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Mice Lacking Histone Deacetylase 6 Have Hyperacetylated Tubulin but Are Viable and Develop Normally
Open accessAbstract
Posttranslational modifications play important roles in regulating protein structure and function. Histone deacetylase 6 (HDAC6) is a mostly cytoplasmic class II HDAC, which has a unique structure with two catalytic domains and a domain binding ubiquitin with high affinity. This enzyme was recently identified as a multisubstrate protein deacetylase that can act on acetylated histone tails, alpha-tubulin and Hsp90. To investigate the in vivo functions of HDAC6 and the relevance of tubulin acetylation/deacetylation, we targeted the HDAC6 gene by homologous recombination in embryonic stem cells and generated knockout mice. HDAC6-deficient mice are viable and fertile and show hyperacetylated tubulin in most tissues. The highest level of expression of HDAC6 is seen in the testis, yet development and function of this organ are normal in the absence of HDAC6. Likewise, lymphoid development is normal, but the immune response is moderately affected. Furthermore, the lack of HDAC6 results in a small increase in cancellous bone mineral density, indicating that this deacetylase plays a minor role in bone biology. HDAC6-deficient mouse embryonic fibroblasts show apparently normal microtubule organization and stability and also show increased Hsp90 acetylation correlating with impaired Hsp90 function. Collectively, these data demonstrate that mice survive well without HDAC6 and that tubulin hyperacetylation is not detrimental to normal mammalian development.
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“HDAC6, a tubulin deacetylase [24].”
From Elevated SGK1 increases Tau phosphorylation and microtubule instability in Alzheimer’s patient-derived cortical neurons (2026) · cites this paper as [32]
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Curriculum vitae of HDAC6 in solid tumors
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How Influenza Virus Uses Host Cell Pathways during Uncoating
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Self-citationEffects of downregulated HDAC6 expression on the proliferation of lung cancer cells
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InfluentialThe Protein Farnesyltransferase Regulates HDAC6 Activity in a Microtubule-dependent Manner
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“The immune response is slightly affected and the mice present a small increase in cancellous bone mineral density but show not detrimental development [100].”
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“Due to their low toxicity to normal mammalian cells [40,41] we, and others, have hypothesized that hHDAC6 inhibitors might be a better starting point for the development of parasite-selective anti-plasmodial HDACi [37,42].”
BackgroundThe role of Runx2 in facilitating autophagy in metastatic breast cancer cells
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“The genetic deletion of HDAC-6 in mice elevated tubulin acetylation in most tissues (Zhang et al., 2008) and HDAC-6 interaction with Runx2 has been previously demonstrated (Westendorf et al.”
BackgroundInfluentialHDAC6 deacetylates alpha tubulin in sperm and modulates sperm motility in Holtzman rat
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Endothelial Cell Mechano-Metabolomic Coupling to Disease States in the Lung Microvasculature
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“For instance, cigarette smoke exacerbates LPS induced ALI in vivo and EC barrier dysfunction in vitro via increased susceptibility to histone deacetylase 6 (HDAC6) phosphorylation, which deacetylates MTs and reduces barrier function, thus promulgating ALI (Kratzer et al., 2012; Borgas et al., 2016; Karki et al., 2019).”
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HDAC2 regulates FoxO1 during RANKL-induced osteoclastogenesis
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“in hdac6 knockout mice.(45) In addition, class I HDACi such as Romidepsin, which induces a thrombocytopenia, have a minor effect on HDAC6.”
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“HDAC6 knockout mice are viable and fertile and do not show overt physiological dysfunctions (5).”
The class II histone deacetylases as therapeutic targets for Parkinson’s disease
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“It was reported that mice lacking HDAC6 develop normally with normal major organ function (35), implying that inhibition of HDAC6 may not cause major adverse events; thus, HDAC6 selective inhibitors are considered promising agents for cancer treatment.”
