Cited by 117Animal Virus Infections StudiesZoonotic diseases and public healthViral gastroenteritis research and epidemiology

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Identification of Multiple Novel Viruses, Including a Parvovirus and a Hepevirus, in Feces of Red Foxes

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Bodewes, Rogier, van der Giessen, Joke, Haagmans, Bart L., Osterhaus, Albert D. M. E., Smits, Saskia L.·2013·Journal of Virology

DOI 10.1128/jvi.00568-13PMC PMC3700315

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Abstract

Red foxes ( Vulpes vulpes ) are the most widespread members of the order of Carnivora . Since they often live in (peri)urban areas, they are a potential reservoir of viruses that transmit from wildlife to humans or domestic animals. Here we evaluated the fecal viral microbiome of 13 red foxes by random PCR in combination with next-generation sequencing. Various novel viruses, including a parvovirus, bocavirus, adeno-associated virus, hepevirus, astroviruses, and picobirnaviruses, were identified.

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Background
Identification of circular single-stranded DNA viruses in faecal samples of Canada lynx (Lynx canadensis), moose (Alces alces) and snowshoe hare (Lepus americanus) inhabiting the Colorado San Juan Mountains.
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BackgroundInfluential
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MethodSelf-citation
Metagenomic analysis of Sichuan takin fecal sample viromes reveals novel enterovirus and astrovirus.
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First Detection of Hepatitis E Virus (Rocahepevirus ratti Genotype C1) in Synanthropic Norway Rats (Rattus norvegicus) in Romania
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“Strains related to ferrets and rat hepeviruses have also been detected in foxes in The Netherlands and Germany [9,10].”
Background
Characterization of self-assembled virus-like particles of dromedary camel hepatitis e virus generated by recombinant baculoviruses
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“In addition to humans, other animals such as chickens, bats, rats, rabbits, mongooses, foxes, moose, minks, ferrets, and even fish also harbor HEVs, including a number of genetically distant strains (Batts et al., 2011; Bodewes et al., 2013; Drexler et al., 2012; Haqshenas et al., 2001; Jay Lin et al., 2014; Johne et…”
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“8% prevalence of FPV in red foxes in other areas of Italy [13] and might be due to the fox susceptibility to Carnivore protoparvovirus 4 species, of which the prototype virus has been identified in a red fox [29].”
Background
Picobirnaviruses: prevalence, genetic diversity, detection methods
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Hepatitis E virus infection in farmed rabbits and swine in the Eastern Chinese city Lianyungang: Showing no potential interspecies transmission
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“…species, including chickens, deer, mongooses, foxes, ferrets, rats, bats, wild boars, and trout [Haqshenas et al., 2001; Nakamura et al., 2006; Tomiyama et al., 2009; Johne et al., 2010; Batts et al., 2011; Takahashi et al., 2011; Drexler et al., 2012; Raj et al., 2012; Bodewes et al., 2013].”
Background
Staat van Zoönosen 2017
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“…chickens, bats, and cutthroat trout (Haqshenas et al. 2001; Zhao et al. 2009; Johne et al. 2010a; Batts et al. 2011; Drexler et al. 2012; Raj et al. 2012; Yamamoto et al. 2012; Bodewes et al. 2013; Krog et al. 2013; Lin et al. 2014; Takahashi et al. 2014; Woo et al. 2014; Reuter et al. 2016).”
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A broadly cross-reactive monoclonal antibody against hepatitis E virus capsid antigen
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“In addition to human pathogenic HEV, related viruses have been identified in fowl, rats, bats, carnivores and even in fish (Batts et al. 2011; Bodewes et al. 2013; Drexler et al. 2012; Johne et al. 2010a, b; Krog et al. 2013; Raj et al. 2012).”
Background
Structural characterization of a bat Adeno-associated virus capsid
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Rat hepatitis E virus (Rocahepevirus ratti) exposure in cats and dogs, Hong Kong
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“Red foxes, also members of the family Canidae , have been putatively linked to a Rocahepevirus -like HEV variant that is distantly related to vole HEV ( Rocahepevirus eothenomi ) [44,45].”
Background
A new perspective on the evolution and diversity of the genus Amdoparvovirus (family Parvoviridae) through genetic characterization, structural homology modeling, and phylogenetics
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Background
Structural and antigenic characterization of the avian adeno-associated virus capsid
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Metagenome-Assembled Viral Genomes Analysis Reveals Diversity and Infectivity of the RNA Virome of Gerbillinae Species
