Cryptococcus neoformans Gene Expression during Experimental Cryptococcal Meningitis
Open accessAbstract
Cryptococcus neoformans, an encapsulated basidiomycete fungus of medical importance, is capable of crossing the blood-brain barrier and causing meningitis in both immunocompetent and immunocompromised individuals. To gain insight into the adaptation of the fungus to the host central nervous system (CNS), serial analysis of gene expression (SAGE) was used to characterize the gene expression profile of C. neoformans cells recovered from the CNS of infected rabbits. A SAGE library was constructed, and 49,048 tags were sequenced; 16,207 of these tags were found to represent unique sequences or tag families. Of the 304 most-abundant tags, 164 were assigned to a putative gene for subsequent functional grouping. The results (as determined according to the number of tags that identified genes encoding proteins required for these functions) indicated that the C. neoformans cells were actively engaged in protein synthesis, protein degradation, stress response, small-molecule transport, and signaling. In addition, a high level of energy requirement of the fungal cells was suggested by a large number of tags that matched putative genes for energy production. Taken together, these findings provide the first insight into the transcriptional adaptation of C. neoformans to the host environment and identify the set of fungal genes most highly expressed during cerebrospinal fluid infection.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Copper concentrations vary widely in different tissues within a mammalian host.
“the copper transporter gene CTR4 is expressed by C. neoformans at a constant low level in fungus growing in the lungs of mice, but is expressed at a high level in fungus isolated from the central nervous system due to the different physiological copper concentrations present at these sites (Steen et al. 2003; Ding et al. 2013).”
From Genetic analysis of Hsp90 function in <i>Cryptococcus neoformans</i> highlights key roles in stress tolerance and virulence (2022) · cites this paper as Steen et al. 2003
Hsp90 is naturally abundant in fungal cells and is induced to even greater levels by heat shock and other proteotoxic stresses.
“Hsp90 is naturally abundant in fungal cells and is induced to even greater levels by heat shock and other proteotoxic stresses10,15,32-35.”
From Fungal Hsp90: a biological transistor that tunes cellular outputs to thermal inputs (2012) · cites this paper as [33]
Hsp90 levels increase following environmental challenges.
“Furthermore, although Hsp90 levels increase following environmental challenges, Hsp90 activity is tightly controlled via post-translational regulation and an autoregulatory loop involving the heat shock transcription factor, Hsf1.”
From Fungal Hsp90: a biological transistor that tunes cellular outputs to thermal inputs (2012) · cites this paper as [33]
Cites
Gene Ontology: tool for the unification of biology
Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D., Butler, H., Cherry, J. M., Davis, A. P., Dolinski, K., Dwight, S. S., Eppig, J. T., et al. (2000) · Nature Genetics · doi:10.1038/75556 · Cited by 43,206 · see citing works
Hershko, A., & Ciechanover, A. (1998) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.67.1.425 · Cited by 8,840 · see citing works
Base-Calling of Automated Sequencer Traces Using Phred. I. Accuracy AssessmentPreprint