BackgroundLoss of HDAC11 accelerates skeletal muscle regeneration in mice
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HDAC6 as a potential therapeutic target for peripheral nerve disorders
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“viable, fertile, and appear to have no overall phenotype, and in fact, have been reported to manifest enhanced cognition [185,186].”
BackgroundSingh, H., Wray, N. H., Schappi, J. M., & Rasenick, M. M. (2018) · Neuropsychopharmacology · doi:10.1038/s41386-018-0016-x · Cited by 34
“HDAC6 KO mice show increased amounts of acetylated α -tubulin in different tissues, including brain [55].”
RetractedZhang, J., Ma, J., Trinh, R. T. P., Heijnen, C. J., & Kavelaars, A. (2021) · Brain Behavior and Immunity · doi:10.1016/j.bbi.2021.12.005 · Cited by 37
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“Since HDAC6 KO mice do not show abnormal function of major organs [31], there may promise in developing HDAC6 inhibitors as drugs for use in the prevention and/or treatment of chronic complications like peritoneal fibrosis.”
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Neuronal complexity is attenuated in preclinical models of migraine and restored by HDAC6 inhibition
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“Additionally, constitutive knockout of HDAC6 produces viable offspring with few phenotypic changes (Zhang et al., 2008).”
BackgroundMaharaj, K. K., Powers, J. J., Mediavilla-Varela, M., Achille, A. N., Gamal, W. M., Quayle, S. N., Jones, S. S., Sahakian, E., & Pinilla-Ibarz, J. A. (2020) · Frontiers in Immunology · doi:10.3389/fimmu.2020.590072 · Cited by 34
“CLL Mouse Model An HDAC6-deficient CLL murine model (Em-TCL1/ HDAC6KO) was generated by crossing HDAC6KO (18) and Em-TCL1 (19) (C57BL/6 background) mice.”
MethodImpaired autophagy triggered by HDAC9 in mesenchymal stem cells accelerates bone mass loss
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HDAC expression and activity is upregulated in diseased lupus-prone mice
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Discovery of HDAC6-Selective Inhibitor NN-390 with in Vitro Efficacy in Group 3 Medulloblastoma
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HDAC6 Degradation Inhibits the Growth of High-Grade Serous Ovarian Cancer Cells
Ali, A., Zhang, F., Maguire, A., Byrne, T., Weiner‐Gorzel, K., Bridgett, S., O’Toole, S. A., O’Leary, J. J., Beggan, C., Fitzpatrick, P., et al. (2020) · Cancers · doi:10.3390/cancers12123734 · Cited by 36
Yanda, M. K., Liu, Q., Cebotaru, V., Guggino, W. B., & Cebotaru, L. (2017) · Journal of Biological Chemistry · doi:10.1074/jbc.m117.803775 · Cited by 40
“Interestingly, mice lacking HDAC6 are viable and fertile and have no gross morphological abnormalities (45); this observation has important implications for the safety of potential therapeutic inhibition of HDAC6.”
BackgroundForcioli-Conti, N., Estève, D., Bouloumié, A., Dani, C., & Peraldi, P. (2015) · Biochimie · doi:10.1016/j.biochi.2015.09.011 · Cited by 31
Haakenson, J., & Zhang, X. M. (2013) · International Journal of Molecular Sciences · doi:10.3390/ijms14059514 · Cited by 31
“It seems to play a bigger role in bone development, where decreased HDAC6 results in increased cancellous bone mineral density [79].”
BackgroundInhibitors selective for HDAC6 in enzymes and cells
Gupta, P. K., Reid, R. C., Liu, L., Lucke, A. J., Broomfield, S., Andrews, M. R., Sweet, M. J., & Fairlie, D. P. (2010) · Bioorganic & Medicinal Chemistry Letters · doi:10.1016/j.bmcl.2010.09.100 · Cited by 31
Zhou, D., Choi, Y., & Kim, J. (2017) · Scientific Reports · doi:10.1038/s41598-017-08650-2 · Cited by 35
Barter, M. J., Butcher, A., Wang, H., Tsompani, D., Galler, M., Rumsby, E. L., Culley, K. L., Clark, I. M., & Young, D. A. (2022) · Scientific Reports · doi:10.1038/s41598-022-10518-z · Cited by 34
Targeting the photoreceptor cilium for the treatment of retinal diseases
Ran, J., & Zhou, J. Y. (2020) · Acta Pharmacologica Sinica · doi:10.1038/s41401-020-0486-3 · Cited by 29
“HDAC6-deficient mice also appear to be superficially normal under standard laboratory conditions [69].”
