The DOI matches its Crossref record; 7 of the 7 references it cites were found in a registry or an index.
Genome assembly forensics: finding the elusive mis-assembly
Open accessAbstract
We present the first collection of tools aimed at automated genome assembly validation. This work formalizes several mechanisms for detecting mis-assemblies, and describes their implementation in our automated validation pipeline, called amosvalidate. We demonstrate the application of our pipeline in both bacterial and eukaryotic genome assemblies, and highlight several assembly errors in both draft and finished genomes. The software described is compatible with common assembly formats and is released, open-source, at http://amos.sourceforge.net.
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Cites
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Self-citationGenome sequence, comparative analysis and haplotype structure of the domestic dog
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Cited by
Mash: fast genome and metagenome distance estimation using MinHash
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Self-citationThe complete sequence of a human genome
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Self-citationLong-read sequence assembly of the gorilla genome
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Metadata
- Authors
- Phillippy, A. M., Schatz, M. C., & Pop, M.
- Venue
- Genome Biology
- Published
- 2008-03-14
- Volume
- 9
- Issue
- 3
- Pages
- R55-R55
- ISSN
- 1465-6906 (ISSN-L)
- 1474-760X
- OpenAlex
- W2114765236
- Cited by
- 272
- References
- 7
- FWCI
- 5.21
- Type
- journal article
- Language
- en
- Open access
- gold
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