Cited by 6Alzheimer's disease research and treatmentsNeuroscience and Neuropharmacology ResearchNeuroinflammation and Neurodegeneration Mechanisms

Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

Open access
Basak, Jacob M., Kim, Jungsu·2010·The Journal of Neuroscience

Abstract

The ε4 allele of apolipoprotein E (APOE) is the strongest genetic risk factor for the development of Alzheimer's disease (AD). Accumulation of amyloid-β (Aβ) is hypothesized to initiate synaptic and neuronal dysfunction that ultimately lead to neuronal cell death in AD, and several lines of

AI snapshot

Written from the paper’s full text.

TL;DR

This review/commentary discusses Dumanis et al. (2009), which reported that APOE4-targeted replacement mice have fewer cortical dendritic spines than APOE2 or APOE3 mice, with isoform-dependent spine length differences. It argues that in vivo spine dynamics, spine subtype identity, and apoE protein levels remain unresolved and require further study.

Key findings

  • In Dumanis et al. (2009), APOE4 mice had significantly fewer dendritic spines in layer II/III cortical pyramidal neurons than APOE2 or APOE3 mice at all ages examined; no cortical spine density difference was observed between APOE2 and APOE3 mice.
  • Spine length differed by isoform: at 1 month of age, APOE2 mice had longer cortical spines than APOE3 and APOE4 mice; in the 1-year-old cohort, APOE4 mice had shorter spines than APOE2 and APOE3 mice.
  • No differences in hippocampal spine density were found among mice expressing different human APOE isoforms; the presence of any human apoE isoform increased spine number at 3 months of age compared with mice lacking apoE.
  • The review notes that whether apoE4 represents a gain of toxic function or loss of neuroprotective function remains debated; the spine data lend some support to the latter, but APOE-null mice were not included in the 1-year-old cohort.

Methods

  • Design: review/commentary evaluating Dumanis et al. (2009); no new primary data are presented.
  • Data/sample: Dumanis et al. used Golgi impregnation in mice in which human APOE2, APOE3, or APOE4 was substituted into the mouse APOE locus, plus apoE-null mice, across multiple ages and brain regions.
  • Main analysis: narrative synthesis of reported dendritic spine density and morphology findings; no meta-analysis or new statistical analysis is described.

Limitations

  • Stated in the review: the Golgi technique quantified spine number at a single time point, so it cannot distinguish decreased spine formation from increased elimination; the analysis did not distinguish spine subtypes; APOE-null mice were not included in the 1-year-old cohort; different apoE protein levels among isoforms could account for the findings; and functional synaptic activity was not analyzed.
  • Evident from the text: this is a review/commentary rather than a primary experimental test, and conclusions about human brain relevance and AD pathogenesis remain speculative; the review calls for two-photon imaging and APOE-isoform mice expressing human Aβ to test whether effects persist during AD pathogenesis.

Model-written summary. Check it against the paper before relying on it.

Integrity signals

Registry

Crossref · 10.1523/jneurosci.0505-10.2010

Cites

9 of 9 references verified0 citation errors · 0 not checkable

Statistics

Nothing to recompute.

Claims the paper makes

13 of 19 cited sources checked · 12 supported · 0 flagged · accuracy not yet measured

  • Premisenone given
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    The study by Dumanis et al. (2009) is the first to systematically compare dendritic spines in vivo in mice in which the human APOE2, APOE3, or APOE4 gene has been substituted into the mouse APOE locus.

    “The study by Dumanis et al. (2009) is the first to systematically compare dendritic spines in vivo in mice in which the human APOE2, APOE3, or APOE4 gene has been substituted into the mouse APOE locus.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites Dumanis et al. (2009) source
  • Premisecitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    Several lines of evidence strongly suggest that the differential effects of apoE isoforms on Aβ aggregation and/or clearance plays a major role in AD pathogenesis.

    “several lines of evidence strongly suggest that the differential effects of apoE isoforms on A␤ aggregation and/or clearance plays a major role in AD pathogenesis (Kim et al., 2009).”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites Kim et al., 2009 source
    • Rests on an assumption: The ε4 allele of apolipoprotein E (APOE) is the strongest genetic risk factor for the development of Alzheimer's disease (AD).
  • Premisecitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    No differences in cortical spine density between APOE2 and APOE3 mice were observed.

    “No differences in cortical spine density between APOE2 and APOE3 mice were observed [Dumanis et al. (2009), their Fig. 1, Fig. 3].”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites Dumanis et al. (2009) source
  • Premisecitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    Spine length differed between mice expressing different APOE isoforms.

