A Large Fraction of Extragenic RNA Pol II Transcription Sites Overlap Enhancers

De Santa, Francesca, Barozzi, Iros, Mietton, Flore, Ghisletti, Serena, Polletti, Sara, Tusi, Betsabeh Khoramian, Muller, Heiko, Ragoussis, Jiannis +2 more·2010·PLoS Biology

DOI 10.1371/journal.pbio.1000384

Cited by (934)

Items 301–400 of 934

Lingering Questions about Enhancer RNA and Enhancer Transcription-Coupled Genomic Instability
Gerson Rothschild, Uttiya Basu · 2017 · Trends in Genetics
Enhancers Facilitate the Birth of De Novo Genes and Gene Integration into Regulatory Networks
Paco Majic, Joshua L. Payne · 2019 · Molecular Biology and Evolution
Transcription factor binding at enhancers: shaping a genomic regulatory landscape in flux
Robert-Jan T. S. Palstra, Frank G. Grosveld · 2012 · Frontiers in Genetics
Epigenomic control of the innate immune response
Joshua D. Stender, Christopher K. Glass · 2013 · Current Opinion in Pharmacology
TT‐seq captures enhancer landscapes immediately after T‐cell stimulation
Margaux Michel, Carina Demel, Benedikt Zacher, Björn Schwalb, Stefan Krebs, Helmut Blum, Julien Gagneur, Patrick Cramer · 2017 · Molecular Systems Biology
Epigenetic mechanisms influencing COVID-19
Rwik Sen, Michael R. Garbati, Kevin F. Bryant, Yanan Lu · 2021 · Genome
A Conserved Noncoding Sequence Can Function as a Spermatocyte-Specific Enhancer and a Bidirectional Promoter for a Ubiquitously Expressed Gene and a Testis-Specific Long Noncoding RNA
Misuzu Kurihara, Akira Shiraishi, Honoo Satake, Atsushi P. Kimura · 2014 · Journal of Molecular Biology
Expression and regulation of long noncoding RNAs in TLR4 signaling in mouse macrophages
Aiping Mao, Jun Shen, Zhixiang Zuo · 2015 · BMC Genomics
Long ncRNA A-ROD activates its target gene DKK1 at its release from chromatin
Evgenia Ntini, Annita Louloupi, Julia Liz, José M. Muiño, Annalisa Marsico, Ulf Andersson Ørom · 2018 · Nature Communications
Functional insights into the role of nuclear-retained long noncoding RNAs in gene expression control in mammalian cells
Deepak Kumar Singh, Kannanganattu V. Prasanth · 2013 · Chromosome Research
Distinct gene regulatory programs define the inhibitory effects of liver X receptors and PPARG on cancer cell proliferation
Daniel Savic, Ryne C. Ramaker, Brian S. Roberts, Emma C. Dean, Todd C. Burwell, Sarah Kristen Meadows, Sara J. Cooper, Michael J. Garabedian, Jason Gertz, R Myers · 2016 · Genome Medicine
LETR1 is a lymphatic endothelial-specific lncRNA governing cell proliferation and migration through KLF4 and SEMA3C
Luca Ducoli, Saumya Agrawal, Eliane Sibler, Tsukasa Kouno, Carlotta Tacconi, Chung-Chau Hon, Simone D. Berger, Daniela Müllhaupt, Yuliang He, Jihye Kim et al. · 2021 · Nature Communications
Long Non-Coding RNAs in Haematological Malignancies
Andoni Garitano-Trojaola, Xabier Agirre, Felipe Prósper, Puri Fortes · 2013 · International Journal of Molecular Sciences
Fixing the model for transcription
Argyris Papantonis, Peter R. Cook · 2011 · Transcription
Landscapes and archipelagos: spatial organization of gene regulation in vertebrates
Thomas Montavon, Denis Duboule · 2012 · Trends in Cell Biology
Genome-Wide Identification and Characterization of Long Intergenic Non-Coding RNAs in Ganoderma lucidum
Jianqin Li, Bin Wu, Jiang Xu, Chang Liu · 2014 · PLoS ONE
Initiating RNA Polymerase II and TIPs as hallmarks of enhancer activity and tissue-specificity
Frédéric Koch, Jean‐Christophe Andrau · 2011 · Transcription
Towards an understanding of cell-specific functions of signal-dependent transcription factors
Dawn X. Zhang, Christopher K. Glass · 2013 · Journal of Molecular Endocrinology
Diverse regulatory interactions of long noncoding RNAs
Tae-Kyung Kim, Ramin Shiekhattar · 2016 · Current Opinion in Genetics & Development
Long noncoding RNAs: new insights in modulating mammalian spermatogenesis
