An introductory overview of image-based computational modeling in personalized cardiovascular medicine.
Open accessAbstract
Cardiovascular diseases account for the number one cause of deaths in the world. Part of the reason for such grim statistics is our limited understanding of the underlying mechanisms causing these devastating pathologies, which is made difficult by the invasiveness of the procedures associated with their diagnosis (e.g., inserting catheters into the coronal artery to measure blood flow to the heart). Likewise, it is also difficult to design and test assistive devices without implanting them in vivo. However, with the recent advancements made in biomedical scanning technologies and computer simulations, image-based modeling (IBM) has arisen as the next logical step in the evolution of non-invasive patient-specific cardiovascular medicine. Yet, due to its novelty, it is still relatively unknown outside of the niche field. Therefore, the goal of this manuscript is to review the current state-of-the-art and the limitations of the methods used in this area of research, as well as their applications to personalized cardiovascular investigations and treatments. Specifically, the modeling of three different physics – electrophysiology, biomechanics and hemodynamics - used in the cardiovascular IBM is discussed in the context of the physiology that each one of them describes and the mechanisms of the underlying cardiac diseases that they can provide insight into. Only the “bare-bones” of the modeling approaches are discussed in order to make this introductory material more accessible to an outside observer. Additionally, the imaging methods, the aspects of the unique cardiac anatomy derived from them, and their relation to the modeling algorithms are reviewed. Finally, conclusions are drawn about the future evolution of these methods and their potential towards revolutionizing the non-invasive diagnosis, virtual design of treatments / assistive devices, and increasing our understanding of these lethal cardiovascular diseases.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
When imaging data is noisy, an alternative rule-based methodology can be utilized to simulate electrical wave propagation and mechanical contraction in the heart.
“However, when imaging data is noisy, an alternative rule-based methodology can be utilized to simulate electrical wave propagation and mechanical contraction in the heart (Bayer et al., 2012; Lopez-Perez et al., 2015; Nguyen et al., 2020).”
From Thoroughly Calibrated Modular Agent-Based Model of the Human Cardiovascular and Renal Systems for Blood Pressure Regulation in Health and Disease (2021) · cites this paper as Nguyen et al., 2020
The Geometry Module’s “Rule-Based Heuristics” section describes rule-based estimates of myocardial fiber orientation as an alternative when microstructural details are difficult to image in a beating heart. The paper links fiber structure to both electrical conduction and mechanical contraction, but it does not specifically identify noisy imaging data as the reason to use the rule-based approach; its Imaging-to-Modeling Pipeline section instead discusses reducing image noise through post-processing. Page numbers were not available in our copy. (LLM, conf=0.83)
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Three-dimensional cardiac computational modelling: methods, features and applications.
Lopez-Perez, A., Sebastian, R., & Ferrero, J. M. (2015) · BioMedical Engineering OnLine · doi:10.1186/s12938-015-0033-5 · Cited by 151 · see citing works
Validation and Trustworthiness of Multiscale Models of Cardiac Electrophysiology
Pathmanathan, P., & Gray, R. A. (2018) · Frontiers in Physiology · doi:10.3389/fphys.2018.00106 · Cited by 63 · see citing works
Image-Based Predictive Modeling of Heart Mechanics
Wang, V. Y., Nielsen, P. M. F., & Nash, M. P. (2015) · Annual Review of Biomedical Engineering · doi:10.1146/annurev-bioeng-071114-040609 · Cited by 63 · cited 3× · see citing works
“…2015; Beheshti et al., 2016; Gray and Pathmanathan, 2018; Ni et al., 2018); tissue mechanics computations (Trayanova, 2011, 2012; Sun et al., 2014; Wang et al., 2015; Chabiniok et al., 2016; Niederer et al., 2019a,b), ventricular thrombosis (Mittal et al., 2016) and the use of models in…”
BackgroundInfluential
Flagged first, then by citations
Research works printed but not linked: 135
- Antzelevitch C. (2001). Basic mechanisms of reentrant arrhythmias. Curr. Opin. Cardiol. 16 1– 7. 10.1097/00001573-200101000-00001 11124712 · DOI
- Appleton B. Qing W. Crozier S. Feng L. Wilson S. Ling X. (2005). “ An electrical heart model incorporating real geometry and motion,” in Proceedings of the 27th Annual Conference IEEE Engineering in Medicine and Biology, Shanghai, 345– 348. 17282184