Ewing, B., Hillier, L., Wendl, M. C., & Green, P. (1998) · Genome Research · doi:10.1101/gr.8.3.175 · Cited by 6,993 · see citing works
Base-Calling of Automated Sequencer Traces Using <i>Phred.</i> II. Error Probabilities
Ewing, B., & Green, P. (1998) · Genome Research · doi:10.1101/gr.8.3.186 · Cited by 5,439 · see citing works
Serial Analysis of Gene Expression
Velculescu, V. E., Zhang, L., Vogelstein, B., & Kinzler, K. W. (1995) · Science · doi:10.1126/science.270.5235.484 · Cited by 3,713 · see citing works
Consed: a graphical tool for sequence finishing.Preprint
Gordon, D., Abajian, C., & Green, P. (1998) · Genome Research · doi:10.1101/gr.8.3.195 · Cited by 3,706 · see citing works
The Significance of Digital Gene Expression ProfilesPreprint
Audic, S., & Claverie, J. (1997) · Genome Research · doi:10.1101/gr.7.10.986 · Cited by 2,793 · see citing works
Remodeling of Yeast Genome Expression in Response to Environmental Changes
Causton, H. C., Ren, B., Koh, S. S., Harbison, C. T., Kanin, E. I., Jennings, E. G., Lee, T. I., True, H. L., Lander, E. S., & Young, R. A. (2001) · Molecular Biology of the Cell · doi:10.1091/mbc.12.2.323 · Cited by 1,364 · see citing works
Characterization of the Yeast Transcriptome
Velculescu, V. E., Zhang, L., Zhou, W., Vogelstein, R. J., Basrai, M. A., Bassett, D. E., Hieter, P., Vogelstein, B., & Kinzler, K. W. (1997) · Cell · doi:10.1016/s0092-8674(00)81845-0 · Cited by 973 · see citing works
Feasibility of Bioremediation by White-Rot Fungi
S., P. (2001) · Applied Microbiology and Biotechnology · doi:10.1007/s002530100745 · Cited by 954 · see citing works
Global transcriptional responses of fission yeast to environmental stress
Chen, D., Toone, W. M., Mata, J., Lyne, R., Burns, G., Kivinen, K., Brazma, A., Jones, N., & Bähler, J. (2003) · Molecular Biology of the Cell · doi:10.1091/mbc.e02-08-0499 · Cited by 796 · see citing works
Heat Shock Proteins: Endogenous Modulators of Apoptotic Cell Death
Garrido, C., Gurbuxani, S. K., Ravagnan, L., & Kroemer, G. (2001) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.2001.5427 · Cited by 777 · see citing works
Finley, D. J., Bartel, B., & Varshavsky, A. J. (1989) · Nature · doi:10.1038/338394a0 · Cited by 720 · see citing works
Casadevall, A., & Perfect, J. R. (1998) · ASM Press eBooks · doi:10.1128/9781555818241 · Cited by 673 · see citing works
Self-citationThe TOR signaling cascade regulates gene expression in response to nutrientsPreprint
Cardenas, M. E., Cutler, N. S., Lorenz, M. C., Como, C. J. D., & Heitman, J. (1999) · Genes & Development · doi:10.1101/gad.13.24.3271 · Cited by 580 · see citing works
Calcineurin is required for virulence of Cryptococcus neoformans
Odom, A., Muir, S., Lim, E., Toffaletti, D. L., Perfect, J., & Heitman, J. (1997) · The EMBO Journal · doi:10.1093/emboj/16.10.2576 · Cited by 516 · see citing works
Self-citation<i>Cryptococcus neoformans</i>Is a Facultative Intracellular Pathogen in Murine Pulmonary Infection
Feldmesser, M., Kress, Y., Novikoff, P., & Casadevall, A. (2000) · Infection and Immunity · doi:10.1128/iai.68.7.4225-4237.2000 · Cited by 423 · see citing works
Cryptococcus neoformans melanin and virulence: mechanism of action
Wang, Y., Aisen, P., & Casadevall, A. (1995) · Infection and Immunity · doi:10.1128/iai.63.8.3131-3136.1995 · Cited by 411 · see citing works
Effect of the laccase gene CNLAC1, on virulence of Cryptococcus neoformans.
