The DOI matches its Crossref record; 30 of the 30 references it cites were found in a registry or an index.
Sparse permutation invariant covariance estimation
Open accessAbstract
The paper proposes a method for constructing a sparse estimator for the inverse covariance (concentration) matrix in high-dimensional settings. The estimator uses a penalized normal likelihood approach and forces sparsity by using a lasso-type penalty. We establish a rate of convergence in the Frobenius norm as both data dimension p and sample size n are allowed to grow, and show that the rate depends explicitly on how sparse the true concentration matrix is. We also show that a correlation-based version of the method exhibits better rates in the operator norm. We also derive a fast iterative algorithm for computing the estimator, which relies on the popular Cholesky decomposition of the inverse but produces a permutation-invariant estimator. The method is compared to other estimators on simulated data and on a real data example of tumor tissue classification using gene expression data.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties
Fan, J., & Li, R. (2001) · Journal of the American Statistical Association · doi:10.1198/016214501753382273 · Cited by 8,900
Sparse inverse covariance estimation with the graphical lasso
Friedman, J., Hastie, T., & Tibshirani, R. (2008) · Biostatistics · doi:10.1093/biostatistics/kxm045 · Cited by 6,355
Alon, U., Barkai, N., Notterman, D. A., Gish, K., Ybarra, S., Mack, D., & Levine, A. J. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.12.6745 · Cited by 4,167
A well-conditioned estimator for large-dimensional covariance matrices
Ledoit, O., & Wolf, M. (2004) · Journal of Multivariate Analysis · doi:10.1016/s0047-259x(03)00096-4 · Cited by 3,046
High-dimensional graphs and variable selection with the Lasso
Meinshausen, N., & Bühlmann, P. (2006) · The Annals of Statistics · doi:10.1214/009053606000000281 · Cited by 2,521
Nonlinear Programming: Theory and Algorithms
Bazaraa, M. S., Sherali, H. D., & Shetty, C. M. (2006) · Wiley eBooks · doi:10.1002/0471787779 · Cited by 2,369
On the distribution of the largest eigenvalue in principal components analysis
Johnstone, I. M. (2001) · The Annals of Statistics · doi:10.1214/aos/1009210544 · Cited by 1,949
Pathwise coordinate optimization
Friedman, J., Hastie, T., Höfling, H., & Tibshirani, R. (2007) · The Annals of Applied Statistics · doi:10.1214/07-aoas131 · Cited by 1,895
Model selection and estimation in the Gaussian graphical model
Yuan, M., & Lin, Y. (2007) · Biometrika · doi:10.1093/biomet/asm018 · Cited by 1,627
Regularized estimation of large covariance matrices
Bickel, P. J., & Levina, E. (2008) · The Annals of Statistics · doi:10.1214/009053607000000758 · Cited by 934
Self-citation
Cited by
Covariance regularization by thresholding
Bickel, P. J., & Levina, E. (2008) · The Annals of Statistics · doi:10.1214/08-aos600 · Cited by 893
Self-citationHigh-dimensional Ising model selection using ℓ1-regularized logistic regression
Ravikumar, P., Wainwright, M. J., & Lafferty, J. D. (2010) · The Annals of Statistics · doi:10.1214/09-aos691 · Cited by 892
The Joint Graphical Lasso for Inverse Covariance Estimation Across Multiple Classes
Danaher, P., Wang, P., & Witten, D. M. (2014) · Journal of the Royal Statistical Society Series B: Statistical Methodology · doi:10.1111/rssb.12033 · Cited by 855
High-dimensional covariance estimation by minimizing ℓ1-penalized log-determinant divergence
Ravikumar, P., Wainwright, M. J., Raskutti, G., & Yu, B. (2011) · Electronic Journal of Statistics · doi:10.1214/11-ejs631 · Cited by 744
Partial Correlation Estimation by Joint Sparse Regression Models
Peng, J., Wang, P., Zhou, N., & Zhu, J. (2009) · Journal of the American Statistical Association · doi:10.1198/jasa.2009.0126 · Cited by 688
Self-citationLearning Laplacian Matrix in Smooth Graph Signal Representations
Dong, X., Thanou, D., Frossard, P., & Vandergheynst, P. (2016) · IEEE Transactions on Signal Processing · doi:10.1109/tsp.2016.2602809 · Cited by 640
High-dimensional regression with noisy and missing data: Provable guarantees with nonconvexity
Loh, P.-L., & Wainwright, M. J. (2012) · The Annals of Statistics · doi:10.1214/12-aos1018 · Cited by 529
Estimation of (near) low-rank matrices with noise and high-dimensional scaling
Negahban, S., & Wainwright, M. J. (2011) · The Annals of Statistics · doi:10.1214/10-aos850 · Cited by 537
High-dimensional semiparametric Gaussian copula graphical models
Liu, H., Han, F., Yuan, M., Lafferty, J., & Wasserman, L. (2012) · The Annals of Statistics · doi:10.1214/12-aos1037 · Cited by 507
Generalized Thresholding of Large Covariance Matrices
Rothman, A. J., Levina, E., & Zhu, J. (2009) · Journal of the American Statistical Association · doi:10.1198/jasa.2009.0101 · Cited by 489
Self-citationLatent variable graphical model selection via convex optimization
Chandrasekaran, V., Parrilo, P. A., & Willsky, A. S. (2012) · The Annals of Statistics · doi:10.1214/11-aos949 · Cited by 377
Sparse estimation of a covariance matrix
Bien, J., & Tibshirani, R. J. (2011) · Biometrika · doi:10.1093/biomet/asr054 · Cited by 342
A Unified Framework for High-Dimensional Analysis of $M$-Estimators with Decomposable Regularizers
Negahban, S. N., Ravikumar, P., Wainwright, M. J., & Yu, B. (2012) · Statistical Science · doi:10.1214/12-sts400 · Cited by 287
The graphical lasso: New insights and alternatives
Mazumder, R., & Hastie, T. (2012) · Electronic Journal of Statistics · doi:10.1214/12-ejs740 · Cited by 267
DINGO: differential network analysis in genomics
Ha, M. J., Baladandayuthapani, V., & Do, K.-A. (2015) · Bioinformatics · doi:10.1093/bioinformatics/btv406 · Cited by 120
Robust and sparse correlation matrix estimation for the analysis of high-dimensional genomics data
Serra, A., Coretto, P., Fratello, M., & Tagliaferri, R. (2018) · Bioinformatics · doi:10.1093/bioinformatics/btx642 · Cited by 25
Metadata
- Authors
- Rothman, A. J., Bickel, P. J., Levina, E., & Zhu, J.
- Venue
- Electronic Journal of Statistics
- Publisher
- Institute of Mathematical Statistics
- Published
- 2008-01-01
- Volume
- 2
- Issue
- none
- Pages
- 494-515
- ISSN
- 1935-7524 (ISSN-L)
- OpenAlex
- W1974105260
- Cited by
- 560
- References
- 30
- FWCI
- 16.14
- Type
- journal article
- Language
- en
- Open access
- gold
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.