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“Since then, carnivore-derived HEV-C2 strains have been detected in liver and faecal specimens from farmed American minks in Denmark [13] and in faeces of red foxes in the Netherlands, Germany, and Hungary [12,15,16].”
Background
Detection of picobirnaviruses in vervet monkeys (Chlorocebus sabaeus): Molecular characterization of complete genomic segment-2.
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“…wild boars, rats (Rattus spp.), rabbits, ferrets (Mustela putorius furo), minks (Neovison vison), foxes (Vulpes vulpes) and bats (Chiroptera spp.) (Bodewes et al., 2013; Drexler et al., 2012; Johne et al., 2010a, 2010b; Krog et al., 2013; Lhomme et al., 2013; Raj et al., 2012; Takahashi et al.,…”
Background
Identification of further diversity among posaviruses
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Identification of Hepatitis E Virus in the Feces of Red Foxes (Vulpes vulpes)
Lanszki, Z., Kurucz, K., Zeghbib, S., Kemenesi, G., Lanszki, J., & Jakab, F. (2020) · Animals · doi:10.3390/ani10101841 · Cited by 12
“Furthermore, it showed a lower nucleotide similarity (85%) to Fox Hepatitis E virus described previously in fecal samples of the red fox (KC692370) from the Netherlands [8].”
BackgroundResult
Endemic Skunk amdoparvovirus in free-ranging striped skunks (Mephitis mephitis) in California.
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“…of hosts, including humans (Smits et al., 2012), rabbits (Ludert et al., 1995; Green et al., 1999), pigs (Martínez et al., 2010; Smits et al., 2011), cattle (Ghosh et al., 2009), horses (Ganesh et al., 2011), birds (Chandra, 1997), monkeys (Wang et al., 2007; 2012) and foxes (Bodewes et al., 2013).”
Background
Detection and molecular characterization of picobirnaviruses in the wild birds: identification of a novel picobirnavirus possessing yeast mitochondrial genetic code.
Ullah, K., Mehmood, A., Chen, X., Dar, M., Yang, S.-X., & Zhang, W. (2021) · Virus Research · doi:10.1016/j.virusres.2021.198624 · Cited by 9
The amazing AAV capsids: Into the structure-verse
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Genome-wide target enriched viral sequencing reveals extensive ‘hidden’ salmonid alphavirus diversity in farmed and wild fish populations
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“18,19 Using PCR to amplify AAV is a straightforward and effective means for discovering novel AAV capsid sequences.”
Trends and Challenges in the Detection and Environmental Surveillance of the Hepatitis E Virus
Elois, M., Pavi, C. P., Jempierre, Y. F. S. H., Pilati, G. V. T., Zanchetta, L., Grisard, H. B. D. S., García, N., Rodríguez-Lázaro, D., & Fongaro, G. (2025) · Microorganisms · doi:10.3390/microorganisms13050998 · Cited by 6
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Newlavirus, a Novel, Highly Prevalent, and Highly Diverse Protoparvovirus of Foxes (Vulpes spp.)
Canuti, M., Bouchard, É., Rodrigues, B., Whitney, H., Hopson, M., Gilroy, C., Stenson, G., Dufour, S., Lang, A. S., & Verhoeven, J. (2021) · Viruses · doi:10.3390/v13101969 · Cited by 6
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Background
First Report of Skunk Amdoparvovirus (Species Carnivore amdoparvovirus 4) in Europe in a Captive Striped Skunk (Mephitis mephitis)
Kaiser, F., de le Roi, M., Jo, W., Gerhauser, I., Molnár, V., Osterhaus, A., Baumgärtner, W., & Ludlow, M. (2023) · Viruses · doi:10.3390/v15051087 · Cited by 5
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“Consistent with the organization of segment 1 of other genogroup I PBVs [18,35,36], a short ORF was observed upstream of the capsid protein, with complete sequences of 136 to 225 amino acids determined from 15C, 17C, and 78C (Table 2).”
Background
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Pinto, M., de Oliveira, J. D., & González, J. (2017) · doi:10.1007/978-3-319-54567-7_7 · Cited by 3
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“…viral diversity across taxa and geographical regions: novel members of the Parvoviridae and Hepeviridae family in red foxes in the Netherlands [12], diverse Astroviridae members in wild boars and cervids [18–20], and novel Picornaviridae and Picobirnaviridae in small carnivores and rodents…”
Influential
Diversity of viral communities in faecal samples of farmed red foxes
Zhang, D., Wang, Y., Chen, X., He, Y., Zhao, M., Lü, X., Lü, J., Ji, L., Shen, Q., Wang, X., et al. (2023) · Heliyon · doi:10.1016/j.heliyon.2023.e12826 · Cited by 1
Red fox viromes across an urban-rural gradientPreprint
Campbell, S. J., Ashley, W., Gil-Fernández, M., Newsome, T., Giallonardo, F. D., Ortiz-Baez, A., Mahar, J., Towerton, A. L., Gillings, M., Holmes, E., et al. (2020) · bioRxiv · doi:10.1101/2020.06.15.153858 · Cited by 1
“95 Although red foxes are known to harbour a diversity of viruses (27, 28), it is unknown whether urban and 96 rural foxes have different viral compositions.”
BackgroundResultInfluential