BackgroundKim, J.-Y., Hwang, H.-G., Lee, J., Kim, J., & Kim, J. (2020) · Molecular Brain · doi:10.1186/s13041-020-00644-y · Cited by 34
Dudakovic, A., Gluscevic, M., Paradise, C. R., Dudakovic, H., Khani, F., Thaler, R., Ahmed, F. S., Li, X., Dietz, A. B., Stein, G. S., et al. (2017) · Gene · doi:10.1016/j.gene.2017.01.019 · Cited by 29
“…knockout, knock-down or chemical inhibition in mouse models typically has negative effects on skeletal development and bone mineral density (Bradley et al., 2015; Gordon et al., 2015; McGee-Lawrence et al., 2011; Pratap et al., 2010; Razidlo et al., 2010; Senn et al., 2010; Zhang et al., 2008).”
Synthesis of benzothiophene-based hydroxamic acids as potent and selective HDAC6 inhibitors
Vreese, R. D., Steen, N. V., Verhaeghe, T., Desmet, T., Bougarne, N., Bosscher, K. D., Benoy, V., Haeck, W., Bosch, L. V. D., & D’hooghe, M. (2015) · Chemical Communications · doi:10.1039/c5cc03295d · Cited by 32
Melchionda, L., Fang, M., Wang, H., Fugnanesi, V., Morbin, M., Liu, X., Li, W., Ceccherini, I., Farina, L., Savoiardo, M., et al. (2013) · Orphanet Journal of Rare Diseases · doi:10.1186/1750-1172-8-66 · Cited by 24
“As for mammalian models, although a first strain of HDAC6 knockout (KO) mice presented no sign of neurodegeneration, [29] altered emotional behaviors suggested a contribution of HDAC6 to maintain proper neuronal activity [30].”
BackgroundDepression of mitochondrial metabolism by downregulation of cytoplasmic deacetylase, HDAC6
Kamemura, K., Ogawa, M., Ohkubo, S., Ohtsuka, Y., Shitara, Y., Komiya, T., Maeda, S., Ito, A., & Yoshida, M. (2012) · FEBS Letters · doi:10.1016/j.febslet.2012.03.060 · Cited by 29
“HDAC6-deficient mouse embryonic fibroblast (MEF) cell line is described in the literature [15].”
BackgroundPolarity in Cell-Fate Acquisition in the Early Mouse Embryo
Leung, C. Y., Zhu, M., & Zernicka‐Goetz, M. (2016) · Current topics in developmental biology/Current Topics in Developmental Biology · doi:10.1016/bs.ctdb.2016.04.008 · Cited by 41
Macrophage migration inhibitory factor (MIF) acetylation protects neurons from ischemic injury
Hu, J., Ma, W.-J., He, L., Zhang, C.-H., Zhang, C., Wang, Y., Chen, C.-N., Shen, D., Gao, H.-M., Guo, R.-R., et al. (2022) · Cell Death and Disease · doi:10.1038/s41419-022-04918-2 · Cited by 30
“RESULTS HDAC6 suppression protects against ischemia-induced brain injury HDAC6 is expressed in the mouse brain [27].”
BackgroundRoles for α-Synuclein in Gene Expression
Somayaji, M., Lanseur, Z., Choi, S. J., Sulzer, D., & Mosharov, E. V. (2021) · Genes · doi:10.3390/genes12081166 · Cited by 32
“Although pharmacological inhibition of HDAC activity is currently under investigation as disease modifying PD therapy [100,109], some of their effects may be mediated by mechanisms unrelated to histone acetylation, such as microtubule stabilization [110,111].”