- Arevalo H. J. Vadakkumpadan F. Guallar E. Jebb A. Malamas P. Wu K. C. (2016). Arrhythmia risk stratification of patients after myocardial infarction using personalized heart models. Nat. Commun. 7: 11437. 10.1038/ncomms11437 27164184 PMC4866040 · DOI
- Ashikaga H. Arevalo H. Vadakkumpadan F. Blake R. C. Bayer J. D. Nazarian S. (2013). Feasibility of image-based simulation to estimate ablation target in human ventricular arrhythmia. Heart Rhythm 10 1109– 1116. 10.1016/j.hrthm.2013.04.015 23608593 PMC3735782 · DOI
- Aslanidi O. V. Nikolaidou T. Zhao J. Smaill B. H. Gilbert S. H. Holden A. V. (2013). Application of micro-computed tomography with iodine staining to cardiac imaging, segmentation, and computational model development. IEEE Trans. Med. Imaging 32 8– 17. 10.1109/TMI.2012.2209183 22829390 PMC3493467 · DOI
- Avazmohammadi R. Soares J. S. Li D. S. Raut S. S. Gorman R. C. Sacks M. S. (2019). A contemporary look at biomechanical models of myocardium. Annu. Rev. Biomed. Eng. 21 417– 442. 10.1146/annurev-bioeng-062117-121129 31167105 PMC6626320 · DOI
- Bayer J. D. Blake R. C. Plank G. Trayanova N. A. (2012). A novel rule-based algorithm for assigning myocardial fiber orientation to computational heart models. Ann. Biomed. Eng. 40 2243– 2254. 10.1007/s10439-012-0593-5 22648575 PMC3518842 · DOI · Paper page
- Beheshti M. Umapathy K. Krishnan S. (2016). Electrophysiological cardiac modeling: a review. Crit Rev Biomed Eng. 44 99– 122. 10.1615/CritRevBiomedEng.2016016454 27652454 · DOI
- Behradfar E. Nygren A. Vigmond E. J. (2014). The role of Purkinje-myocardial coupling during ventricular arrhythmia: a modeling study. PLoS One 9: e88000. 10.1371/journal.pone.0088000 24516576 PMC3917859 · DOI
- Bestel J. Clément F. Sorine M. (2001). “ A biomechanical model of muscle contraction,” in Medical Image Computing and Computer-Assisted Intervention – MICCAI 2001, eds Niessen W. J. Viergever M. A. (Berlin: Springer), 1159– 1161. 10.1007/3-540-45468-3_143 · DOI
- Bishop M. J. Plank G. (2011). Bidomain ECG simulations using an augmented monodomain model for the cardiac source. Proc. IEEE Trans. Biomed. Eng. 58 2297– 2307. 10.1109/TBME.2011.2148718 21536529 PMC3378475 · DOI
- Bishop M. J. Plank G. Burton R. A. Schneider J. E. Gavaghan D. J. Grau V. (2010). Development of an anatomically detailed MRI-derived rabbit ventricular model and assessment of its impact on simulations of electrophysiological function. Am. J. Physiol. Heart Circ. Physiol. 298 H699– H718. 10.1152/ajpheart.00606.2009 19933417 PMC2822578 · DOI
- Bonfanti M. Franzetti G. Maritati G. Homer-Vanniasinkam S. Balabani S. Díaz-Zuccarini V. (2019). Patient-specific haemodynamic simulations of complex aortic dissections informed by commonly available clinical datasets. Med. Eng. Phys. 71 45– 55. 10.1016/j.medengphy.2019.06.012 31257054 · DOI
- Boyle P. M. Masse S. Nanthakumar K. Vigmond E. J. (2013). Transmural IK(ATP) heterogeneity as a determinant of activation rate gradient during early ventricular fibrillation: mechanistic insights from rabbit ventricular models. Heart Rhythm 10 1710– 1717. 10.1016/j.hrthm.2013.08.010 23948344 PMC3826179 · DOI
- Boyle P. M. Zahid S. Trayanova N. A. (2016). Towards personalized computational modelling of the fibrotic substrate for atrial arrhythmia. Europace 18 (Suppl. 4), iv136– iv145. 10.1093/europace/euw358 28011841 PMC5841887 · DOI
- Bruegmann T. Boyle P. M. Vogt C. C. Karathanos T. V. Arevalo H. J. Fleischmann B. K. (2016). Optogenetic defibrillation terminates ventricular arrhythmia in mouse hearts and human simulations. J. Clin. Invest. 126 3894– 3904. 10.1172/JCI88950 27617859 PMC5096832 · DOI
- Burton R. A. Plank G. Schneider J. E. Grau V. Ahammer H. Keeling S. L. (2006). Three-dimensional models of individual cardiac histoanatomy: tools and challenges. Ann. N. Y. Acad. Sci. 1080 301– 319. 10.1196/annals.1380.023 17132791 PMC3313659 · DOI
- Cabo C. Boyden P. A. (2003). Electrical remodeling of the epicardial border zone in the canine infarcted heart: a computational analysis. Am. J. Physiol. Heart Circ. Physiol. 284 H372– H384. 10.1152/ajpheart.00512.2002 12388240 · DOI
- Cardenes R. Sebastian R. Berruezo A. Camara O. (2014). “ Inverse estimation of ventricular Purkinje tree pathways from sequences of depolarization,” in Proceedings of the 2014 Conference on Computing in Cardiology, Cambridge, MA, 677– 680.
- Casa L. D. C. Deaton D. H. Ku D. N. (2015). Role of high shear rate in thrombosis. J. Vasc. Surg. 61 1068– 1080. 10.1016/j.jvs.2014.12.050 25704412 · DOI
- Chabiniok R. Wang V. Y. Hadjicharalambous M. Asner L. Lee J. Sermesant M. (2016). Multiphysics and multiscale modelling, data–model fusion and integration of organ physiology in the clinic: ventricular cardiac mechanics. Interf. Focus 6: 20150083. 10.1098/rsfs.2015.0083 27051509 PMC4759748 · DOI
- Cheng Y. Oertel H. Schenkel T. (2005). Fluid-structure coupled CFD simulation of the left ventricular flow during filling phase. Ann. Biomed. Eng. 33 567– 576. 10.1007/s10439-005-4388-9 15981858 · DOI