Bahlibi Weldegebriall Sahlu, Shanjiang Zhao, Xiuge Wang, Saqib Umer, Huiying Zou, Jinming Huang, Huabin Zhu · 2020 · Journal of Animal Science and Biotechnology/Journal of animal science and biotechnology
Transcriptionally active enhancers in human cancer cells
Katja Lidschreiber, Lisa Anna Jung, Henrik von der Emde, Kashyap Dave, Jussi Taipale, Patrick Cramer, Michael Lidschreiber · 2021 · Molecular Systems Biology
MYC activity at enhancers drives prognostic transcriptional programs through an epigenetic switch
Simon T. Jakobsen, Rikke A. M. Jensen, Maria S. Madsen, Tina Ravnsborg, Christian Vaagensø, Majken Storm Siersbæk, Hjörleifur Einarsson, Robin Andersson, Ole Nørregaard Jensen, Rasmus Siersbæk · 2024 · Nature Genetics
Gene activation by metazoan enhancers: Diverse mechanisms stimulate distinct steps of transcription
Robert A. Beagrie, Ana Pombo · 2016 · BioEssays
Biotagging of Specific Cell Populations in Zebrafish Reveals Gene Regulatory Logic Encoded in the Nuclear Transcriptome
Le A. Trinh, Vanessa Chong-Morrison, Daria Gavriouchkina, Tatiana Hochgreb, Upeka Senanayake, Scott E. Fraser, Tatjana Sauka‐Spengler · 2017 · Cell Reports
Versatile interactions and bioinformatics analysis of noncoding RNAs
Qi Chen, Xianwen Meng, Qi Liao, Ming Chen · 2018 · Briefings in Bioinformatics
Distal CpG islands can serve as alternative promoters to transcribe genes with silenced proximal promoters
Sarda, Shrutii, Das, Avinash, Vinson, Charles, Hannenhalli, Sridhar · 2017 · Genome Research
Cohesin couples transcriptional bursting probabilities of inducible enhancers and promoters
Irene Robles-Rebollo, Sergi Cuartero, Adrià Cañellas-Socias, Sarah Wells, Mohammad Mahdi Karimi, Elisabetta Mereu, Alexandra G. Chivu, Holger Heyn, Chad Whilding, Dirk Dormann et al. · 2022 · Nature Communications
Non-coding RNAs in immunoregulation and autoimmunity: Technological advances and critical limitations
Dhaneshwar Kumar, Subhransu S. Sahoo, Daniel Chauss, Majid Kazemian, Behdad Afzali · 2022 · Journal of Autoimmunity
Enhancer RNAs: a missing regulatory layer in gene transcription
Renfang Mao, Yuanyuan Wu, Yue Ming, Yuanpei Xu, Shouyan Wang, Xia Chen, Xiaoying Wang, Yihui Fan · 2018 · Science China Life Sciences
A rare variant of African ancestry activates 8q24 lncRNA hub by modulating cancer associated enhancer
Kaivalya Walavalkar, Bharath Saravanan, Anurag Kumar Singh, Ranveer Singh Jayani, Ashwin Nair, Umer Farooq, Zubairul Islam, Deepanshu Soota, Rajat Mann, Padubidri V. Shivaprasad et al. · 2020 · Nature Communications
Nascent RNA sequencing reveals a dynamic global transcriptional response at genes and enhancers to the natural medicinal compound celastrol
Noah Dukler, Gregory T. Booth, Yi-Fei Huang, Nathaniel D. Tippens, Colin T. Waters, Charles G. Danko, John T. Lis, Adam C. Siepel · 2017 · Genome Research
Long Non-Coding RNAs Differentially Expressed between Normal versus Primary Breast Tumor Tissues Disclose Converse Changes to Breast Cancer-Related Protein-Coding Genes
Kristin Reiche, Katharina Kasack, S Schreiber, Torben Lüders, Eldri Undlien Due, Bjørn Naume, Margit L. H. Riis, Vessela N. Kristensen, Friedemann Horn, Anne‐Lise Børresen‐Dale et al. · 2014 · PLoS ONE
Understanding cardiovascular disease: a journey through the genome (and what we found there)
Enrique Lara‐Pezzi, Ana Dopazo, Miguel Manzanares · 2012 · Disease Models & Mechanisms
Genome-wide analysis of H3.3 dissociation reveals high nucleosome turnover at distal regulatory regions of embryonic stem cells
Misook Ha, Daniel C. Kraushaar, Keji Zhao · 2014 · Epigenetics & Chromatin
Genome-wide Identification and Characterization of Enhancers Across 10 Human Tissues
Lili Xiong, Ran Kang, Ruofan Ding, Wenyuan Kang, Yiming Zhang, Wenrong Liu, Qingqing Huang, Junhua Meng, Zhiyun Guo · 2018 · International Journal of Biological Sciences
Phase Separation and Transcription Regulation: Are Super-Enhancers and Locus Control Regions Primary Sites of Transcription Complex Assembly?