Salas, S. D., Bennett, J. E., Kwon-Chung, K. J., Perfect, J. R., & Williamson, P. R. (1996) · The Journal of Experimental Medicine · doi:10.1084/jem.184.2.377 · Cited by 405 · see citing works
Self-citationCryptococcus neoformans mating and virulence are regulated by the G-protein α subunit GPA1 and cAMPPreprint
Alspaugh, J. A., Perfect, J. R., & Heitman, J. (1997) · Genes & Development · doi:10.1101/gad.11.23.3206 · Cited by 403 · see citing works
Self-citationThe Physiology and Pathophysiology of the Cerebrospinal Fluid
Harik, S. I. (1988) · Neurology · doi:10.1212/wnl.38.1.173-a · Cited by 389 · see citing works
Perfect, J. R., & Casadevall, A. (2002) · Infectious Disease Clinics of North America · doi:10.1016/s0891-5520(02)00036-3 · Cited by 370 · see citing works
Self-citationThe Utilization of Sugars by Yeasts
Barnett, J. A. (1976) · Advances in carbohydrate chemistry and biochemistry · doi:10.1016/s0065-2318(08)60337-6 · Cited by 363 · see citing works
Extracellular phospholipase activity is a virulence factor for Cryptococcus neoformans
Cox, G. M., McDade, H. C., Chen, W., Tucker, S. C., Gottfreðsson, M., Wright, L. C., Sorrell, T. C., Leidich, S. D., Casadevall, A., Ghannoum, M. A., et al. (2001) · Molecular Microbiology · doi:10.1046/j.1365-2958.2001.02236.x · Cited by 362 · see citing works
Self-citationThe glycine cleavage system: Composition, reaction mechanism, and physiological significance
Kikuchi, G. (1973) · Molecular and Cellular Biochemistry · doi:10.1007/bf01659328 · Cited by 361 · see citing works
Heat shock proteins, cellular chaperones that modulate mitochondrial cell death pathways
Parcellier, A., Gurbuxani, S. K., Schmitt, E., Solary, É., & Garrido, C. (2003) · Biochemical and Biophysical Research Communications · doi:10.1016/s0006-291x(03)00623-5 · Cited by 359 · see citing works
Physiology and Pathophysiology of the Cerebrospinal Fluid
Davson, H., Welch, K., & Segal, M. B. (1987) · Medical Entomology and Zoology · Cited by 347 · see citing works
Encapsulation and melanin formation as indicators of virulence in Cryptococcus neoformans
Kwon-Chung, K. J., & Rhodes, J. C. (1986) · Infection and Immunity · doi:10.1128/iai.51.1.218-223.1986 · Cited by 345 · see citing works
Vander, P., Vårum, K. M., Domard, A., Gueddari, N. E. E., & Moerschbacher, B. M. (1998) · PLANT PHYSIOLOGY · doi:10.1104/pp.118.4.1353 · Cited by 339 · see citing works
D’Souza, C. A., Alspaugh, J. A., Yue, C., Harashima, T., Cox, G. M., Perfect, J. R., & Heitman, J. (2001) · Molecular and Cellular Biology · doi:10.1128/mcb.21.9.3179-3191.2001 · Cited by 318 · see citing works
Self-citationChronic cryptococcal meningitis: a new experimental model in rabbits.
Perfect, J. R., Lang, S. D. R., & Durack, D. T. (1980) · PubMed · Cited by 283 · see citing works
Self-citationGenetic Analysis of Glutathione Peroxidase in Oxidative Stress Response of Saccharomyces cerevisiae
Inoue, Y., Matsuda, T., Sugiyama, K., Izawa, S., & Kimura, A. (1999) · Journal of Biological Chemistry · doi:10.1074/jbc.274.38.27002 · Cited by 278 · see citing works
Multispecies outbreak of cryptococcosis on southern Vancouver Island, British Columbia.
Stephen, C., Lester, S., Black, W. A. P., Fyfe, M. W., & Raverty, S. (2002) · PubMed Central · Cited by 269 · see citing works
Shamji, A. F., Kuruvilla, F. G., & Schreiber, S. L. (2000) · Current Biology · doi:10.1016/s0960-9822(00)00866-6 · Cited by 234 · see citing works
Buswell, J. A., Odier, É., & Kirk, T. K. (1987) · Critical Reviews in Biotechnology · doi:10.3109/07388558709086984 · Cited by 232 · see citing works