- Chnafa C. Mendez S. Nicoud F. (2014). Image-based large-eddy simulation in a realistic left heart. Comput. Fluids 94 173– 187. 10.1016/j.compfluid.2014.01.030 · DOI
- Choi Y. J. Constantino J. Vedula V. Trayanova N. Mittal R. (2015). A new MRI-based model of heart function with coupled hemodynamics and application to normal and diseased canine left ventricles. Front. Bioeng. Biotechnol. 3: 140. 10.3389/fbioe.2015.00140 26442254 PMC4585083 · DOI
- Dass S. Suttie J. J. Piechnik S. K. Ferreira V. M. Holloway C. J. Banerjee R. (2012). Myocardial tissue characterization using magnetic resonance noncontrast t1 mapping in hypertrophic and dilated cardiomyopathy. Circ. Cardiovasc. Imaging 5 726– 733. 10.1161/CIRCIMAGING.112.976738 23071146 · DOI
- Decker K. F. Rudy Y. (2010). Ionic mechanisms of electrophysiological heterogeneity and conduction block in the infarct border zone. Am. J. Physiol. Heart Circ. Physiol. 299 H1588– H1597. 10.1152/ajpheart.00362.2010 20709867 PMC2993197 · DOI
- Deng D. Arevalo H. J. Prakosa A. Callans D. J. Trayanova N. A. (2016). A feasibility study of arrhythmia risk prediction in patients with myocardial infarction and preserved ejection fraction. Europace 18 (Suppl. 4), iv60– iv66. 10.1093/europace/euw351 28011832 PMC5225965 · DOI
- Deng D. Jiao P. Ye X. Xia L. (2012). An image-based model of the whole human heart with detailed anatomical structure and fiber orientation. Comput. Math. Methods Med. 2012: 891070. 10.1155/2012/891070 22952559 PMC3431151 · DOI
- Deng D. Prakosa A. Shade J. Nikolov P. Trayanova N. A. (2019). Sensitivity of ablation targets prediction to electrophysiological parameter variability in image-based computational models of ventricular tachycardia in post-infarction patients. Front. Physiol. 10: 628. 10.3389/fphys.2019.00628 31178758 PMC6543853 · DOI
- Dokos S. Smaill B. H. Young A. A. LeGrice I. J. (2002). Shear properties of passive ventricular myocardium. Am. J. Physiol. Heart Circ. Physiol. 283 H2650– H2659. 10.1152/ajpheart.00111.2002 12427603 · DOI
- Dolan A. T. Diamond S. L. (2014). Systems modeling of Ca(2+) homeostasis and mobilization in platelets mediated by IP3 and store-operated Ca(2+) entry. Biophys. J. 106 2049– 2060. 10.1016/j.bpj.2014.03.028 24806937 PMC4017292 · DOI
- Donati F. Myerson S. Bissell M. M. Smith N. P. Neubauer S. Monaghan M. J. (2017). Beyond Bernoulli: improving the accuracy and precision of noninvasive estimation of peak pressure drops. Circ. Cardiovasc. Imaging 10: e005207. 10.1161/CIRCIMAGING.116.005207 28093412 PMC5265685 · DOI
- Durrer D. Van Dam R. T. H. Freud G. E. Janse M. J. Meijler F. L. Arzbaecher R. C. (1970). Total excitation of the isolated human heart. Circulation 41 899– 912. 10.1161/01.CIR.41.6.899 5482907 · DOI
- Finsberg H. Xi C. Tan J. L. Zhong L. Genet M. Sundnes J. (2018). Efficient estimation of personalized biventricular mechanical function employing gradient-based optimization. Int. J. Numer. Method Biomed. Eng. 34: e2982. 10.1002/cnm.2982 29521015 PMC6043386 · DOI
- Flachskampf F. A. Weyman A. E. Guerrero J. L. Thomas J. D. (1990). Influence of orifice geometry and flow rate on effective valve area: an in vitro study. J. Am. Coll. Cardiol. 15 1173– 1180. 10.1016/0735-1097(90)90260-V 2312974 · DOI
- Flamm M. H. Colace T. V. Chatterjee M. S. Jing H. Zhou S. Jaeger D. (2012). Multiscale prediction of patient-specific platelet function under flow. Blood 120 190– 198. 10.1182/blood-2011-10-388140 22517902 PMC3390957 · DOI
- Frangi A. F. Rueckert D. Schnabel J. A. Niessen W. J. (2002). Automatic construction of multiple-object three-dimensional statistical shape models: application to cardiac modeling. IEEE Trans. Med. Imaging 21 1151– 1166. 10.1109/TMI.2002.804426 12564883 · DOI
- Fritz T. Wieners C. Seemann G. Steen H. Dossel O. (2014). Simulation of the contraction of the ventricles in a human heart model including atria and pericardium. Biomech. Model. Mechanobiol. 13 627– 641. 10.1007/s10237-013-0523-y 23990017 · DOI
- Goldberger J. J. Buxton A. E. Cain M. Costantini O. Exner D. V. Knight B. P. (2011). Risk stratification for arrhythmic sudden cardiac death: identifying the roadblocks. Circulation 123 2423– 2430. 10.1161/CIRCULATIONAHA.110.959734 21632516 · DOI
- Grande Gutierrez N. Kahn A. Burns J. C. Marsden A. L. (2017). Computational blood flow simulations in Kawasaki disease patients: insight into coronary artery aneurysm hemodynamics. Glob. Cardiol. Sci. Pract. 2017: e201729. 10.21542/gcsp.2017.29 29564350 PMC5856960 · DOI
- Grande Gutierrez N. Mathew M. McCrindle B. W. Tran J. S. Kahn A. M. Burns J. C. (2019). Hemodynamic variables in aneurysms are associated with thrombotic risk in children with Kawasaki disease. Int. J. Cardiol. 281 15– 21. 10.1016/j.ijcard.2019.01.092 30728104 PMC6511338 · DOI