Gurumurthy, Aishwarya, Shen, Yong, Gunn, Eliot M., Bungert, Jörg · 2019 · BioEssays
Computational Biology Solutions to Identify Enhancers-target Gene Pairs
Judith Mary Hariprakash, Francesco Ferrari · 2019 · Computational and Structural Biotechnology Journal
The Chromatin Remodeler CHD8 Is Required for Activation of Progesterone Receptor-Dependent Enhancers
María Ceballos-Chávez, Alicia Subtil‐Rodríguez, Ευγενία Γιαννοπούλου, Daniel Soronellas, Elena Vázquez-Chávez, Guillermo Pablo Vicent, Olivier Elemento, Miguel Beato, José C. Reyes · 2015 · PLoS Genetics
Alternate Roles of Sox Transcription Factors beyond Transcription Initiation
Yuli Zhang, Linlin Hou · 2021 · International Journal of Molecular Sciences
A lncRNA Perspective into (Re)Building the Heart
Stefan Frank, Aitor Aguirre, Juergen Hescheler, Leo Kurian · 2016 · Frontiers in Cell and Developmental Biology
Non-coding RNAs underlie genetic predisposition to breast cancer
Mahdi Moradi Marjaneh, Jonathan Beesley, Tracy A. O’Mara, Pamela Mukhopadhyay, Lambros T. Koufariotis, Stephen H. Kazakoff, Nehal Hussein, Laura Fachal, Nenad Bartoniček, Kristine M. Hillman et al. · 2020 · Genome biology
G9a Promotes Breast Cancer Recurrence through Repression of a Pro-inflammatory Program
Nathaniel W. Mabe, Nina Marie G. Garcia, Shayna E. Wolery, Rachel Newcomb, Ryan C. Meingasner, Brittany A. Vilona, Ryan Lupo, Chao‐Chieh Lin, Jen‐Tsan Chi, James V. Alvarez · 2020 · Cell Reports
Genomic and functional conservation of lncRNAs: lessons from flies
Carlos Camilleri‐Robles, Raziel Amador, Cecília C. Klein, Roderic Guigó, Montserrat Corominas, Marina Ruiz‐Romero · 2022 · Mammalian Genome
Enhancer RNAs step forward: new insights into enhancer function
Laura J. Harrison, Daniel A. Bose · 2022 · Development
Transcription factories, chromatin loops, and the dysregulation of gene expression in malignancy
Binwei Deng, Svitlana Melnik, Peter R. Cook · 2012 · Seminars in Cancer Biology
Where long noncoding RNAs meet DNA methylation
Fan Lai, Ramin Shiekhattar · 2014 · Cell Research
Effects of supercoiling on enhancer–promoter contacts
Fabrizio Benedetti, Julien Dorier, Andrzej Stasiak · 2014 · Nucleic Acids Research
RNA-Seq defines novel genes, RNA processing patterns and enhancer maps for the early stages of nephrogenesis: Hox supergenes
Eric W. Brunskill, S. Steven Potter · 2012 · Developmental Biology
Integrated genome analysis suggests that most conserved non-coding sequences are regulatory factor binding sites
Martin Hemberg, Jesse M. Gray, Nicole Cloonan, Scott Kuersten, Sean Michael Grimmond, Michael E. Greenberg, Gabriel Kreiman · 2012 · Nucleic Acids Research
Chromatin remodeling effects on enhancer activity
Estela G. García-González, Martín Escamilla-Del-Arenal, Rodrigo G. Arzate‐Mejía, Félix Recillas Targa · 2016 · Cellular and Molecular Life Sciences
Enhancer-associated RNAs as therapeutic targets
Nicolas Léveillé, Carlos A. Melo, Reuven Agami · 2015 · Expert Opinion on Biological Therapy
The molecular pathogenesis of the NUP98-HOXA9 fusion protein in acute myeloid leukemia
Ana Rio‐Machín, Gonzalo Goméz-López, Javier Muñoz, Fernando Garcı́a, Alba Maiqués-Díaz, Sara Álvarez, Rocío Salgado, Mahesh Shrestha, Raúl Torres-Ruiz, Claudia Haferlach et al. · 2017 · Leukemia