A Yeast under Cover: the Capsule ofCryptococcus neoformans
Bose, I., Reese, A. J., Ory, J. J., Janbon, G., & Doering, T. L. (2003) · Eukaryotic Cell · doi:10.1128/ec.2.4.655-663.2003 · Cited by 231 · see citing works
Roberts, R. L., Mösch, H., & Fink, G. R. (1997) · Cell · doi:10.1016/s0092-8674(00)80293-7 · Cited by 227 · see citing works
RAS1 regulates filamentation, mating and growth at high temperature of Cryptococcus neoformans
Alspaugh, J. A., Cavallo, L. M., Perfect, J. R., & Heitman, J. (2000) · Molecular Microbiology · doi:10.1046/j.1365-2958.2000.01852.x · Cited by 226 · see citing works
Self-citationStage‐specific gene expression of <i>Candida albicans</i> in human blood
Fradin, C., Kretschmar, M., Nichterlein, T., Gaillardin, C., D’Enfert, C., & Hube, B. (2003) · Molecular Microbiology · doi:10.1046/j.1365-2958.2003.03396.x · Cited by 226 · see citing works
Pedrajas, J. R., Kosmidou, E., Miranda‐Vizuete, A., Gustafsson, J.-Α., Wright, A. P. H., & Spyrou, G. (1999) · Journal of Biological Chemistry · doi:10.1074/jbc.274.10.6366 · Cited by 226 · see citing works
Chitin oligosaccharides elicit lignification in wounded wheat leaves
Barber, M. S., Bertram, R., & Ride, J. P. (1989) · Physiological and Molecular Plant Pathology · doi:10.1016/0885-5765(89)90012-x · Cited by 219 · see citing works
Juhnke, H., Krems, B., Kötter, P., & Entian, K. (1996) · Molecular and General Genetics MGG · doi:10.1007/bf02173011 · Cited by 219 · see citing works
Slekar, K. H., Kosman, D. J., & Culotta, V. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.46.28831 · Cited by 216 · see citing works
Kauss, H., Jeblick, W., & Domard, A. (1989) · Planta · doi:10.1007/bf00391866 · Cited by 212 · see citing works
Alspaugh, J. A., Pukkila-Worley, R., Harashima, T., Cavallo, L. M., Funnell, D. L., Cox, G. M., Perfect, J. R., Kronstad, J. W., & Heitman, J. (2002) · Eukaryotic Cell · doi:10.1128/ec.1.1.75-84.2002 · Cited by 196 · see citing works
Self-citationTrendelenburg, G., Prass, K., Priller, J., Kapinya, K. J., Polley, A., Muselmann, C., Ruscher, K., Kannbley, U., Schmitt, A. O., Castell, S., et al. (2002) · Journal of Neuroscience · doi:10.1523/jneurosci.22-14-05879.2002 · Cited by 189 · see citing works
Mösch, H., Kübler, E., Krappmann, S., et al. (1999) · Molecular Biology of the Cell · doi:10.1091/mbc.10.5.1325 · Cited by 183 · see citing works
Purification and Characterization of Chitin Deacetylase from Colletotrichum lindemuthianum
Tsigos, I., & Bouriotis, V. (1995) · Journal of Biological Chemistry · doi:10.1074/jbc.270.44.26286 · Cited by 163 · see citing works
Klein, C., & Struhl, K. (1994) · Molecular and Cellular Biology · doi:10.1128/mcb.14.3.1920 · Cited by 162 · see citing works
An Immunogenic Onchocerca volvulus Antigen: a Specific and Early Marker of Infection
Lobos, E., Weiss, N., Karam, M., et al. (1991) · Science · doi:10.1126/science.2011741 · Cited by 162 · see citing works
Melanin, melanin “ghosts,” and melanin composition in Cryptococcus neoformans
Wang, Y., Aisen, P., & Casadevall, A. (1996) · Infection and Immunity · doi:10.1128/iai.64.7.2420-2424.1996 · Cited by 162 · see citing works
Roles for inositol-phosphoryl ceramide synthase 1 (IPC1) in pathogenesis ofC. neoformansPreprint
Luberto, C., Toffaletti, D. L., Wills, E. A., Tucker, S. C., Casadevall, A., Perfect, J. R., Hannun, Y. A., & Poeta, M. D. (2001) · Genes & Development · doi:10.1101/gad.856001 · Cited by 150 · see citing works
Self-citationContinued functioning of the secretory pathway is essential for ribosome synthesis.