BackgroundOpportunities for histone deacetylase inhibition in amyotrophic lateral sclerosis
Klingl, Y. E., Pakravan, D., & Bosch, L. V. D. (2020) · British Journal of Pharmacology · doi:10.1111/bph.15217 · Cited by 33
“Genetic ablation as well as nuclear localization of HDAC1 was neuroprotective (Zhu et al., 2017).”
BackgroundKankel, M. W., Sen, A., Lü, L., Theodorou, M., Dimlich, D. N., McCampbell, A., Henderson, C. E., Shneider, N. A., & Artavanis‐Tsakonas, S. (2020) · Genetics · doi:10.1534/genetics.119.302985 · Cited by 35
Chen, J., Zhang, J., Shaik, N. F., Yi, B., Wei, X., Yang, X., Naik, U. P., Summer, R. S., Yan, G., Xu, X., et al. (2019) · Journal of Biological Chemistry · doi:10.1074/jbc.ra119.011317 · Cited by 36
“Among 18 HDACs in mammals, HDAC6 is a unique member of the type II HDACs that has been shown to regulate cytoskeleton dynamics by acting as a specific -tubulin deacetylase (18, 22), which prompted us to investigate whether inhibition of HDAC6 could alter eNOS gene expression through modulating cytoskeleton dynamics in…”
BackgroundLi, X., Mei, Y., Yan, B., Vitriol, E. A., Huang, S., Ji, P., & Qiu, Y. (2017) · Haematologica · doi:10.3324/haematol.2016.161513 · Cited by 34
“It is worth mentioning that HDAC6 knockout mice are viable with no developmental defect.(23,43) Although the mice have hyperacetylated tubulin and elevated acetylated HSP90, they do not have significant cellular defects, as shown in transient knockdown cell lines,(18,43) suggesting that germline deletion of HDAC6 may…”
BackgroundPsychiatric behaviors associated with cytoskeletal defects in radial neuronal migration
Fukuda, T., & Yanagi, S. (2017) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-017-2539-4 · Cited by 31
“HDAC6 knockout mice are reported to be viable and fertile, and show no obvious phenotypic changes [145].”
Ahmad, M., Hamid, A., Hussain, A., Majeed, R., Qurishi, Y., Bhat, J. A., Najar, R. A., Qazi, A. K., Zargar, M. A., Singh, S. K., et al. (2012) · DNA and Cell Biology · doi:10.1089/dna.2011.1575 · Cited by 27
Protein lysine acetylation and its role in different human pathologies: a proteomic approach
Morales-Tarré, O., Alonso-Bastida, R., Arcos-Encarnación, B., Pérez‐Martínez, L., & Encarnación‐Guevara, S. (2021) · Expert Review of Proteomics · doi:10.1080/14789450.2021.2007766 · Cited by 30
“This HADC, primarily localized in the cytoplasm, is the only HDAC described so far that possesses a C-terminal zinc finger and two deacetylase domains [62].”
BackgroundThe emerging role of tubulin posttranslational modifications in cilia and ciliopathies
He, K., Ling, K., & Hu, J. (2020) · Biophysics Reports · doi:10.1007/s41048-020-00111-0 · Cited by 25
LoPresti, P. (2019) · Frontiers in Neurology · doi:10.3389/fneur.2019.00519 · Cited by 30
Knox, T. J., Sahakian, E., Banik, D., Hadley, M. M., Palmer, E., Noonepalle, S. K. R., Kim, J. S., Powers, J. J., Gracia-Hernandez, M., Oliveira, V. A., et al. (2019) · Scientific Reports · doi:10.1038/s41598-019-51403-6 · Cited by 118
Developing selective histone deacetylases (HDACs) inhibitors through ebselen and analogs
Wang, Y., Wallach, J. V., Duane, S., Wang, Y., Wu, J., Wang, J., Adejare, A., & Ma, H. (2017) · Drug Design Development and Therapy · doi:10.2147/dddt.s124977 · Cited by 32
“Mice lacking HDAC6 are viable and have greatly elevated tubulin acetylation in multiple organs.(27) In addition, they exhibit a moderately impaired immune response and bone homeostasis.”
