2010) · Periodontology 2000 · doi:10.1111/j.1600-0757.2009.00339.x · Cited by 432 · see citing works
Resistance Toward Chlorhexidine in Oral Bacteria – Is There Cause for Concern?
Cieplik, F., Jakubovics, N. S., Buchalla, W., Maisch, T., Hellwig, E., & Al-Ahmad, A. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.00587 · Cited by 424 · see citing works
Streptococcus mutans-derived extracellular matrix in cariogenic oral biofilms
Klein, M. I., Hwang, G., Santos, P. H. S., Campanella, O. H., & Koo, H. (2015) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2015.00010 · Cited by 351 · see citing works
Besinis, A., de Peralta, T. L., Tredwin, C. J., & Handy, R. D. (2015) · ACS Nano · doi:10.1021/nn505015e · Cited by 274 · see citing works
Biofilms, a new approach to the microbiology of dental plaque
ten Cate, J. M. (2006) · Odontology · doi:10.1007/s10266-006-0063-3 · Cited by 264 · see citing works
Penetration of <i>Candida</i> Biofilms by Antifungal Agents
Al-Fattani, M. A., & Douglas, L. J. (2004) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.48.9.3291-3297.2004 · Cited by 235 · see citing works
Material properties of biofilms—a review of methods for understanding permeability and mechanics
Billings, N., Birjiniuk, A., Samad, T. S., Doyle, P. S., & Ribbeck, K. (2015) · Reports on Progress in Physics · doi:10.1088/0034-4885/78/3/036601 · Cited by 235 · see citing works
Multiplex FISH analysis of a six-species bacterial biofilm
Thurnheer, T., Gmür, R., & Guggenheim, B. (2003) · Journal of Microbiological Methods · doi:10.1016/j.mimet.2003.09.003 · Cited by 222 · see citing works
Self-citationComposition and development of oral bacterial communities
Palmer, R. J., Jr. (2013) · Periodontology 2000 · doi:10.1111/j.1600-0757.2012.00453.x · Cited by 222 · see citing works
Kouidhi, B., Qurashi, Y. M. A. A., & Chaieb, K. (2015) · Microbial Pathogenesis · doi:10.1016/j.micpath.2015.02.007 · Cited by 204 · see citing works
Efficacy of gasiform ozone and photodynamic therapy on a multispecies oral biofilm in vitro
Müller, P., Guggenheim, B., & Schmidlin, P. R. (2007) · European Journal Of Oral Sciences · doi:10.1111/j.1600-0722.2007.00418.x · Cited by 177 · see citing works
Self-citationYe, M., Zhao, Y., Wang, Y., Zhao, M., Yodsanit, N., Xie, R., Andes, D. R., & Gong, S. (2021) · Advanced Materials · doi:10.1002/adma.202006772 · Cited by 174 · see citing works
Candida biofilm: a well-designed protected environment
Mukherjee, P. K., Zhou, G., Munyon, R., & Ghannoum, M. A. (2005) · Medical Mycology · doi:10.1080/13693780500107554 · Cited by 149 · see citing works
The Role of Hydrogen Peroxide in Environmental Adaptation of Oral Microbial Communities
Zhu, L. D., & Kreth, J. (2012) · Oxidative Medicine and Cellular Longevity · doi:10.1155/2012/717843 · Cited by 146 · see citing works
Hope, C. K., & Wilson, M. (2004) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.48.5.1461-1468.2004 · Cited by 146 · see citing works
Improvement of XTT assay performance for studies involving Candida albicans biofilms
da Silva, W. J., Seneviratne, C. J., Parahitiyawa, N., Rosa, E. A. R., Samaranayake, L. P., & Cury, A. A. D. B. (2008) · Brazilian Dental Journal · doi:10.1590/s0103-64402008000400014 · Cited by 135 · see citing works
Penetration of Fluoride into Natural Plaque Biofilms
Watson, P. S., Pontefract, H. A., DeVine, D., Shore, R. F., Nattress, B. R., Kirkham, J., & Robinson, C. (2005) · Journal of Dental Research · doi:10.1177/154405910508400510 · Cited by 134 · see citing works