Mizuta, K., & Warner, J. R. (1994) · Molecular and Cellular Biology · doi:10.1128/mcb.14.4.2493 · Cited by 147 · see citing works
Regulation of Transition Metal Transport across the Yeast Plasma Membrane
Radisky, D. C., & Kaplan, J. (1999) · Journal of Biological Chemistry · doi:10.1074/jbc.274.8.4481 · Cited by 145 · see citing works
Melanisation of Cryptococcus neoformans in human brain tissue
Nosanchuk, J. D., Rosas, Á. L., Lee, S. C., & Casadevall, A. (2000) · The Lancet · doi:10.1016/s0140-6736(00)02356-4 · Cited by 134 · see citing works
Angiolella, L., Facchin, M., Stringaro, A., Maras, B., Simonetti, N., & Cassone, A. (1996) · The Journal of Infectious Diseases · doi:10.1093/infdis/173.3.684 · Cited by 129 · see citing works
Li, Y., Moir, R. D., Sethy-Coraci, I., Warner, J. R., & Willis, I. M. (2000) · Molecular and Cellular Biology · doi:10.1128/mcb.20.11.3843-3851.2000 · Cited by 125 · see citing works
Myo-inositol transport in the central nervous system
Spector, R., & Lorenzo, A. V. (1975) · American Journal of Physiology-Legacy Content · doi:10.1152/ajplegacy.1975.228.5.1510 · Cited by 125 · see citing works
Wang, P., Cardenas, M. E., Cox, G. M., Perfect, J. R., & Heitman, J. (2001) · EMBO Reports · doi:10.1093/embo-reports/kve109 · Cited by 117 · see citing works
Self-citationExtracellular proteinase activity of Cryptococcus neoformans
Chen, L. C., Blank, E. S., & Casadevall, A. (1996) · Clinical and Diagnostic Laboratory Immunology · doi:10.1128/cdli.3.5.570-574.1996 · Cited by 116 · see citing works
Role of the Capsule in Phagocytosis of Cryptococcus neoformans
Kozel, T. R., Pfrommer, G. S., Guerlain, A. S., Highison, B. A., & Highison, G. J. (1988) · Clinical Infectious Diseases · doi:10.1093/cid/10.supplement_2.s436 · Cited by 114 · see citing works
Folate transport in the central nervous system
Spector, R., & Lorenzo, A. V. (1975) · American Journal of Physiology-Legacy Content · doi:10.1152/ajplegacy.1975.229.3.777 · Cited by 113 · see citing works
Histoplasma capsulatum Synthesizes Melanin-Like Pigments In Vitro and during Mammalian Infection
Nosanchuk, J. D., Gómez, B. L., Youngchim, S., Dı́ez, S., Aisen, P., Zancopé‐Oliveira, R. M., Restrepo, Á., Casadevall, A., & Hamilton, A. J. (2002) · Infection and Immunity · doi:10.1128/iai.70.9.5124-5131.2002 · Cited by 107 · see citing works
Temperature-Regulated Transcription in the Pathogenic Fungus Cryptococcus neoformansPreprint
Steen, B. R., Lian, T., Zuyderduyn, S., MacDonald, W. K., Marra, M. A., Jones, S. J. M., & Kronstad, J. W. (2002) · Genome Research · doi:10.1101/gr.80202 · Cited by 101 · see citing works
Self-citationSignal Transduction Pathways Regulating Differentiation and Pathogenicity ofCryptococcus neoformans
Alspaugh, J. A., Perfect, J. R., & Heitman, J. (1998) · Fungal Genetics and Biology · doi:10.1006/fgbi.1998.1079 · Cited by 100 · see citing works
Self-citationHuang, C., Nong, S.-H., Mansour, M. K., Specht, C. A., & Levitz, S. M. (2002) · Infection and Immunity · doi:10.1128/iai.70.10.5485-5493.2002 · Cited by 100 · see citing works
Lee, S. C., Casadevall, A., & Dickson, D. W. (1996) · PubMed · Cited by 91 · see citing works
Wong, B., Perfect, J. R., Beggs, S., & Wright, K. A. (1990) · Infection and Immunity · doi:10.1128/iai.58.6.1664-1670.1990 · Cited by 90 · see citing works
Self-citationMartinez, L. R., García-Rivera, J., & Casadevall, A. (2001) · Journal of Clinical Microbiology · doi:10.1128/jcm.39.9.3365-3367.2001 · Cited by 89 · see citing works
Wang, P., & Heitman, J. (1999) · Current Opinion in Microbiology · doi:10.1016/s1369-5274(99)80063-0 · Cited by 86 · see citing works