    “Dumanis et al. (2009) also found that spine length differed between mice expressing different APOE isoforms.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites Dumanis et al. (2009) source
  • Premisecitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    At all ages examined, mice expressing APOE4 had significantly fewer dendritic spines in layer II/III cortical pyramidal neurons than mice expressing APOE2 or APOE3.

    “One of the principal findings was that, at all ages examined, mice expressing APOE4 had significantly fewer dendritic spines in layer II/III cortical pyramidal neurons than mice expressing APOE2 or APOE3 [Dumanis et al. (2009), their Fig. 1, Fig. 3].”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites Dumanis et al. (2009) source
  • Classified as probably not a substantial claim. 13
  • May combine two claims. 6
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    Both formation and elimination of spine are associated with learning and could play a role in memory formation.

    “However, more recent two-photon studies demonstrated that both formation and elimination of spine are associated with learning and could play a role in memory formation (Xu et al., 2009;Yang et al., 2009).”
    Quote in the paperNot a substantial claim1 of 2 sources checked
    • cites Xu et al., 2009

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

    • cites Yang et al., 2009 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    The effect of apoE isoforms on dendrite structure and function has been extensively investigated in vitro with widely differing results depending on a variety of factors.

    “The effect of apoE isoforms on dendrite structure and function has been extensively investigated in vitro with widely differing results depending on a variety of factors (Kim et al., 2009).”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites Kim et al., 2009 source
  • May combine two claims.

    Premisecitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    The amount of apoE protein in the brain differs among mice expressing different human isoforms, with the highest levels in APOE2 mice and the lowest in APOE4 mice.

    “Several studies have shown that the amount of apoE protein in the brain differs among mice expressing different human isoforms, with the highest levels in APOE2 mice and the lowest in APOE4 mice (Kim et al., 2009).”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites Kim et al., 2009 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Interpretationcitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    Synapse connectivity during experience-dependent processes could predominantly be shaped by the extent of spine loss.

    “This finding suggests that synapse connectivity during experience-dependent processes could predominantly be shaped by the extent of spine loss.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Interpretationcitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    It is possible that the decreased spine density in older APOE4 mice results from increased spine elimination.

    “Because the addition of a new stable spine is a rare event in adult mice (Alvarez and Sabatini, 2007), it is possible that the decreased spine density in older APOE4 mice results from increased spine elimination.”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Alvarez and Sabatini, 2007 source
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    Long-term sensory deprivation dramatically reduced spine elimination, but had no effect on spine formation.

    “The authors found that long-term sensory deprivation dramatically reduced spine elimination, but had no effect on spine formation.”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Zuo et al., 2005 source
  • Classified as probably not a substantial claim. May combine two claims.

    Interpretationreasoning
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    The decreased number of cortical spines in APOE4 mice could be caused by a decrease in spine formation and/or an increase in elimination.

    “Therefore, the decreased number of cortical spines in APOE4 mice could be caused by a decrease in spine formation and/or an increase in elimination.”
    Quote in the paperSubstantial claim
  • Classified as probably not a substantial claim. May combine two claims.

    Premisecitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    Mushroom spines represent more stable synaptic connections (memory spines), whereas thin spines are more dynamic and respond to changes in synaptic connections (learning spines).

    “It has been proposed that mushroom spines represent more stable synaptic connections (memory spines), whereas thin spines are more dynamic and respond to changes in synaptic connections (learning spines) (Bourne and Harris, 2007).”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Bourne and Harris, 2007 source
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    Young mice have many long, thin dendritic protrusions known as filopodia, which may be spine precursors.

    “Young mice have many long, thin dendritic protrusions known as filopodia, which may be spine precursors (Alvarez and Sabatini, 2007).”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Alvarez and Sabatini, 2007 source
  • Classified as probably not a substantial claim.

    Interpretationreasoning
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    It is difficult to conclude that the structural differences observed between isoforms actually represent variations in synaptic strength and integrity, because the authors did not distinguish between spine subtypes in their analysis.

    “However, it is difficult to conclude that the structural differences observed between isoforms actually represent variations in synaptic strength and integrity, because the authors did not distinguish between spine subtypes in their analysis.”
    Quote in the paperSubstantial claim
  • Classified as probably not a substantial claim.

    Interpretationreasoning
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    It is premature to conclude that the lower spine density in the APOE4 mice represents the loss of a neuroprotective function.