- Gray R. A. Pathmanathan P. (2018). Patient-specific cardiovascular computational modeling: diversity of personalization and challenges. J. Cardiovasc. Transl. Res. 11 80– 88. 10.1007/s12265-018-9792-2 29512059 PMC5908828 · DOI
- Guccione J. M. Salahieh A. Moonly S. M. Kortsmit J. Wallace A. W. Ratcliffe M. B. (2003). Myosplint decreases wall stress without depressing function in the failing heart: a finite element model study. Ann. Thorac. Surg. 76 1171– 1180. 10.1016/s0003-4975(03)00731-8 14530007 · DOI
- Harfi T. T. Seo J. H. Yasir H. S. Welsh N. Mayer S. A. Abraham T. P. (2017). The E-wave propagation index (EPI): a novel echocardiographic parameter for prediction of left ventricular thrombus. Derivation from computational fluid dynamic modeling and validation on human subjects. Int. J. Cardiol. 227 662– 667. 10.1016/j.ijcard.2016.10.079 27838120 · DOI
- Hathcock James J. (2006). Flow effects on coagulation and thrombosis. Arterioscl. Thromb. Vasc. Biol. 26 1729– 1737. 10.1161/01.ATV.0000229658.76797.30 16741150 · DOI
- Hockin M. F. Jones K. C. Everse S. J. Mann K. G. (2002). A model for the stoichiometric regulation of blood coagulation. J. Biol. Chem. 277 18322– 18333. 10.1074/jbc.M201173200 11893748 · DOI
- Hodgkin A. L. Huxley A. F. (1952). A quantitative description of membrane current and its application to conduction and excitation in nerve. J. Physiol. 117 500– 544. 10.1113/jphysiol.1952.sp004764 12991237 PMC1392413 · DOI · Paper page
- Holmes A. A. Scollan D. F. Winslow R. L. (2000). Direct histological validation of diffusion tensor MRI in formaldehyde-fixed myocardium. Magn. Reson. Med. 44 157– 161. 10.1002/1522-2594(200007)44:1<157::aid-mrm22<3.0.co;2-f 10893534 · DOI
- Holzapfel G. A. Ogden R. W. (2009). Constitutive modelling of passive myocardium: a structurally based framework for material characterization. Philos. Trans. A Math. Phys. Eng. Sci. 367 3445– 3475. 10.1098/rsta.2009.0091 19657007 · DOI
- Hooks D. A. Tomlinson K. A. Marsden S. G. LeGrice I. J. Smaill B. H. Pullan A. J. (2002). Cardiac microstructure: implications for electrical propagation and defibrillation in the heart. Circ. Res. 91 331– 338. 10.1161/01.res.0000031957.70034.89 12193466 · DOI
- Hooks D. A. Trew M. L. Smaill B. H. Pullan A. J. (2006). Do intramural virtual electrodes facilitate successful defibrillation? Model-based analysis of experimental evidence. J. Cardiovasc. Electrophysiol. 17 305– 311. 10.1111/j.1540-8167.2006.00360.x 16643406 · DOI
- Huxley A. F. (1957). 6 - Muscle structure and theories of contraction. Prog. Biophys. Biophys. Chem. 7 255– 318. 10.1016/S0096-4174(18)30128-8 13485191 · DOI
- Ideker R. E. Kong W. Pogwizd S. (2009). Purkinje fibers and arrhythmias. Pac. Clin. Electrophysiol. PACE 32 283– 285. 10.1111/j.1540-8159.2008.02232.x 19272054 PMC2743071 · DOI
- Kayvanpour E. Mansi T. Sedaghat-Hamedani F. Amr A. Neumann D. Georgescu B. (2015). Towards personalized cardiology: multi-scale modeling of the failing heart. PLoS One 10: e0134869. 10.1371/journal.pone.0134869 26230546 PMC4521877 · DOI
- Keldermann R. H. ten Tusscher K. H. W. J. Nash M. P. Bradley C. P. Hren R. Taggart P. (2009). A computational study of mother rotor VF in the human ventricles. Am. J. Physiol. Heart Circ. Physiol. 296 H370– H379. 10.1152/ajpheart.00952.2008 19060124 PMC2643893 · DOI
- Kim H. J. Vignon-Clementel I. E. Coogan J. S. Figueroa C. A. Jansen K. E. Taylor C. A. (2010). Patient-specific modeling of blood flow and pressure in human coronary arteries. Ann. Biomed. Eng. 38 3195– 3209. 10.1007/s10439-010-0083-6 20559732 · DOI
- Kim H. J. Vignon-Clementel I. E. Figueroa C. A. LaDisa J. F. Jansen K. E. Feinstein J. A. (2009). On coupling a lumped parameter heart model and a three-dimensional finite element aorta model. Ann. Biomed. Eng. 37 2153– 2169. 10.1007/s10439-009-9760-8 19609676 · DOI
- Kohl P. Noble D. Hunter P. J. Kovács S. J. McQueen D. M. Peskin C. S. (2001). Modelling cardiac fluid dynamics and diastolic function. Philos. Trans. R. Soc. Lond. Ser. A Math. Phys. Eng. Sci. 359 1299– 1314. 10.1098/rsta.2001.0832 · DOI
- Koo B. K. Erglis A. Doh J. H. Daniels D. V. Jegere S. Kim H. S. (2011). Diagnosis of ischemia-causing coronary stenoses by noninvasive fractional flow reserve computed from coronary computed tomographic angiograms. Results from the prospective multicenter DISCOVER-FLOW (Diagnosis of Ischemia-Causing Stenoses Obtained Via Noninvasive Fractional Flow Reserve) study. J. Am. Coll. Cardiol. 58 1989– 1997. 10.1016/j.jacc.2011.06.066 22032711 · DOI
- Krishnamurthy A. Villongco C. T. Chuang J. Frank L. R. Nigam V. Belezzuoli E. (2013). Patient-specific models of cardiac biomechanics. J. Comput. Phys. 244 4– 21. 10.1016/j.jcp.2012.09.015 23729839 PMC3667962 · DOI
- Krueger M. W. Schulze W. H. Rhode K. S. Razavi R. Seemann G. Dossel O. (2013a). Towards personalized clinical in-silico modeling of atrial anatomy and electrophysiology. Med. Biol. Eng. Comput. 51 1251– 1260. 10.1007/s11517-012-0970-0 23070728 · DOI
