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The Relationship among Tyrosine Decarboxylase and Agmatine Deiminase Pathways in Enterococcus faecalis
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Cites
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method
Livak, K. J., & Schmittgen, T. D. (2001) · Methods · doi:10.1006/meth.2001.1262 · Cited by 180,860
Mutation of the mouse klotho gene leads to a syndrome resembling ageing
Kuro-o, M., Matsumura, Y., Aizawa, H., Kawaguchi, H., Suga, T., Utsugi, T., Ohyama, Y., Kurabayashi, M., Kaname, T., Kume, E., et al. (1997) · Nature · doi:10.1038/36285 · Cited by 3,837
(BIOHAZ), E. P. O. B. H. (2011) · EFSA Journal · doi:10.2903/j.efsa.2011.2393 · Cited by 995
Linares, D. M., del Rio, B., Redruello, B., Ladero, V., Martin, M. C., Fernandez, M., Ruas-Madiedo, P., & Alvarez, M. A. (2016) · Food Chemistry · doi:10.1016/j.foodchem.2015.11.013 · Cited by 196
Self-citationPessione, E., Pessione, A., Lamberti, C., Coïsson, D. J., Riedel, K., Mazzoli, R., Bonetta, S., Eberl, L., & Giunta, C. (2009) · PROTEOMICS · doi:10.1002/pmic.200800780 · Cited by 72
Research works printed but not linked: 35
- Alvarez, 2014, The problem of biogenic amines in fermented foods and the use of potential biogenic amine-degrading microorganisms as a solution., Trends Food Sci. Tech., 39, 146, 10.1016/j.tifs.2014.07.007 · DOI · Paper page
- Bargossi, 2017, Growth, biogenic amine production and tyrDC transcription of Enterococcus faecalis in synthetic medium containing defined amino acid concentrations., J. Appl. Microbiol., 122, 1078, 10.1111/jam.13406 · DOI · Paper page
- Bargossi, 2015, Tyrosine decarboxylase activity of enterococci grown in media with different nutritional potential: tyramine and 2-phenylethylamine accumulation and tyrDC gene expression., Front. Microbiol., 10, 10.3389/fmicb.2015.00259 · DOI
- Bonetta, 2008, Detection of biogenic amine producer bacteria in a typical Italian goat cheese., J. Food Prot., 71, 205, 10.1021/jf8000586 · DOI
- Burdychova, 2007, Biogenic amine-forming microbial communities in cheese., FEMS Microbiol. Lett., 276, 149, 10.1111/j.1574-6968.2007.00922.x · DOI
- Del Rio, 2017, The dietary biogenic amines tyramine and histamine show synergistic toxicity towards intestinal cells in culture., Food Chem., 218, 249, 10.1016/j.foodchem.2016.09.046 · DOI
- Drabik-Markiewicz, 2011, Influence of putrescine, cadaverine, spermidine or spermine on the formation of N-nitrosamine in heated cured pork meat., Food Chem., 126, 1539, 10.1016/j.foodchem.2010.11.149 · DOI
- Fernandez, 2007, HPLC quantification of biogenic amines in cheeses: correlation with PCR-detection of tyramine-producing microorganisms., J. Dairy Res., 74, 276, 10.1017/S0022029907002488 · DOI
- Giraffa, 2003, Functionality of enterococci in dairy products., Int. J. Food Microbiol., 88, 215, 10.1016/S0168-1605(03)00183-1 · DOI · Paper page
- Jimenez, 2013, Antibiotic resistance, virulence determinants and production of biogenic amines among enterococci from ovine, feline, canine, porcine and human milk., BMC Microbiol., 13, 10.1186/1471-2180-13-288 · DOI
- Ladero, Toxicological effects of dietary biogenic amines., Curr. Nutr. Food Sci., 6, 145, 10.2174/157340110791233256 · DOI · Paper page
- Ladero, Multiplex qPCR for the detection and quantification of putrescine-producing lactic acid bacteria in dairy products., Food Control, 27, 307, 10.1016/j.foodcont.2012.03.024 · DOI
- Ladero, Is the production of the biogenic amines tyramine and putrescine a species-level trait in enterococci?, Food Microbiol., 30, 132, 10.1016/j.fm.2011.12.016 · DOI
- Ladero, 2009, Isolation and identification of tyramine-producing enterococci from human fecal samples., Can. J. Microbiol., 55, 215, 10.1139/w08-133 · DOI
- Ladero, 2017, “Biogenic amines in dairy products,” in, Microbial Toxins in Dairy Products, 94, 10.1002/9781118823095.ch4 · DOI
- Ladero, qPCR for quantitative detection of tyramine-producing bacteria in dairy products., Food Res. Int., 43, 289, 10.1016/j.fm.2010.05.026 · DOI
- Ladero, 2011, Survival of biogenic amine-producing dairy LAB strains at pasteurisation conditions., Int. J. Food Sci. Tech., 46, 516, 10.1111/j.1365-2621.2010.02508.x · DOI
- Lamberti, 2011, ADI pathway and histidine decarboxylation are reciprocally regulated in Lactobacillus hilgardii ISE 5211: proteomic evidence., Amino Acids, 41, 517, 10.1007/s00726-010-0781-2 · DOI · Paper page