Lai, H.-Y., Tam, M. F., Tang, R.-B., Chou, H., Chang, C.-Y., Tsai, J., & Shen, H.-D. (2002) · International Archives of Allergy and Immunology · doi:10.1159/000053862 · Cited by 84 · see citing works
The highly immunogenic enolase and Hsp70p are adventitious Candida albicans cell wall proteins
Eroles, P., Sentandreu, M., Elorza, M. V., & Sentandreu, R. (1997) · Microbiology · doi:10.1099/00221287-143-2-313 · Cited by 83 · see citing works
Deepe, G. S., & Gibbons, R. S. (2002) · Infection and Immunity · doi:10.1128/iai.70.7.3759-3767.2002 · Cited by 80 · see citing works
Melin, P., Schnürer, J., & Wagner, E. (2002) · Molecular Genetics and Genomics · doi:10.1007/s00438-002-0695-0 · Cited by 79 · see citing works
Autoregulation in the Biosynthesis of Ribosomes
Zhao, Y., Sohn, J., & Warner, J. R. (2002) · Molecular and Cellular Biology · doi:10.1128/mcb.23.2.699-707.2003 · Cited by 78 · see citing works
Cryptococcus neoformans: virulence and host defences.
Perfect, J. R., Wong, B., Chang, Y. C., Kwon-Chung, K. J., & Williamson, P. R. (1998) · PubMed · Cited by 75 · see citing works
Self-citationThe role of hsp90 in fungal infection
Matthews, R., & Burnie, J. (1992) · Immunology Today · doi:10.1016/0167-5699(92)90169-8 · Cited by 74 · see citing works
Randhawa, H. S., Mussa, A. Y., & Khan, Z. (2001) · Mycopathologia · doi:10.1023/a:1010906220888 · Cited by 70 · see citing works
Klein, C., & Struhl, K. (1994) · Molecular and Cellular Biology · doi:10.1128/mcb.14.3.1920-1928.1994 · Cited by 70 · see citing works
Rodrigues, M. L., dos Reis, F. C. G., Puccia, R., Travassos, L. R., & Alviano, C. S. (2003) · Microbial Pathogenesis · doi:10.1016/s0882-4010(02)00195-x · Cited by 68 · see citing works
Chang, W. L., van der Heyde, H. C., & Klein, B. S. (1998) · Journal of Immunological Methods · doi:10.1016/s0022-1759(97)00191-9 · Cited by 66 · see citing works
Extracellular proteolytic activity ofCryptococcus neoformans
Aoki, S., Ito‐Kuwa, S., Nakamura, K., Kato, J., Ninomiya, K., & Vidotto, V. (1994) · Mycopathologia · doi:10.1007/bf01138475 · Cited by 65 · see citing works
Akileswaran, L., Brock, B. J., Cereghino, J. L., et al. (1999) · Applied and Environmental Microbiology · doi:10.1128/aem.65.2.415-421.1999 · Cited by 64 · see citing works
Plasminogen-binding activity of enolase in the opportunistic pathogenPneumocystis carinii
Fox, D., & Smulian, A. G. (2001) · Medical Mycology · doi:10.1080/mmy.39.6.495.507 · Cited by 62 · see citing works
Continued Functioning of the Secretory Pathway Is Essential for Ribosome Synthesis
Mizuta, K., & Warner, J. R. (1994) · Molecular and Cellular Biology · doi:10.1128/mcb.14.4.2493-2502.1994 · Cited by 62 · see citing works
Lopez, F., Leube, M. P., Gil‐Mascarell, R., Navarro-Aviñó, J., & Serrano, R. (1999) · Molecular Microbiology · doi:10.1046/j.1365-2958.1999.01267.x · Cited by 57 · see citing works
Kakeya, H., Udono, H., Maesaki, S., Sasaki, E., Kawamura, S., HOSSAIN, M. A., Yamamoto, Y., Sawai, T., Fukuda, M., Mitsutake, K., et al. (1999) · Clinical & Experimental Immunology · doi:10.1046/j.1365-2249.1999.00821.x · Cited by 56 · see citing works
Nonketotic hyperglycinemia: Biochemical, molecular, and neurological aspects
Kure, S., Tada, K., & Narisawa, K. (1997) · The Japanese Journal of Human Genetics · doi:10.1007/bf02766917 · Cited by 55 · see citing works
Kakeya, H., Udono, H., Ikuno, N., Yamamoto, Y., Mitsutake, K., Miyazaki, T., Tomono, K., Koga, H., Tashiro, T., Nakayama, E., et al. (1997) · Infection and Immunity · doi:10.1128/iai.65.5.1653-1658.1997 · Cited by 54 · see citing works
Scheckelhoff, M., & Deepe, G. S. (2002) · The Journal of Immunology · doi:10.4049/jimmunol.169.10.5818 · Cited by 52 · see citing works
Opsonization and phagocytosis of Cryptococcus neoformans.