    “However, APOE-null mice were not included in the 1-year-old cohort, so it is premature to conclude that the lower spine density in the APOE4 mice represents the loss of a neuroprotective function.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S1 (asserted), S3 (load-bearing).

    Interpretationcitation
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    The different levels of apoE protein could account for the differences observed between isoforms in their study.

    “As Dumanis et al. (2009) point out, the different levels of apoE protein could account for the differences observed between isoforms in their study.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Interpretationnone given
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    Whether these structural differences reflect functional changes in synaptic activity was not analyzed.

    “Whether these structural differences reflect functional changes in synaptic activity was not analyzed.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Interpretationreasoning
    § Differential Effects of ApoE Isoforms on Dendritic Spines In Vivo: Linking an Alzheimer's Disease Risk Factor with Synaptic Alterations

    It is possible that the differential effects of the APOE isoforms on dendritic spine may be altered or absent in the presence of high Aβ levels.

    “As a result, it is possible that the differential effects of the APOE isoforms on dendritic spine may be altered or absent in the presence of high A␤ levels.”
    Quote in the paperNot a substantial claim
14 of 14
  • The paper relies on this without support.

    The ε4 allele of apolipoprotein E (APOE) is the strongest genetic risk factor for the development of Alzheimer's disease (AD).

    “The ␧4 allele of apolipoprotein E (APOE) is the strongest genetic risk factor for the development of Alzheimer's disease (AD).”
  • The paper relies on this without support.

    Dendritic spines play an important role in synapse function as the site of excitatory glutamatergic synaptic input.

    “Dendritic spines, small protrusions along the length of the dendrite, play an important role in synapse function as the site of excitatory glutamatergic synaptic input.”
2 of 2

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • A hallmark of the ApoE4 mouse phenotype is reduced neuronal complexity, characterized by fewer, shorter, and less branched dendrites, including reduced dendritic spine density in the hippocampus and entorhinal cortex.

    “A hallmark of the ApoE4 mouse phenotype is reduced neuronal complexity, characterized by fewer, shorter, and less branched dendrites. This includes a major reduction in dendritic spine density in the hippocampus (specifically the dentate gyrus and CA1 regions) and the entorhinal cortex [26–28].”

    From Dyslipidemia-Induced Mitochondrial Dysfunctions in the Brains Does Not Reach Pathological Levels in the ApoE-Knockout Mice (2026) · cites this paper as [27]

    In its discussion of Dumanis et al. (2009) (page unavailable), the paper reports fewer spines in APOE4 cortical neurons and shorter cortical spines in one-year-old APOE4 mice. It also explicitly reports no difference in hippocampal spine density among the APOE isoforms. The copy does not establish the claimed reduction in the dentate gyrus, CA1, or entorhinal cortex, or that the dendrites themselves were fewer and shorter. (LLM, conf=0.90)

    Experimental — accuracy not yet measured
  • There is an association between the apoE4 and spine deficits in vivo.

    “Other previous studies also reported an association between the apoE4 and spine deficits in vivo (Basak and Kim, 2010; Dumanis et al., 2009; Ji et al., 2003; Wang et al., 2005).”

Cites

Flagged first, then by citations

Cited by

Sorted by citations

Authors
Basak, J. M., & Kim, J.
Affiliations
Washington University in St. Louis (US)
Venue
The Journal of Neuroscience
Published
2010-03-31
Volume
30
Issue
13
Pages
4526-4527
ISSN
  • 0270-6474 (ISSN-L)
  • 1529-2401
OpenAlex
W1980991647
Cited by
6
References
9
Citations by year
2026: 1 · 2025: 1 · 2021: 1 · 2014: 2 · 2012: 1
FWCI
0.19
Type
journal article
Language
en
Open access
Locations
  • Journal of Neuroscience (publishedVersion, cc-by-nc-sa)
  • PubMed (publishedVersion)
  • Digital Commons@Becker (Washington University School of Medicine) (submittedVersion)
  • PubMed Central (submittedVersion)
Topics
  • Health Sciences › Medicine › Physiology › Alzheimer's disease research and treatments
  • Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
  • Life Sciences › Neuroscience › Neurology › Neuroinflammation and Neurodegeneration Mechanisms
Keywords
apolipoprotein E, APOE ε4, dendritic spines, Alzheimer's disease, amyloid-beta, synaptic dysfunction, genetic risk factors, in vivo imaging, neuronal cell death

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-10-17.

Classified by jev-1.13-20260917 (gold-guideline-v0.2) on 2026-10-17.

Cited sources are checked by gpt-6-sol.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review