The DOI matches its Crossref record; 6 of the 6 references it cites were found in a registry or an index.
Comparative Protein Structure Modeling: Introduction and Practical Examples with Modeller
Abstract
A useful three-dimensional (3D) model for a protein of unknown structure (the target) can frequently be built based on one or more related proteins of known structure (the templates). This is the aim of comparative or homology protein structure modeling. The necessary conditions are that the similarity between the target sequence and the template structures is detectable and that the correct alignment between them can be constructed. For reviews of comparative modeling, see refs. , , , , . This approach to structure prediction is possible because a small change in the protein sequence usually results in a small change in its 3D structure (,).
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Cites
PROCHECK: a program to check the stereochemical quality of protein structures
Laskowski, R. A., MacArthur, M. W., Moss, D. S., & Thornton, J. M. (1993) · Journal of Applied Crystallography · doi:10.1107/s0021889892009944 · Cited by 24,581
Needleman, S. B., & Wunsch, C. D. (1970) · Journal of Molecular Biology · doi:10.1016/0022-2836(70)90057-4 · Cited by 11,288
Comparative Protein Structure Modeling of Genes and Genomes
Martí-Renom, M. A., Stuart, A. C., Fiser, A., Sánchez, R., Melo, F., & Šali, A. (2000) · Annual Review of Biophysics and Biomolecular Structure · doi:10.1146/annurev.biophys.29.1.291 · Cited by 3,169
Self-citationThe relation between the divergence of sequence and structure in proteins.
Chothia, C., & Lesk, A. M. (1986) · The EMBO Journal · doi:10.1002/j.1460-2075.1986.tb04288.x · Cited by 2,458
A new approach to protein fold recognition
Jones, D. T., Taylort, W. R., & Thornton, J. M. (1992) · Nature · doi:10.1038/358086a0 · Cited by 1,221
Topology fingerprint approach to the inverse protein folding problem
Godzik, A., Kolinski, A., & Skolnick, J. (1992) · Journal of Molecular Biology · doi:10.1016/0022-2836(92)90693-e · Cited by 339
Cited by
Sapsford, K. E., Tyner, K. M., Dair, B. J., Deschamps, J. R., & Medintz, I. L. (2011) · Analytical Chemistry · doi:10.1021/ac200853a · Cited by 538
Buchert, R., Tawamie, H., Smith, C., Uebe, S., Innes, A. M., Al Hallak, B., Ekici, A. B., Sticht, H., Schwarze, B., Lamont, R. E., et al. (2014) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2014.10.003 · Cited by 132
Structure-phenotype correlations of human CYP21A2 mutations in congenital adrenal hyperplasia
Haider, S., Islam, B., D’Atri, V., Sgobba, M., Poojari, C., Sun, L., Yuen, T., Zaidi, M., & New, M. I. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1221133110 · Cited by 127
Tuszynski, J. A., Carpenter, E. J., Huzil, J. T., Malinski, W., Luchko, T., & Luduena, R. F. (2006) · The International Journal of Developmental Biology · doi:10.1387/ijdb.052063jt · Cited by 83
Homology modeling of tubulin: Influence predictions for microtubule’s biophysical properties
Carpenter, E. J., Huzil, J. T., Ludueña, R. F., & Tuszynski, J. A. (2006) · European Biophysics Journal · doi:10.1007/s00249-006-0088-0 · Cited by 23
Metadata
- Authors
- Sánchez, R., & Šali, A.
- Venue
- Protein Structure Prediction
- Publisher
- Humana Press
- Published
- 2003-11-14
- Volume
- 143
- Pages
- 97-129
- OpenAlex
- W2419588362
- Cited by
- 236
- References
- 6
- FWCI
- 14.54
- Type
- book chapter
- Language
- en
- Open access
- closed
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