Xiao, J., & Koo, H. (2009) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.2009.04616.x · Cited by 132 · see citing works
Thurnheer, T., Karygianni, L., Flury, M., & Belibasakis, G. N. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.01716 · Cited by 126 · see citing works
Self-citationHe, J., Hwang, G., Liu, Y., Gao, L., Kilpatrick‐Liverman, L., Santarpia, P., Zhou, X., & Koo, H. (2016) · Journal of Bacteriology · doi:10.1128/jb.00021-16 · Cited by 124 · see citing works
Guggenheim, B., Gmür, R., Galicia, J. C., Stathopoulou, P. G., Benakanakere, M. R., Meier, A., Thurnheer, T., & Kinane, D. F. (2009) · BMC Microbiology · doi:10.1186/1471-2180-9-280 · Cited by 122 · see citing works
Self-citationApplication of the Zürich Biofilm Model to Problems of Cariology
Guggenheim, B., Guggenheim, M., Gmür, R., Giertsen, E., & Thurnheer, T. (2004) · Caries Research · doi:10.1159/000077757 · Cited by 115 · see citing works
Self-citationStrategies to Enhance the Biological Effects of Fluoride on Dental Biofilms
Koo, H. (2008) · Advances in Dental Research · doi:10.1177/154407370802000105 · Cited by 111 · see citing works
Innate Cellular Responses to the Periodontal Biofilm
Benakanakere, M., & Kinane, D. F. (2011) · Frontiers of oral physiology/Frontiers of oral biology · doi:10.1159/000329670 · Cited by 108 · see citing works
Investigation of Microbial Biofilm Structure by Laser Scanning Microscopy
Neu, T. R., & Lawrence, J. R. (2014) · Advances in biochemical engineering, biotechnology · doi:10.1007/10_2014_272 · Cited by 103 · see citing works
Influences of starch and sucrose on Streptococcus mutans biofilms
Duarte, S., Klein, M. I., Aires, C. P., Cury, J. A., Bowen, W. H., & Koo, H. (2008) · Oral Microbiology and Immunology · doi:10.1111/j.1399-302x.2007.00412.x · Cited by 97 · see citing works
Chalmers, N. I., Palmer, R. J., Jr., Du‐Thumm, L., Sullivan, R. J., Shi, W., & Kolenbrander, P. E. (2006) · Applied and Environmental Microbiology · doi:10.1128/aem.02164-06 · Cited by 95 · see citing works
Quantifying Diffusion in a Biofilm of Streptococcus mutans
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Polyspecies biofilm formation on implant surfaces with different surface characteristics
Schmidlin, P. R., MÜLLER, P., Attin, T., Wieland, M., Hofer, D., & Guggenheim, B. (2013) · Journal of Applied Oral Science · doi:10.1590/1678-7757201302312 · Cited by 83 · see citing works
Self-citationAshrafudoulla, M., Mizan, M. F. R., Park, S. H., & Ha, S.-D. (2020) · Critical Reviews in Food Science and Nutrition · doi:10.1080/10408398.2020.1767031 · Cited by 77 · see citing works
Sakaue, Y., Domon, H., Oda, M., Takenaka, S., Kubo, M., Fukuyama, Y., Okiji, T., & Terao, Y. (2015) · Microbiology and Immunology · doi:10.1111/1348-0421.12343 · Cited by 74 · see citing works
Jeon, J., Klein, M. I., Xiao, J., Gregoire, S., Rosalen, P. L., & Koo, H. (2009) · BMC Microbiology · doi:10.1186/1471-2180-9-228 · Cited by 73 · see citing works
Chlorhexidine Resistance or Cross-Resistance, That Is the Question
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A novel TEM contrasting technique for extracellular polysaccharides in in vitro biofilms
Reese, S., & Guggenheim, B. (2007) · Microscopy Research and Technique · doi:10.1002/jemt.20471 · Cited by 71 · see citing works
Self-citationThurnheer, T., & Belibasakis, G. N. (2018) · Molecular Oral Microbiology · doi:10.1111/omi.12216 · Cited by 69 · see citing works
Self-citationWhy Solid-State Fermentation Seems to be Resistant to Catabolite Repression?