Hotspots of Aberrant Enhancer Activity in Fibrolamellar Carcinoma Reveal Candidate Oncogenic Pathways and Therapeutic Vulnerabilities
Timothy A. Dinh, Ramja Sritharan, F. Donelson Smith, Adam B. Francisco, Rosanna K. Ma, Rodica Petruta Bunaciu, Matt Kanke, Charles G. Danko, Andrew P. Massa, John D. Scott et al. · 2020 · Cell Reports
Oct4 differentially regulates chromatin opening and enhancer transcription in pluripotent stem cells
Le Xiong, Erik A Tolen, Jinmi Choi, Sergiy Velychko, Livia Caizzi, Taras Velychko, Kenjiro Adachi, Caitlin M. MacCarthy, Michael Lidschreiber, Patrick Cramer et al. · 2022 · eLife
Global analysis of transcription in castration-resistant prostate cancer cells uncovers active enhancers and direct androgen receptor targets
Sari Toropainen, Einari A. Niskanen, Marjo Malinen, Päivi Sutinen, Minna Unelma Kaikkonen, Jorma J. Palvimo · 2016 · Scientific Reports
Splicing of enhancer-associated lincRNAs contributes to enhancer activity
Jennifer Y. Tan, Adriano Biasini, Robert S. Young, Ana Claudia Marques · 2020 · Life Science Alliance
Emerging themes in neuronal activity-dependent gene expression
Ram Madabhushi, Tae-Kyung Kim · 2017 · Molecular and Cellular Neuroscience
Discovering Transcriptional Regulatory Elements From Run‐On and Sequencing Data Using the Web‐Based dREG Gateway
Tinyi Chu, Zhong Wang, Shao‐Pei Chou, Charles G. Danko · 2018 · Current Protocols in Bioinformatics
The mechanism and function of super enhancer RNA
Shibai Xiao, Qin Huang, Hao Ren, Min Yang · 2021 · genesis
Enhancer RNA promotes resistance to radiotherapy in bone-metastatic prostate cancer by m 6 A modification
Yu Zhao, Simeng Wen, Hang Li, Chun-Wu Pan, Yulei Wei, Ting Huang, Zhaochen Li, Yinhui Yang, Saijun Fan, Yingyi Zhang · 2023 · Theranostics
Simple and efficient profiling of transcription initiation and transcript levels with STRIPE-seq
Robert A. Policastro, R. Taylor Raborn, Volker Brendel, Gabriel E. Zentner · 2020 · Genome Research
Enhancer RNAs in transcriptional regulation: recent insights
Qi Chen, Yaxin Zeng, Jinjin Kang, Minghui Hu, Nianle Li, Kun Sun, Yu Fen Zhao · 2023 · Frontiers in Cell and Developmental Biology
Revisiting 3D chromatin architecture in cancer development and progression
Yuliang Feng, Siim Pauklin · 2020 · Nucleic Acids Research
Analysis of estrogen-regulated enhancer RNAs identifies a functional motif required for enhancer assembly and gene expression
Tim Y. Hou, W. Lee Kraus · 2022 · Cell Reports
Exploiting genomics and natural genetic variation to decode macrophage enhancers
Casey E. Romanoski, Verena M. Link, Sven Heinz, Christopher K. Glass · 2015 · Trends in Immunology
Uncovering Enhancer Functions Using the α-Globin Locus
Douglas Vernimmen · 2014 · PLoS Genetics
The origins of developmental gene regulation
César Arenas‐Mena · 2017 · Evolution & Development
Steering Against Wind: A New Network of NamiRNAs and Enhancers
Ying Jie Liang, Qingping Zou, Wenqiang Yu · 2017 · Genomics Proteomics & Bioinformatics
The PAF1 complex promotes 3′ processing of pervasive transcripts
Xinhong Liu, Ziwei Guo, Jing Han, Bo Peng, Bin Zhang, Haitao Li, Xiaoyu Hu, Charles J. David, Mo Chen · 2022 · Cell Reports
RNA-directed DNA methylation in plants
Heng Zhang, Xin‐Jian He, Jian‐Kang Zhu · 2013 · RNA Biology
Progress and prospects of noncoding RNAs in insects
Meizhen Li, Huamei Xiao, Kang He, Fei Li · 2019 · Journal of Integrative Agriculture