Kozel, T. R. (1993) · PubMed · Cited by 48 · see citing works
Suvarna, K., Bartiss, A., & Wong, B. (2000) · Microbiology · doi:10.1099/00221287-146-10-2705 · Cited by 47 · see citing works
Holmes, A. R., Collings, A. J., Farnden, K. J. F., et al. (1989) · Microbiology · doi:10.1099/00221287-135-6-1423 · Cited by 44 · see citing works
Blackshaw, S., Kuo, W. P., Park, P. J., Tsujikawa, M., Gunnersen, J. M., Scott, H. S., Boon, W., Tan, S., & Cepko, C. L. (2003) · Genome biology · doi:10.1186/gb-2003-4-3-r17 · Cited by 42 · see citing works
Oxygen as limiting nutrient for growth of Cryptococcus neoformans
Odds, F. C., Backer, T. D., Dams, G., et al. (1995) · Journal of Clinical Microbiology · doi:10.1128/jcm.33.4.995-997.1995 · Cited by 39 · see citing works
The hsp60 gene of the human pathogenic fungus Coccidioides immitis encodes a T-cell reactive protein
Thomas, P. W., Wyckoff, E. E., Pishko, E. J., Yu, J., Kirkland, T. N., & Cole, G. T. (1997) · Gene · doi:10.1016/s0378-1119(97)00351-x · Cited by 32 · see citing works
Can transcriptome size be estimated from SAGE catalogs?
Stern, M. D., Anisimov, S. V., & Boheler, K. R. (2003) · Bioinformatics · doi:10.1093/bioinformatics/btg018 · Cited by 31 · see citing works
Perfect, J. R., Hobbs, M. M., Granger, D. L., et al. (1988) · Infection and Immunity · doi:10.1128/iai.56.4.849-854.1988 · Cited by 27 · see citing works
Self-citationZalkin, H. (1985) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(85)13042-9 · Cited by 25 · see citing works
Leukocyte subpopulations in cerebrospinal fluid of normal rabbits.
Curiel, T. J., Perfect, J. R., & Durack, D. T. (1982) · PubMed · Cited by 13 · see citing works
Self-citationIsolation and characterisation of an anticryptococcal protein in human cerebrospinal fluid
Ahluwalia, M., Brummer, E., SRIDHAR, S., SINGH, R., & Stevens, D. A. (2001) · Journal of Medical Microbiology · doi:10.1099/0022-1317-50-1-83 · Cited by 8 · see citing works
The expression ofCandida albicansenolase is not heat shock inducible
Franklyn, K. M., & Warmington, J. R. (1994) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1994.tb06831.x · Cited by 8 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Shingu-Vazquez, M., & Traven, A. (2011) · Eukaryotic Cell · doi:10.1128/ec.05184-11 · Cited by 209 · see citing works
Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts
D’Souza, C. A., Kronstad, J. W., Taylor, G., Warren, R., Yuen, M., Hu, G., Jung, W. H., Sham, A., Kidd, S. E., Tangen, K., et al. (2011) · mBio · doi:10.1128/mbio.00342-10 · Cited by 202 · see citing works
Self-citationMetabolism in fungal pathogenesis
Ene, I. V., Brunke, S., Brown, A. J. P., & Hube, B. (2014) · Cold Spring Harbor Perspectives in Medicine · doi:10.1101/cshperspect.a019695 · Cited by 169 · see citing works
Vu, K., Tham, R., Uhrig, J. P., Thompson, G. R., Na Pombejra, S., Jamklang, M., Bautos, J. M., & Gelli, A. (2014) · mBio · doi:10.1128/mbio.01101-14 · Cited by 159 · see citing works
Thammahong, A., Puttikamonkul, S., Perfect, J. R., Brennan, R. G., & Cramer, R. A. (2017) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00053-16 · Cited by 125 · see citing works