Viniegra‐González, G., & Favela‐Torres, E. (2006) · DOAJ (DOAJ: Directory of Open Access Journals) · Cited by 66 · see citing works
Effect of sodium fluoride on oral biofilm microbiota and enamel demineralization
Thurnheer, T., & Belibasakis, G. N. (2018) · Archives of Oral Biology · doi:10.1016/j.archoralbio.2018.02.010 · Cited by 66 · see citing works
Self-citationStreptococcus suis biofilm: regulation, drug-resistance mechanisms, and disinfection strategies
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Ohsumi, T., Takenaka, S., Wakamatsu, R., Sakaue, Y., Narisawa, N., Senpuku, H., Ohshima, H., Terao, Y., & Okiji, T. (2015) · PLoS ONE · doi:10.1371/journal.pone.0116647 · Cited by 59 · see citing works
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Self-citationSandt, C., Barbeau, J., Gagnon, M.-A., & Lafleur, M. (2007) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkm382 · Cited by 58 · see citing works
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Srikantha, T., Daniels, K. J., Pujol, C., Kim, E., & Soll, D. R. (2013) · Eukaryotic Cell · doi:10.1128/ec.00071-13 · Cited by 54 · see citing works
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Bardow, A., Hofer, E., Nyvad, B., ten Cate, J. M., Kirkeby, S., Moe, D., & Nauntofte, B. (2004) · Caries Research · doi:10.1159/000081660 · Cited by 45 · see citing works
Koh, W. H., Thompson, A. N., Edwards, H., Monis, P., & Clode, P. L. (2014) · BMC Microbiology · doi:10.1186/s12866-014-0281-8 · Cited by 44 · see citing works
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Kolenbrander, P. E., & Palmer, R. J., Jr. (2004) · Wiley eBooks · doi:10.1128/9781555817718.ch6 · Cited by 36 · see citing works
Golmohamadi, M., Clark, R. J., Veinot, J. G. C., & Wilkinson, K. J. (2013) · Environmental Chemistry · doi:10.1071/en12106 · Cited by 35 · see citing works
Lawrence, J. R., Swerhone, G. D. W., Kuhlicke, U., & Neu, T. R. (2016) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiw183 · Cited by 33 · see citing works
Klein, M. I., Xiao, J., Heydorn, A., & Koo, H. (2011) · Journal of Visualized Experiments · doi:10.3791/2512 · Cited by 32 · see citing works
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Gu, F., Lux, R., Du‐Thumm, L., Stokes, I., Kreth, J., Anderson, M. H., Wong, D. T., Wolinsky, L. E., Sullivan, R. J., & Shi, W. (2005) · Journal of Microbiological Methods · doi:10.1016/j.mimet.2005.02.013 · Cited by 29 · see citing works
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Botelho, J. N., Villegas-Salinas, M., TRONCOSO-GAJARDO, P., Giacaman, R. A., & Cury, J. A. (2016) · Brazilian Oral Research · doi:10.1590/1807-3107bor-2016.vol30.0052 · Cited by 27 · see citing works
Wakamatsu, R., Takenaka, S., Ohsumi, T., Terao, Y., Ohshima, H., & Okiji, T. (2013) · Clinical Oral Investigations · doi:10.1007/s00784-013-1002-7 · Cited by 27 · see citing works
Tonon, C. C., Ashraf, S., Quílez-Alburquerque, J., Rastelli, A. N. D. S., Hasan, T. G., Lyons, A. M., & Greer, A. (2021) · Photochemistry and Photobiology · doi:10.1111/php.13461 · Cited by 26 · see citing works
Wu, M., Xu, L., Cai, Z., Huang, S. H., Li, Y., Lei, L., & Huang, X. (2019) · Photochemistry and Photobiology · doi:10.1111/php.13161 · Cited by 24 · see citing works
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Gränicher, K. A., Karygianni, L., Attin, T., & Thurnheer, T. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.741863 · Cited by 23 · see citing works
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Thurnheer, T., Giertsen, E., Gmür, R., & Guggenheim, B. (2008) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.2008.03810.x · Cited by 23 · see citing works
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van den Berg, L., Ortega, S. T., van Loosdrecht, M. C. M., & de Kreuk, M. (2022) · Water Research X · doi:10.1016/j.wroa.2022.100148 · Cited by 22 · see citing works
Herczegh, A., Gyurkovics, M., Agababyan, H., Ghidán, Á., & Lohinai, Z. M. (2013) · Acta Microbiologica et Immunologica Hungarica · doi:10.1556/amicr.60.2013.3.10 · Cited by 22 · see citing works