Authors: Bodewes, R., van der Giessen, J., Haagmans, B. L., Osterhaus, A. D. M. E., & Smits, S. L.
Affiliations: Erasmus MC (NL)
National Institute for Public Health and the Environment (NL)
ORCID: Bodewes, Rogier
van der Giessen, Joke
Haagmans, Bart L.
Osterhaus, Albert D. M. E.
Venue: Journal of Virology
Publisher: American Society for Microbiology
Published: 2013-07
Volume: 87
Issue: 13
Pages: 7758-7764
ISSN: 0022-538X (ISSN-L)
1098-5514
DOI: 10.1128/jvi.00568-13
PMC: PMC3700315
OpenAlex: W2016522317
Cited by: 117
References: 56
Citations by year: 2026: 3 · 2025: 5 · 2024: 3 · 2023: 7 · 2022: 6 · 2021: 8 · 2020: 12 · 2019: 7 · 2018: 12 · 2017: 9 · 2016: 5 · 2015: 13 · 2014: 21 · 2013: 5
FWCI: 24.28
Type: journal article
Language: en
Open access: green
www.ncbi.nlm.nih.gov
Licence: journals.asm.org/non-commercial-tdm-license (tdm)
Locations: Journal of Virology (publishedVersion)
PubMed Central (publishedVersion)
PubMed (publishedVersion)
EUR Research Repository (Erasmus University Rotterdam) (publishedVersion)
EUR Research Repository (Erasmus University Rotterdam) (submittedVersion)
RePub (Erasmus University Rotterdam) (submittedVersion, other-oa)
Utrecht University Repository (Utrecht University) (submittedVersion)
Rivm Repository (Netherlands National Institute for Public Health and the Environment) (submittedVersion)
Topics: Life Sciences › Agricultural and Biological Sciences › Animal Science and Zoology › Animal Virus Infections Studies
Health Sciences › Medicine › Public Health, Environmental and Occupational Health › Zoonotic diseases and public health
Health Sciences › Medicine › Infectious Diseases › Viral gastroenteritis research and epidemiology
Keywords: red fox, novel virus, parvovirus, bocavirus, adeno-associated virus, astrovirus, wildlife reservoirs, zoonotic transmission, viral metagenomics
MeSH terms: Amino Acid Sequence, Animals, Base Sequence, Disease Reservoirs, Feces, Foxes, Models, Genetic, Molecular Sequence Data, Phylogeny, Species Specificity, Likelihood Functions, Polymerase Chain Reaction, Sequence Analysis, DNA, Parvovirus, Picobirnavirus, Astroviridae, Hepevirus, Metagenome

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Identification of Multiple Novel Viruses, Including a Parvovirus and a Hepevirus, in Feces of Red Foxes

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