Jeong, S., & Cho, G. (2016) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2016.11.031 · Cited by 29
Cui, Y., Deng, J., Zhang, Y., Du, L., Jiang, F., Li, C., Chen, W., Zhang, H., & He, Z. (2025) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-025-05831-5 · Cited by 28
“…earliest identified PTMs affecting transcriptional regulation, adds negative changes Transcriptional activation Hdac6 -deficient mice are fertile [ 92]; Tip60 −/− mice appear to be arrested at the round spermatids [90]. are lost, which facilitates genome-wide DNA demethylation and epigenetic…”
Self-citationHu, W., Zhang, R., Xu, H., Li, Y., Yang, X.-J., Zhou, Z., Huang, X., Wang, Y., Ji, W., Gao, F., et al. (2023) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2313787120 · Cited by 32
“Analogously, previous studies have reported that mice lacking HDAC6 (Histone Deacetylase 6) exhibit hyperacetylated microtubules, but it does not affect testis architecture, fertility, and sperm count (36).”
BackgroundKundu, A. B., Gali, S., Sharma, S., Kacew, S., Yoon, S., Jeong, H. G., Kwak, J. H., & Kim, H. S. (2023) · International Journal of Biological Sciences · doi:10.7150/ijbs.80743 · Cited by 31
“Upon stimulation, JNK/p38 and Smad, regulate apoptosis, whereas the activation of transcription factors leads to epithelial to mesenchymal transition (EMT) [17, 18].”
Identification of HDAC10 Inhibitors that Modulate Autophagy in Transformed Cells
Zeyen, P., Zeyn, Y., Herp, D., Mahmoudi, F., Yesiloglu, T. Z., Erdmann, F., Schmidt, M., Robaa, D., Romier, C., Ridinger, J., et al. (2022) · European Journal of Medicinal Chemistry · doi:10.1016/j.ejmech.2022.114272 · Cited by 36
HDAC6 Regulates Radiosensitivity of Non-Small Cell Lung Cancer by Promoting Degradation of Chk1
Moses, N., Zhang, M., Wu, J.-Y., Chen, H., Xiang, S., Malysa, A., Jang, H., Chen, W., Bai, W., Bepler, G., et al. (2020) · Cells · doi:10.3390/cells9102237 · Cited by 28
“In particular, HDAC6 knockout mice develop normally, which makes HDAC6 an ideal target in cancer treatment [15].”
BackgroundHuang, F.-I., Wu, Y.-W., Sung, T.-Y., Liou, J., Lin, M., Pan, S., & Yang, C. (2019) · Frontiers in Oncology · doi:10.3389/fonc.2019.00249 · Cited by 26
“A previous report has demonstrated that HDAC6deficient mice are viable and normally develop, indicating that HDAC6 inhibition would not cause severe side effects (19).”
BackgroundOncogenic Shp2 disturbs microtubule regulation to cause HDAC6-dependent ERK hyperactivation
Tien, S. C., & Chang, Z.-F. (2013) · Oncogene · doi:10.1038/onc.2013.241 · Cited by 29
Disruption to schizophrenia-associated gene Fez1 in the hippocampus of HDAC11 knockout mice
Bryant, D., Landles, C., Papadopoulou, A. S., Benjamin, A. C., Duckworth, J. K., Rosahl, T. W., Benn, C., & Bates, G. P. (2017) · Scientific Reports · doi:10.1038/s41598-017-11630-1 · Cited by 27
HDAC6 regulates sensitivity to cell death in response to stress and post-stress recovery
Ryu, H.-W., Won, H.-R., Lee, D. H., & Kwon, S. H. (2017) · Cell Stress and Chaperones · doi:10.1007/s12192-017-0763-3 · Cited by 32
Self-citationHistone deacetylase 6’s function in viral infection, innate immunity, and disease: latest advances
Qu, M., Zhang, H., Cheng, P., Wubshet, A. K., Yin, X., Wang, X., & Sun, Y. (2023) · Frontiers in Immunology · doi:10.3389/fimmu.2023.1216548 · Cited by 24
“HDAC6 knockout mice exhibited abnormalities in bone homeostasis and immunological function (38).”