Cieplik, F., Wimmer, F., Muehler, D., Thurnheer, T., Belibasakis, G. N., Hiller, K., Maisch, T., & Buchalla, W. (2018) · Caries Research · doi:10.1159/000487815 · Cited by 22 · see citing works
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Pierre, C., Bertrand, G., Pavy, I., Benhamou, O., Rey, C. C., Roques, C. G., & Combes, C. (2022) · Journal of Functional Biomaterials · doi:10.3390/jfb14010020 · Cited by 20 · see citing works
Parvin, F., Rahman, M. A., Deva, A. K., Vickery, K., & Hu, H. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24054983 · Cited by 20 · see citing works
Sekhar, S. C., Kumar, R., & Chakraborti, A. (2009) · Journal of Medical Microbiology · doi:10.1099/jmm.0.010355-0 · Cited by 20 · see citing works
Applying enzyme treatments in Bacillus cereus biofilm removal
Yang, S., Wang, Y., Ren, F., Li, Z., & Dong, Q. (2023) · LWT · doi:10.1016/j.lwt.2023.114667 · Cited by 19 · see citing works
Molecular Principles of Adhesion and Biofilm Formation
Kreth, J., & Herzberg, M. C. (2015) · Springer series on biofilms · doi:10.1007/978-3-662-47415-0_2 · Cited by 20 · see citing works
Mass transfer of therapeutics through natural human plaque biofilms
Robinson, C. (2011) · Archives of Oral Biology · doi:10.1016/j.archoralbio.2011.02.001 · Cited by 18 · see citing works
Marcotte, L., Barbeau, J., & Lafleur, M. (2004) · Applied Spectroscopy · doi:10.1366/0003702042475484 · Cited by 18 · see citing works
Cao, L., Zhen-zhen, Z., Shuang-bo, X., Ma, M., & Xin, W. (2017) · Journal of Biomedical Research · doi:10.7555/jbr.31.20150151 · Cited by 17 · see citing works
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Thurnheer, T., & Paqué, P. N. (2020) · Monographs in oral science · doi:10.1159/000510197 · Cited by 17 · see citing works
Self-citationBremer, P. J., Flint, S., Brooks, J. D., & Palmer, J. S. (2015) · doi:10.1002/9781118876282.ch1 · Cited by 16 · see citing works
- Authors
- Thurnheer, T., Gmür, R., Shapiro, S., & Guggenheim, B.
- Affiliations
- University of Zurich (CH)
- Institute for Oral Microbiology and General Immunology, University of Zürich, CH-8028 Zürich, Switzerland
- Venue
- Applied and Environmental Microbiology
- Publisher
- American Society for Microbiology
- Published
- 2003-03
- Volume
- 69
- Issue
- 3
- Pages
- 1702-1709
- ISSN
- 0099-2240 (ISSN-L)
- 1098-5336
- PMC
- PMC150054
- OpenAlex
- W2166083475
- Cited by
- 145
- References
- 62
- Citations by year
- 2026: 1 · 2025: 2 · 2024: 3 · 2023: 7 · 2022: 5 · 2021: 10 · 2020: 5 · 2019: 4 · 2018: 8 · 2017: 3 · 2016: 6 · 2015: 11 · 2014: 6 · 2013: 11 · 2012: 6
- FWCI
- 9.97
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Applied and Environmental Microbiology (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Zurich Open Repository and Archive (University of Zurich) (acceptedVersion, other-oa)
- Zurich Open Repository and Archive (University of Zurich) (submittedVersion, other-oa)
- Zurich Open Repository and Archive (University of Zurich)
- Funders
- Universität Konstanz
- Topics
- Health Sciences › Dentistry › Periodontics › Oral microbiology and periodontitis research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Bacterial biofilms and quorum sensing
- Health Sciences › Dentistry › Periodontics › Dental Health and Care Utilization
- Keywords
- supragingival plaque, dental plaque, macromolecular diffusion, diffusion coefficient, molecular weight dependence, tortuosity, fluorescent probes, immunoglobulin M, Actinomyces naeslundii, Fusobacterium nucleatum, Streptococcus sobrinus, Streptococcus oralis, Veillonella dispar, Candida albicans, hydroxyapatite, caries development, oral health
- MeSH terms
- Actinomyces, Albumins, Candida albicans, Dental Plaque, Dextrans, Diffusion, Fluorescent Dyes, Gingiva, Models, Biological, Veillonella, Fusobacterium nucleatum, Streptococcus sobrinus, Biofilms, Streptococcus oralis, Macromolecular Substances
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