- Krueger M. W. Seemann G. Rhode K. Keller D. U. J. Schilling C. Arujuna A. (2013b). Personalization of atrial anatomy and electrophysiology as a basis for clinical modeling of radio-frequency ablation of atrial fibrillation. IEEE Trans. Med. Imaging 32 73– 84. 10.1109/TMI.2012.2201948 22665507 · DOI
- Kung E. Kahn A. M. Burns J. C. Marsden A. (2014). In vitro validation of patient-specific hemodynamic simulations in coronary aneurysms caused by Kawasaki disease. Cardiovasc. Eng. Technol. 5 189– 201. 10.1007/s13239-014-0184-8 25050140 PMC4103185 · DOI
- Lamata P. Casero R. Carapella V. Niederer S. A. Bishop M. J. Schneider J. E. (2014). Images as drivers of progress in cardiac computational modelling. Prog. Biophys. Mol. Biol. 115 198– 212. 10.1016/j.pbiomolbio.2014.08.005 25117497 PMC4210662 · DOI
- Lee A. W. C. Costa C. M. Strocchi M. Rinaldi C. A. Niederer S. A. (2018). Computational modeling for cardiac resynchronization therapy. J. Cardiovasc. Transl. Res. 11 92– 108. 10.1007/s12265-017-9779-4 29327314 PMC5908824 · DOI
- Lee L. C. Wall S. T. Klepach D. Ge L. Zhang Z. Lee R. J. (2013). Algisyl-LVR with coronary artery bypass grafting reduces left ventricular wall stress and improves function in the failing human heart. Int. J. Cardiol. 168 2022– 2028. 10.1016/j.ijcard.2013.01.003 23394895 PMC3748222 · DOI
- Li X. Li H. Chang H. Y. Lykotrafitis G. Em Karniadakis G. (2017). Computational biomechanics of human red blood cells in hematological disorders. J. Biomech. Eng. 139 0210081– 02100813. 10.1115/1.4035120 PMC5395917 27814430 · DOI
- Lopez-Perez A. Sebastian R. Izquierdo M. Ruiz R. Bishop M. Ferrero J. M. (2019). Personalized cardiac computational models: from clinical data to simulation of infarct-related ventricular tachycardia. Front. Physiol. 10: 580. 10.3389/fphys.2019.00580 31156460 PMC6531915 · DOI
- Meoli A. Cutri E. Krishnamurthy A. Dubini G. Migliavacca F. Hsia T. Y. (2015). A multiscale model for the study of cardiac biomechanics in single-ventricle surgeries: a clinical case. Interface Focus 5: 20140079. 10.1098/rsfs.2014.0079 25844151 PMC4342947 · DOI
- Mewton N. Liu C. Y. Croisille P. Bluemke D. Lima J. A. (2011). Assessment of myocardial fibrosis with cardiovascular magnetic resonance. J. Am. Coll. Cardiol. 57 891– 903. 10.1016/j.jacc.2010.11.013 21329834 PMC3081658 · DOI
- Mihalef V. Ionasec R. I. Sharma P. Georgescu B. Voigt I. Suehling M. (2011). Patient-specific modelling of whole heart anatomy, dynamics and haemodynamics from four-dimensional cardiac CT images. Interface Focus 1 286– 296. 10.1098/rsfs.2010.0036 22670200 PMC3262442 · DOI
- Min J. K. Koo B. K. Erglis A. Doh J. H. Daniels D. V. Jegere S. (2012). Usefulness of noninvasive fractional flow reserve computed from coronary computed tomographic angiograms for intermediate stenoses confirmed by quantitative coronary angiography. Am. J. Cardiol. 110 971– 976. 10.1016/j.amjcard.2012.05.033 22749390 · DOI
- Min J. K. Taylor C. A. Achenbach S. Koo B. K. Leipsic J. Norgaard B. L. (2015). Noninvasive fractional flow reserve derived from coronary CT angiography: clinical data and scientific principles. JACC Cardiovasc. Imaging 8 1209– 1222. 10.1016/j.jcmg.2015.08.006 26481846 · DOI
- Mincholé A. Zacur E. Ariga R. Grau V. Rodriguez B. (2019). MRI-based computational torso/biventricular multiscale models to investigate the impact of anatomical variability on the ECG QRS complex. Front. Physiol. 10: 1103. 10.3389/fphys.2019.01103 31507458 PMC6718559 · DOI
- Mittal R. Seo J. H. Vedula V. Choi Y. J. Liu H. Huang H. H. (2016). Computational modeling of cardiac hemodynamics: current status and future outlook. J. Comput. Phys. 305 1065– 1082. 10.1016/j.jcp.2015.11.022 · DOI
- Moireau P. Xiao N. Astorino M. Figueroa C. A. Chapelle D. Taylor C. A. (2012). External tissue support and fluid-structure simulation in blood flows. Biomech. Model. Mechanobiol. 11 1– 18. 10.1007/s10237-011-0289-z 21308393 · DOI
- Morris P. D. Narracott A. von Tengg-Kobligk H. Silva Soto D. A. Hsiao S. Lungu A. (2016). Computational fluid dynamics modelling in cardiovascular medicine. Heart 102 18– 28. 10.1136/heartjnl-2015-308044 26512019 PMC4717410 · DOI
- Negroni J. A. Lascano E. C. (2008). Simulation of steady state and transient cardiac muscle response experiments with a Huxley-based contraction model. J. Mol. Cell Cardiol. 45 300– 312. 10.1016/j.yjmcc.2008.04.012 18550079 · DOI
- Ni H. Morotti S. Grandi E. (2018). A heart for diversity: simulating variability in cardiac arrhythmia research. Front. Physiol. 9: 958. 10.3389/fphys.2018.00958 30079031 PMC6062641 · DOI
- Niederer S. A. Campbell K. S. Campbell S. G. (2019a). A short history of the development of mathematical models of cardiac mechanics. J. Mol. Cell. Cardiol. 127 11– 19. 10.1016/j.yjmcc.2018.11.015 30503754 PMC6525149 · DOI