BackgroundSignificance of Five-Membered Heterocycles in Human Histone Deacetylase Inhibitors
Frühauf, A., Behringer, M., & Meyer‐Almes, F. (2023) · Molecules · doi:10.3390/molecules28155686 · Cited by 36
“The great therapeutic window is supported by HDAC6 knock-out (KO) studies in mice, developing normally with no apparent phenotype [38].”
BackgroundPark, S., Joo, S. H., Lee, N., Jang, W., Seo, J. H., & Jeong, C. (2021) · Archives of Pharmacal Research · doi:10.1007/s12272-021-01359-x · Cited by 27
Metadata
- Authors
- Zhang, Y., Kwon, S., Yamaguchi, T., Cubizolles, F., Rousseaux, S., Kneissel, M., Cao, C., Li, N., Cheng, H.-L., Chua, K., Lombard, D., Mizeracki, A., Matthias, G., Alt, F. W., Khochbin, S., & Matthias, P.
- Affiliations
- Friedrich Miescher Institute (CH)
- Friedrich Miescher Institute for Biomedical Research, Novartis Research Foundation, P.O. Box 2543, Maulbeerstrasse 66, 4058 Basel, Switzerland
- Inserm (FR)
- Novartis (Switzerland) (CH)
- Howard Hughes Medical Institute (US)
- Corresponding author
- Matthias, Patrick
- ORCID
- Venue
- Molecular and Cellular Biology
- Publisher
- Informa UK Limited
- Published
- 2008-03-01
- Volume
- 28
- Issue
- 5
- Pages
- 1688-1701
- ISSN
- 0270-7306 (ISSN-L)
- 1098-5549
- PMC
- PMC2258784
- OpenAlex
- W2162787110
- Cited by
- 559
- References
- 0
- Citations by year
- 2026: 19 · 2025: 28 · 2024: 18 · 2023: 24 · 2022: 37 · 2021: 35 · 2020: 47 · 2019: 32 · 2018: 27 · 2017: 38 · 2016: 24 · 2015: 28 · 2014: 32 · 2013: 33 · 2012: 39
- FWCI
- 13.59
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Molecular and Cellular Biology (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Howard Hughes Medical Institute
- Ellison Medical Foundation
- Dalhousie University
- Université de Fribourg
- Institut National Du Cancer
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Histone Deacetylase Inhibitors Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Microtubule and mitosis dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Keywords
- HDAC6, tubulin acetylation, tubulin deacetylation, alpha-tubulin, HSP90 acetylation, testicular development, lymphoid development, immune response, bone mineral density, microtubule organization, embryonic fibroblasts, post-translational modification, ubiquitin binding
- MeSH terms
- Histone Deacetylase 6, Acetylation, Animals, Cells, Cultured, Crosses, Genetic, Embryo, Mammalian, Female, Fetal Viability, Fibroblasts, Histone Deacetylases, Homozygote, Immunohistochemistry, Male, Mice, Inbred C57BL, Precipitin Tests, Pregnancy, Receptors, Glucocorticoid, Recombination, Genetic, Sperm Count, Spermatogenesis, Testis, Transfection, Tubulin, Absorptiometry, Photon, Bone Density, Gene Deletion, Genes, Reporter, Mice, Knockout, HSP90 Heat-Shock Proteins, Fluorescent Antibody Technique, Indirect, NIH 3T3 Cells, Embryonic Development, Luciferases, Renilla, Mice, Embryonic Stem Cells
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