Transcription through enhancers suppresses their activity in Drosophila
Maksim Erokhin, Anna Davydova, Alexander Parshikov, Vasily M. Studitsky, Pavel G Georgiev, Darya Chetverina · 2013 · Epigenetics & Chromatin
Genomic Views of Transcriptional Enhancers: Essential Determinants of Cellular Identity and Activity-Dependent Responses in the CNS
Jesse M. Gray, Tae-Kyung Kim, Anne E. West, Alex S. Nord, Eirene Markenscoff-Papadimitriou, Stavros Lomvardas · 2015 · Journal of Neuroscience
The epigenetic architecture at gene promoters determines cell type-specific LPS tolerance
Kerstin Klein, Mojca Frank‐Bertoncelj, Emmanuel Karouzakis, Renate E. Gay, Christoph Kolling, Adrian Ciurea, Nagihan Bostancı, Georgios N. Belibasakis, Lih‐Ling Lin, Oliver Distler et al. · 2017 · Journal of Autoimmunity
Cross-species inference of long non-coding RNAs greatly expands the ruminant transcriptome
Stephen J. Bush, Charity Muriuki, Mary E. B. McCulloch, Iseabail Farquhar, Emily L. Clark, David Arthur Hume · 2018 · Genetics Selection Evolution
CRlncRC: a machine learning-based method for cancer-related long noncoding RNA identification using integrated features
Xuan Zhang, Jun Wang, Jing Li, Wen Chen, Changning Liu · 2018 · BMC Medical Genomics
Inhibition of the Hypoxia-Inducible Factor 1α–Induced Cardiospecific HERNA1 Enhance-Templated RNA Protects From Heart Disease
Peter Mirtschink, Corinne Bischof, Minh Duc Pham, Rahul Sharma, Sanjay P. Khadayate, Geetha Rossi, Niklaus Fankhauser, Shuyang Traub, Samuel Tobias Sossalla, Eman Hagag et al. · 2019 · Circulation
Super-enhancer lncs to cardiovascular development and disease
Samir Ounzain, Thierry Pedrazzini · 2015 · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
Transcriptional and Posttranscriptional Programming by Long Noncoding RNAs
Radha Raman Pandey, Chandrasekhar Kanduri · 2010 · Progress in molecular and subcellular biology
Transcriptional regulation of the Ikzf1 locus
Toshimi Yoshida, Esther Wei-Yun Landhuis, Marei Dose, Idit Hazan, Jiangwen Zhang, Taku Naito, Audrey F. Jackson, Jeffrey H. Wu, Elizabeth A. Perotti, Christoph Kaufmann et al. · 2013 · Blood
Transcription of Inflammatory Genes: Long Noncoding RNA and Beyond
Susan B Carpenter, Katherine A. Fitzgerald · 2014 · Journal of Interferon & Cytokine Research
Preparing the First Responders: Building the Inflammatory Transcriptome from the Ground Up
Inez Rogatsky, Karen Adelman · 2014 · Molecular Cell
Transcriptional role of androgen receptor in the expression of long non-coding RNA Sox2OT in neurogenesis
Valentina Tosetti, Jenny Sassone, Luca Ferri, Michela Maria Taiana, Gloria Bedini, Sara Nava, Greta Brenna, Chiara Di Resta, Davide Pareyson, Anna Maria Di Giulio et al. · 2017 · PLoS ONE
Chromatin proteomics reveals novel combinatorial histone modification signatures that mark distinct subpopulations of macrophage enhancers
Monica Soldi, Tommaso Mari, Luciano Nicosia, Daniele Musiani, Gianluca Sigismondo, Alessandro Cuomo, Giulio Pavesi, Tiziana Bonaldi · 2017 · Nucleic Acids Research
Looping of upstream cis-regulatory elements is required for CFTR expression in human airway epithelial cells
Monali NandyMazumdar, Shiyi Yin, Alekh Paranjapye, Jenny L. Kerschner, Hannah Swahn, Alex Yang Ge, Shih‐Hsing Leir, Ann Harris · 2020 · Nucleic Acids Research
