Cited by 468Medical Image Segmentation TechniquesAI in cancer detectionBrain Tumor Detection and Classification

RA-UNet: A Hybrid Deep Attention-Aware Network to Extract Liver and Tumor in CT Scans

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Jin, Qiangguo, Meng, Zhaopeng, Sun, Changming, Cui, Hui, Su, Ran·2020·Frontiers in Bioengineering and Biotechnology

Abstract

Automatic extraction of liver and tumor from CT volumes is a challenging task due to their heterogeneous and diffusive shapes. Recently, 2D deep convolutional neural networks have become popular in medical image segmentation tasks because of the utilization of large labeled datasets to learn hierarchical features. However, few studies investigate 3D networks for liver tumor segmentation. In this paper, we propose a 3D hybrid residual attention-aware segmentation method, i.e., RA-UNet, to precisely extract the liver region and segment tumors from the liver. The proposed network has a basic architecture as U-Net which extracts contextual information combining low-level feature maps with high-level ones. Attention residual modules are integrated so that the attention-aware features change adaptively. This is the first work that an attention residual mechanism is used to segment tumors from 3D medical volumetric images. We evaluated our framework on the public MICCAI 2017 Liver Tumor Segmentation dataset and tested the generalization on the 3DIRCADb dataset. The experiments show that our architecture obtains competitive results.

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Research works printed but not linked: 4

  1. Christ P. F. Ettlinger F. Grun F. Elshaer M. E. A. Lipkova J. Schlecht S. (2017a). Automatic liver and tumor segmentation of CT and MRI Volumes using cascaded fully convolutional neural networks. arXiv: Computer Vision and Pattern Recognition.
  2. Heker M. Greenspan H. (2020). Joint liver lesion segmentation and classification via transfer learning. arXiv [Preprint]. arXiv:2004.12352.31946038
  3. Jin Q. Meng Z. Sun C. Wei L. Su R. (2018). RA-UNet: A hybrid deep attention-aware network to extract liver and tumor in CT scans. arXiv [Preprint]. arXiv:1811.01328. PMC7785874 33425871 · arXiv
  4. WHO (2014b). World Cancer Report 2014. Chapter 5.6.

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Authors
Jin, Q., Meng, Z., Sun, C., Cui, H., & Su, R.
Affiliations
  • Commonwealth Scientific and Industrial Research Organisation (AU)
  • Tianjin University of Traditional Chinese Medicine (CN)
  • La Trobe University (AU)
  • Tianjin University (CN)
Corresponding author
Su, Ran
Venue
Frontiers in Bioengineering and Biotechnology
Published
2020-12-23
Volume
8
Pages
605132-605132
ISSN
2296-4185 (ISSN-L)
OpenAlex
W2899279931
Cited by
468
References
70
Citations by year
2026: 32 · 2025: 78 · 2024: 81 · 2023: 102 · 2022: 92 · 2021: 53 · 2020: 23 · 2019: 7
FWCI
26.24
Type
journal article
Language
en
Open access
Locations
  • Frontiers in Bioengineering and Biotechnology (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • arXiv (Cornell University) (submittedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
  • arXiv (Cornell University)
Funders
National Natural Science Foundation of China (16ZXHLGX00170, 61702361)
Topics
  • Physical Sciences › Computer Science › Computer Vision and Pattern Recognition › Medical Image Segmentation Techniques
  • Physical Sciences › Computer Science › Artificial Intelligence › AI in cancer detection
  • Life Sciences › Neuroscience › Neurology › Brain Tumor Detection and Classification
Keywords
liver tumor segmentation, liver segmentation, 3D medical image segmentation, attention mechanism, residual attention module, U-Net, computed tomography, volumetric medical images, 3DIRCADb

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