- Niederer S. A. Lumens J. Trayanova N. A. (2019b). Computational models in cardiology. Nat. Rev. Cardiol. 16 100– 111. 10.1038/s41569-018-0104-y 30361497 PMC6556062 · DOI
- O’Hara T. Virag L. Varro A. Rudy Y. (2011). Simulation of the undiseased human cardiac ventricular action potential: model formulation and experimental validation. PLoS Comput. Biol. 7: e1002061. 10.1371/journal.pcbi.1002061 21637795 PMC3102752 · DOI · Paper page
- Palamara S. Vergara C. Catanzariti D. Faggiano E. Pangrazzi C. Centonze M. (2014). Computational generation of the Purkinje network driven by clinical measurements: the case of pathological propagations. Int. J. Numer. Methods Biomed. Eng. 30 1558– 1577. 10.1002/cnm.2689 25319252 · DOI
- Palit A. Bhudia S. K. Arvanitis T. N. Turley G. A. Williams M. A. (2018). In vivo estimation of passive biomechanical properties of human myocardium. Med. Biol. Eng. Comput. 56 1615– 1631. 10.1007/s11517-017-1768-x 29479659 PMC6096751 · DOI
- Papadacci C. Finel V. Provost J. Villemain O. Bruneval P. Gennisson J.-L. (2017). Imaging the dynamics of cardiac fiber orientation in vivo using 3D ultrasound backscatter tensor imaging. Sci. Rep. 7: 830. 10.1038/s41598-017-00946-7 28400606 PMC5429761 · DOI
- Patel M. R. Dai D. Hernandez A. F. Douglas P. S. Messenger J. Garratt K. N. (2014). Prevalence and predictors of nonobstructive coronary artery disease identified with coronary angiography in contemporary clinical practice. Am. Heart J. 167 846– 852e842. 10.1016/j.ahj.2014.03.001 24890534 · DOI
- Plank G. Burton R. A. B. Hales P. Bishop M. Mansoori T. Bernabeu M. O. (2009). Generation of histo-anatomically representative models of the individual heart: tools and application. Philos. Trans. R. Soc. A Math. Phys. Eng. Sci. 367 2257– 2292. 10.1098/rsta.2009.0056 19414455 PMC2881535 · DOI
- Potse M. Krause D. Kroon W. Murzilli R. Muzzarelli S. Regoli F. (2014). Patient-specific modelling of cardiac electrophysiology in heart-failure patients. Europace 16 (Suppl. 4), iv56– iv61. 10.1093/europace/euu257 25362171 PMC4217520 · DOI
- Prakosa A. Arevalo H. J. Deng D. Boyle P. M. Nikolov P. P. Ashikaga H. (2018). Personalized virtual-heart technology for guiding the ablation of infarct-related ventricular tachycardia. Nat. Biomed. Eng. 2 732– 740. 10.1038/s41551-018-0282-2 30847259 PMC6400313 · DOI
- Quarteroni A. Lassila T. Rossi S. Ruiz-Baier R. (2017). Integrated heart—coupling multiscale and multiphysics models for the simulation of the cardiac function. Comput. Methods Appl. Mech. Eng. 314 345– 407. 10.1016/j.cma.2016.05.031 · DOI
- Rice J. J. Wang F. Bers D. M. de Tombe P. P. (2008). Approximate model of cooperative activation and crossbridge cycling in cardiac muscle using ordinary differential equations. Biophys. J. 95 2368– 2390. 10.1529/biophysj.107.119487 18234826 PMC2517033 · DOI
- Rodriguez B. Carusi A. Abi-Gerges N. Ariga R. Britton O. Bub G. (2015). Human-based approaches to pharmacology and cardiology: an interdisciplinary and intersectorial workshop. EP Europace 18 1287– 1298. 10.1093/europace/euv320 26622055 PMC5006958 · DOI
- Romero D. Sebastian R. Bijnens B. H. Zimmerman V. Boyle P. M. Vigmond E. J. (2010). Effects of the purkinje system and cardiac geometry on biventricular pacing: a model study. Ann. Biomed. Eng. 38 1388– 1398. 10.1007/s10439-010-9926-4 20094915 · DOI
- Roney C. H. Williams S. E. Cochet H. Mukherjee R. K. O’Neill L. Sim I. (2018). Patient-specific simulations predict efficacy of ablation of interatrial connections for treatment of persistent atrial fibrillation. Europace 20 (Suppl. 3), iii55– iii68. 10.1093/europace/euy232 30476055 PMC6251187 · DOI
- Rossi S. Lassila T. Ruiz-Baier R. Sequeira A. Quarteroni A. (2014). Thermodynamically consistent orthotropic activation model capturing ventricular systolic wall thickening in cardiac electromechanics. Eur. J. Mech. A/Solids 48 129– 142. 10.1016/j.euromechsol.2013.10.009 · DOI
- Ruiz-Baier R. Gizzi A. Rossi S. Cherubini C. Laadhari A. Filippi S. (2014). Mathematical modelling of active contraction in isolated cardiomyocytes. Math. Med. Biol. 31 259– 283. 10.1093/imammb/dqt009 23760444 · DOI
- Sainte-Marie J. Chapelle D. Cimrman R. Sorine M. (2006). Modeling and estimation of the cardiac electromechanical activity. Comput. Struct. 84 1743– 1759. 10.1016/j.compstruc.2006.05.003 · DOI
- Schulte R. F. Sands G. B. Sachse F. B. Dössel O. Pullan A. J. (2001). Creation of a human heart, model and its customisation using ultrasound images. Biomed. Eng. 46 26– 28. 10.1515/bmte.2001.46.s2.26 · DOI
- Scollan D. F. Holmes A. Winslow R. Forder J. (1998). Histological validation of myocardial microstructure obtained from diffusion tensor magnetic resonance imaging. Am. J. Physiol. Heart Circ. Physiol. 275 H2308– H2318. 10.1152/ajpheart.1998.275.6.H2308 9843833 · DOI