High throughput technologies for the functional discovery of mammalian enhancers: New approaches for understanding transcriptional regulatory network dynamics
Lisa Dailey · 2015 · Genomics
Histone Deacetylase Inhibitors Repress Tumoral Expression of the Proinvasive Factor RUNX2
Valentina Sancisi, Greta Gandolfi, Davide Carlo Ambrosetti, Alessia Ciarrocchi · 2015 · Cancer Research
Promoter-distal RNA polymerase II binding discriminates active from inactive CCAAT/ enhancer-binding protein beta binding sites
Daniel Savic, Brian S. Roberts, Julia B. Carleton, E. Christopher Partridge, Michael A. White, Barak A. Cohen, Gregory M. Cooper, Jason Gertz, R Myers · 2015 · Genome Research
Enhancer RNA (eRNA) in Human Diseases
Yunzhe Wang, Chenyang Zhang, Yuxiang Wang, Xiuping Liu, Zhao Zhang · 2022 · International Journal of Molecular Sciences
Enhancers
Fulai Jin, Yan Li, Bing Ren, Rama D Natarajan · 2011 · Transcription
Transcriptional control of macrophage diversity and specialization
Renato Ostuni, Gioacchino Natoli · 2011 · European Journal of Immunology
A long non-coding RNA promotes full activation of adult gene expression in the chicken α-globin domain
Cristian Arriaga-Canon, Yael Fonseca-Guzmán, Christian Valdes‐Quezada, Rodrigo G. Arzate‐Mejía, Georgina Guerrero, Félix Recillas Targa · 2013 · Epigenetics
Widespread enhancer activation via ERα mediates estrogen response in vivo during uterine development
Wendy N. Jefferson, Harriet Karimi Kinyamu, Tianyuan Wang, Adam X. Miranda, Elizabeth Padilla‐Banks, Alisa A. Suen, Carmen J. Williams · 2018 · Nucleic Acids Research
Nuclear RNA Sequencing of the Mouse Erythroid Cell Transcriptome
Jennifer A. Mitchell, Ieuan Clay, David Umlauf, Chih‐Yu Chen, Catherine A. Moir, Christopher H. Eskiw, Stefan Schoenfelder, Lyubomira Chakalova, Takashi Nagano, Peter Fraser · 2012 · PLoS ONE
Allele-specific distribution of RNA polymerase II on female X chromosomes
Katerina S. Kucera, Timothy E. Reddy, Florencia Pauli, Jason Gertz, Jenae E. Logan, R Myers, Huntington F. Willard · 2011 · Human Molecular Genetics
KDM1A maintains genome-wide homeostasis of transcriptional enhancers
Saurabh Agarwal, Katherine M. Bonefas, Patricia Marie Garay, Emily Brookes, Yumie Murata-Nakamura, Robert S. Porter, Todd S. Macfarlan, Bing Ren, Shigeki Iwase · 2021 · Genome Research
Dissecting the cis-regulatory syntax of transcription initiation with deep learning
Kelly Cochran, Melody Yin, Anika Mantripragada, Jacob Matthew Schreiber, Georgi K. Marinov, Sagar R Shah, Haiyuan Yu, John T. Lis, Anshul Bharat Kundaje · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
Mapping genome-wide transcription factor binding sites in frozen tissues
Savic, Daniel, Gertz, Jason, Jain, Preti, Cooper, Gregory M, Myers, Richard M · 2013 · Epigenetics & Chromatin
Genome-wide identification of novel intergenic enhancer-like elements: implications in the regulation of transcription in Plasmodium falciparum
Suyog Ubhe, Mukul Rawat, Srikant Prasad Verma, Krishanpal Anamika, Krishanpal Karmodiya · 2017 · BMC Genomics
Chromatin states reveal functional associations for globally defined transcription start sites in four human cell lines
Morten Beck Rye, Geir Kjetil Sandve, Carsten O. Daub, Hideya Kawaji, Piero Carninci, Alistair R. R. Forrest, Finn Drabløs · 2014 · BMC Genomics