Self-citationFungal Hsp90: a biological transistor that tunes cellular outputs to thermal inputs
Leach, M. D., Klipp, E., Cowen, L. E., & Brown, A. J. P. (2012) · Nature Reviews Microbiology · doi:10.1038/nrmicro2875 · Cited by 107 · see citing works
Cordeiro, R. D. A., Evangelista, A. J. D. J., Serpa, R., Marques, F. J. D. F., Melo, C. V. S. D., Oliveira, J. S. D., Franco, J. D. S., Alencar, L. P. D., Bandeira, T. D. J. P. G., Brilhante, R. S. N., et al. (2016) · Microbiology · doi:10.1099/mic.0.000222 · Cited by 63 · see citing works
Chayakulkeeree, M., Rude, T. H., Toffaletti, D. L., & Perfect, J. R. (2007) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.00442-07 · Cited by 56 · see citing works
Fu, C., Beattie, S. R., Jezewski, A. J., Robbins, N., Whitesell, L., Krysan, D. J., & Cowen, L. E. (2022) · Genetics · doi:10.1093/genetics/iyab164 · Cited by 31 · see citing works
Iron acquisition in the human fungal pathogen Cryptococcus neoformans
Jung, W. H., & Do, E. (2013) · Current Opinion in Microbiology · doi:10.1016/j.mib.2013.07.008 · Cited by 18 · see citing works
- Authors
- Steen, B. R., Zuyderduyn, S., Toffaletti, D. L., Marra, M., Jones, S. J. M., Perfect, J. R., & Kronstad, J.
- Affiliations
- University of British Columbia (CA)
- BC Cancer Agency (CA)
- Corresponding author
- Kronstad, J.
- Venue
- Eukaryotic Cell
- Publisher
- American Society for Microbiology
- Published
- 2003-12
- Volume
- 2
- Issue
- 6
- Pages
- 1336-1349
- ISSN
- 1535-9778 (ISSN-L)
- 1535-9786
- PMC
- PMC326655
- OpenAlex
- W2158372574
- Cited by
- 123
- References
- 102
- Citations by year
- 2026: 3 · 2025: 4 · 2024: 4 · 2023: 3 · 2022: 2 · 2021: 4 · 2020: 4 · 2019: 5 · 2017: 5 · 2016: 4 · 2015: 4 · 2014: 19 · 2013: 8 · 2012: 4
- FWCI
- 5.14
- Type
- journal article
- Language
- en
- Open access
- diamond
- doi.org
- Locations
- Eukaryotic Cell (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Burroughs Wellcome Fund
- University of Oklahoma
- Michael Smith Health Research BC
- Canadian Institutes of Health Research
- National Institute of Allergy and Infectious Diseases (R56AI028388, AI28388, R01AI028388)
- Topics
- Health Sciences › Medicine › Epidemiology › Fungal Infections and Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Fungal and yeast genetics research
- Life Sciences › Immunology and Microbiology › Microbiology › Bacterial Infections and Vaccines
- Keywords
- Cryptococcus neoformans, cryptococcal meningitis, gene expression profiling, serial analysis of gene expression, blood-brain barrier penetration, central nervous system adaptation, cerebrospinal fluid infection, rabbit model, stress response, energy metabolism, protein synthesis, small molecule transport
- MeSH terms
- Animals, Cerebrospinal Fluid, Cryptococcus neoformans, Genes, Fungal, Rabbits, Gene Library, Gene Expression Regulation, Fungal, Databases, Factual, Meningitis, Cryptococcal, Expressed Sequence Tags, Gene Expression Profiling
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review