- Sebastian R. Zimmerman V. Romero D. Sanchez-Quintana D. Frangi A. F. (2013). Characterization and modeling of the peripheral cardiac conduction system. IEEE Trans. Med. Imaging 32 45– 55. 10.1109/TMI.2012.2221474 23047864 · DOI
- Segers P. Stergiopulos N. Westerhof N. (2002). Relation of effective arterial elastance to arterial system properties. Am. J. Physiol. Heart Circ. Physiol. 282 H1041– H1046. 10.1152/ajpheart.00764.2001 11834502 · DOI
- Seo J. H. Abd T. George R. T. Mittal R. (2016). A coupled chemo-fluidic computational model for thrombogenesis in infarcted left ventricles. Am. J. Physiol. Heart Circ. Physiol. 310 H1567– H1582. 10.1152/ajpheart.00855.2015 27016582 · DOI
- Sermesant M. Peyrat J.-M. Chinchapatnam P. Billet F. Mansi T. Rhode K. (2008). Toward patient-specific myocardial models of the heart. Heart Fail. Clin. 4 289– 301. 10.1016/j.hfc.2008.02.014 18598981 · DOI
- Shavik S. M. Tossas-Betancourt C. Figueroa C. A. Baek S. Lee L. C. (2020). Multiscale modeling framework of ventricular-arterial bi-directional interactions in the cardiopulmonary circulation. Front. Physiol. 11: 2. 10.3389/fphys.2020.00002 32116737 PMC7025512 · DOI
- Shibeshi S. S. Collins W. E. (2005). The rheology of blood flow in a branched arterial system. Applied 15 398– 405. 10.1901/jaba.2005.15-398 16932804 PMC1552100 · DOI
- Smith N. de Vecchi A. McCormick M. Nordsletten D. Camara O. Frangi A. F. (2011). euHeart: personalized and integrated cardiac care using patient-specific cardiovascular modelling. Interface Focus 1 349– 364. 10.1098/rsfs.2010.0048 22670205 PMC3262448 · DOI
- Sommer G. Schriefl A. J. Andrä M. Sacherer M. Viertler C. Wolinski H. (2015). Biomechanical properties and microstructure of human ventricular myocardium. Acta Biomater. 24 172– 192. 10.1016/j.actbio.2015.06.031 26141152 · DOI · Paper page
- Starobin J. M. Zilberter Y. I. Rusnak E. M. Starmer C. F. (1996). Wavelet formation in excitable cardiac tissue: the role of wavefront-obstacle interactions in initiating high-frequency fibrillatory-like arrhythmias. Biophys. J. 70 581– 594. 10.1016/S0006-3495(96)79624-8 8789078 PMC1224961 · DOI
- Streeter Daniel D. Spotnitz Henry M. Patel Dali P. Ross J. Sonnenblick Edmund H. (1969). Fiber orientation in the canine left ventricle during diastole and systole. Circ. Res. 24 339– 347. 10.1161/01.RES.24.3.339 5766515 · DOI
- Su B. Zhong L. Wang X. K. Zhang J. M. Tan R. S. Allen J. C. (2014). Numerical simulation of patient-specific left ventricular model with both mitral and aortic valves by FSI approach. Comput. Methods Prog. Biomed. 113 474– 482. 10.1016/j.cmpb.2013.11.009 24332277 · DOI
- Sun W. Martin C. Pham T. (2014). Computational modeling of cardiac valve function and intervention. Annu. Rev. Biomed. Eng. 16 53– 76. 10.1146/annurev-bioeng-071813-104517 24819475 PMC5481457 · DOI
- Tang D. Yang C. Geva T. Del Nido P. J. (2010). Image-based patient-specific ventricle models with fluid-structure interaction for cardiac function assessment and surgical design optimization. Prog. Pediatr. Cardiol. 30 51– 62. 10.1016/j.ppedcard.2010.09.007 21344066 PMC3041970 · DOI
- Tobon-Gomez C. Duchateau N. Sebastian R. Marchesseau S. Camara O. Donal E. (2013). Understanding the mechanisms amenable to CRT response: from pre-operative multimodal image data to patient-specific computational models. Med. Biol. Eng. Comput. 51 1235– 1250. 10.1007/s11517-013-1044-7 23430328 · DOI
- Trayanova N. A. (2011). Whole-heart modeling: applications to cardiac electrophysiology and electromechanics. Circ. Res. 108 113– 128. 10.1161/CIRCRESAHA.110.223610 21212393 PMC3031963 · DOI
- Trayanova N. A. (2012). Computational cardiology: the heart of the matter. ISRN Cardiol. 2012: 269680. 10.5402/2012/269680 23213566 PMC3505657 · DOI
- Trayanova N. A. (2014). Mathematical approaches to understanding and imaging atrial fibrillation: significance for mechanisms and management. Circ. Res. 114 1516– 1531. 10.1161/CIRCRESAHA.114.302240 24763468 PMC4043630 · DOI
- Trayanova N. A. Chang K. C. (2016). How computer simulations of the human heart can improve anti-arrhythmia therapy. J. Physiol. 594 2483– 2502. 10.1113/JP270532 26621489 PMC4850196 · DOI
- Trayanova N. A. Pashakhanloo F. Wu K. C. Halperin H. R. (2017). Imaging-based simulations for predicting sudden death and guiding ventricular tachycardia ablation. Circ. Arrhythm. Electrophysiol. 10: e004743. 10.1161/CIRCEP.117.004743 28696219 PMC5543810 · DOI
- Vadakkumpadan F. Arevalo H. Prassl A. J. Chen J. Kickinger F. Kohl P. (2010). Image-based models of cardiac structure in health and disease. Wiley Interdiscip. Rev. Syst. Biol. Med. 2 489– 506. 10.1002/wsbm.76 20582162 PMC2889712 · DOI
- Vadakkumpadan F. Rantner L. J. Tice B. Boyle P. Prassl A. J. Vigmond E. (2009). Image-based models of cardiac structure with applications in arrhythmia and defibrillation studies. J. Electrocardiol. 42: e00151-10. 10.1016/j.jelectrocard.2008.12.003 19181330 PMC2819337 · DOI
- Valderrabano M. Chen P. S. Lin S. F. (2003). Spatial distribution of phase singularities in ventricular fibrillation. Circulation 108 354– 359. 10.1161/01.CIR.0000080322.67408.B4 12835210 · DOI
- Vandervoort Pieter M. Greenberg Neil L. Pu M. Powell Kimerly A. Cosgrove Delos M. Thomas James D. (1995). Pressure recovery in bileaflet heart valve prostheses. Circulation 92 3464– 3472. 10.1161/01.CIR.92.12.3464 8521568 · DOI
- Vetter F. J. McCulloch A. D. (1998). Three-dimensional analysis of regional cardiac function: a model of rabbit ventricular anatomy. Prog. Biophys. Mol. Biol. 69 157– 183. 10.1016/S0079-6107(98)00006-6 9785937 · DOI
- Vigmond E. J. Clements C. McQueen D. M. Peskin C. S. (2008). Effect of bundle branch block on cardiac output: a whole heart simulation study. Prog. Biophys. Mol. Biol. 97 520– 542. 10.1016/j.pbiomolbio.2008.02.022 18384847 · DOI
- Voorhees A. P. Han H.-C. (2015). Biomechanics of cardiac function. Comprehens. Physiol. 5 1623– 1644. 10.1002/cphy.c140070 26426462 PMC4668273 · DOI
- Walcott S. Sun S. X. (2009). Hysteresis in cross-bridge models of muscle. Phys. Chem. Chem. Phys. 11 4871– 4881. 10.1039/B900551J 19506762 · DOI
- Wall S. T. Walker J. C. Healy K. E. Ratcliffe M. B. Guccione J. M. (2006). Theoretical impact of the injection of material into the myocardium: a finite element model simulation. Circulation 114 2627– 2635. 10.1161/CIRCULATIONAHA.106.657270 17130342 · DOI
- Walmsley J. van Everdingen W. Cramer M. J. Prinzen F. W. Delhaas T. Lumens J. (2017). Combining computer modelling and cardiac imaging to understand right ventricular pump function. Cardiovasc. Res. 113 1486– 1498. 10.1093/cvr/cvx154 28957534 · DOI
- Wang W. King M. R. (2012). Multiscale modeling of platelet adhesion and thrombus growth. Ann. Biomed. Eng. 40 2345– 2354. 10.1007/s10439-012-0558-8 22481228 · DOI
- Washio T. Okada J. I. Sugiura S. Hisada T. (2012). Approximation for cooperative interactions of a spatially-detailed cardiac sarcomere model. Cell Mol. Bioeng. 5 113– 126. 10.1007/s12195-011-0219-2 22448201 PMC3291845 · DOI
- Watson S. R. Dormer J. D. Fei B. (2018). Imaging technologies for cardiac fiber and heart failure: a review. Heart Fail. Rev. 23 273– 289. 10.1007/s10741-018-9684-1 29500602 PMC6121700 · DOI
- Weese J. Groth A. Nickisch H. Barschdorf H. Weber F. M. Velut J. (2013). Generating anatomical models of the heart and the aorta from medical images for personalized physiological simulations. Med. Biol. Eng. Comput. 51 1209– 1219. 10.1007/s11517-012-1027-0 23359255 · DOI
- Zhang J. M. Zhong L. Luo T. Huo Y. Tan S. Y. Wong A. S. (2014). Numerical simulation and clinical implications of stenosis in coronary blood flow. Biomed. Res. Int. 2014: 514729. 10.1155/2014/514729 24987691 PMC4058689 · DOI
- Zhao J. Butters T. D. Zhang H. LeGrice I. J. Sands G. B. Smaill B. H. (2013). Image-based model of atrial anatomy and electrical activation: a computational platform for investigating atrial arrhythmia. IEEE Trans. Med. Imaging 32 18– 27. 10.1109/TMI.2012.2227776 23192521 · DOI
- Zhong L. Zhang J.-M. Su B. Tan R. S. Allen J. C. Kassab G. S. (2018). Application of patient-specific computational fluid dynamics in coronary and intra-cardiac flow simulations: challenges and opportunities. Front. Physiol. 9: 742. 10.3389/fphys.2018.00742 29997520 PMC6028770 · DOI
Cited by
Sorted by citations
Kutumova, E., Kiselev, I., Sharipov, R., Lifshits, G., & Kolpakov, F. (2021) · Frontiers in Physiology · doi:10.3389/fphys.2021.746300 · Cited by 16 · see citing works
- Authors
- Nguyen, T. D., Kadri, O. E., & Voronov, R. S.
- Affiliations
- New Jersey Institute of Technology (US)
- Corresponding author
- Voronov, Roman S.
- Venue
- Frontiers in Bioengineering and Biotechnology
- Publisher
- Frontiers Media SA
- Published
- 2020-09-25
- Volume
- 8
- Pages
- 529365-529365
- ISSN
- 2296-4185 (ISSN-L)
- PMC
- PMC7546862
- OpenAlex
- W3088135601
- Cited by
- 19
- References
- 3
- Citations by year
- 2026: 3 · 2025: 1 · 2024: 6 · 2023: 3 · 2022: 3 · 2021: 3
- FWCI
- 0.33
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Frontiers in Bioengineering and Biotechnology (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Funders
- New Jersey Health Foundation
- Gustavus and Louise Pfeiffer Research Foundation
- Topics
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Cardiac Imaging and Diagnostics
- Physical Sciences › Engineering › Biomedical Engineering › Elasticity and Material Modeling
- Physical Sciences › Engineering › Biomedical Engineering › Anatomy and Medical Technology
- Keywords
- image-based modeling, patient-specific cardiac modeling, cardiac electrophysiology, cardiac biomechanics, hemodynamics, cardiac imaging, cardiac anatomy, non-invasive diagnosis, assistive devices, cardiovascular disease
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review