- Landete, 2007, Tyramine and phenylethylamine production among lactic acid bacteria isolated from wine., Int. J. Food Microbiol., 115, 364, 10.1016/j.ijfoodmicro.2006.10.051 · DOI
- Linares, 2012, Factors influencing biogenic amines accumulation in dairy products., Front. Microbiol., 3, 10.3389/fmicb.2012.00180 · DOI · Paper page
- Linares, 2015, AguR, a transmembrane transcription activator of the putrescine biosynthesis operon in Lactococcus lactis, acts in response to the agmatine concentration., Appl. Environ. Microbiol., 81, 6145, 10.1128/AEM.00959-15 · DOI
- Linares, 2009, Tyramine biosynthesis in Enterococcus durans is transcriptionally regulated by the extracellular pH and tyrosine concentration., Microb. Biotechnol., 2, 625, 10.1111/j.1751-7915.2009.00117.x · DOI · Paper page
- Linares, 2014, An agmatine-inducible system for the expression of recombinant proteins in Enterococcus faecalis., Microb. Cell Fact., 13, 10.1186/s12934-014-0169-1 · DOI
- Mader, 2002, Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability., J. Bacteriol., 184, 4288, 10.1128/JB.184.15.4288-4295.2002 · DOI
- Mazzoli, 2010, Glutamate-induced metabolic changes in Lactococcus lactis NCDO 2118 during GABA production: combined transcriptomic and proteomic analysis., Amino Acids, 39, 727, 10.1007/s00726-010-0507-5 · DOI · Paper page
- Paulsen, 2003, Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis., Science, 299, 2071, 10.1126/science.1080613 · DOI · Paper page
- Perez, 2015, Tyramine biosynthesis is transcriptionally induced at low pH and improves the fitness of Enterococcus faecalis in acidic environments., Appl. Microbiol. Biotech., 99, 3547, 10.1007/s00253-014-6301-7 · DOI · Paper page
- Perez, 2016, Transcriptome profiling of TDC cluster deletion mutant of Enterococcus faecalis V583., Genom Data, 9, 67, 10.1016/j.gdata.2015.10.002 · DOI
- Pessione, 2012, Lactic acid bacteria contribution to gut microbiota complexity: lights and shadows., Front. Cell Infect. Microbiol., 2, 10.3389/fcimb.2012.00086 · DOI · Paper page
- Redruello, 2013, A fast, reliable, ultra high performance liquid chromatography method for the simultaneous determination of amino acids, biogenic amines and ammonium ions in cheese, using diethyl ethoxymethylenemalonate as a derivatising agent., Food Chem., 139, 1029, 10.1016/j.foodchem.2013.01.071 · DOI
- Russo, 2012, Biogenic amine production by the wine Lactobacillus brevis IOEB 9809 in systems that partially mimic the gastrointestinal tract stress., BMC Microbiol., 12, 10.1186/1471-2180-12-247 · DOI
- Sahm, 1989, In vitro susceptibility studies of vancomycin-resistant Enterococcus faecalis., Antimicrob. Agents Chemother., 33, 1588, 10.1128/AAC.33.9.1588 · DOI · Paper page
- Suarez, 2013, Expression of the agmatine deiminase pathway in Enterococcus faecalis is activated by the AguR regulator and repressed by CcpA and PTSMan systems., PLOS ONE, 8, 10.1371/journal.pone.0076170 · DOI
- Teixeira, 2014, Glutamine, glutamate, and arginine-based acid resistance in Lactobacillus reuteri., Food Microbiol., 42, 172, 10.1016/j.fm.2014.03.015 · DOI
- ten Brink, 1990, Occurrence and formation of biologically active amines in foods., Int. J. Food Microbiol., 11, 73, 10.1016/0168-1605(90)90040-C · DOI
Cited by
Biogenic Amine Production by Lactic Acid Bacteria: A Review
Barbieri, F., Montanari, C., Gardini, F., & Tabanelli, G. (2019) · Foods · doi:10.3390/foods8010017 · Cited by 528
Viral Infections, the Microbiome, and Probiotics
Harper, A., Vijayakumar, V., Ouwehand, A. C., ter Haar, J., Obis, D., Espadaler, J., Binda, S., Desiraju, S., & Day, R. (2021) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2020.596166 · Cited by 177
Dwiyanto, J., Hussain, M. H., Reidpath, D., Ong, K. S., Qasim, A., Lee, S. W. H., Lee, S. M., Foo, S. C., Chong, C. W., & Rahman, S. (2021) · Scientific Reports · doi:10.1038/s41598-021-82311-3 · Cited by 161
Penha, R. O., Vandenberghe, L. P. S., Faulds, C., Soccol, V. T., & Soccol, C. R. (2020) · Planta · doi:10.1007/s00425-020-03357-7 · Cited by 151
Daisley, B. A., Chanyi, R. M., Abdur-Rashid, K., Al, K. F., Gibbons, S., Chmiel, J. A., Wilcox, H., Reid, G., Anderson, A., Dewar, M., et al. (2020) · Nature Communications · doi:10.1038/s41467-020-18649-5 · Cited by 128
Metadata
- Authors
- Perez, M., Ladero, V., del Rio, B., Redruello, B., de Jong, A., Kuipers, O., Kok, J., Martin, M. C., Fernandez, M., & Alvarez, M. A.
- Venue
- Frontiers in Microbiology
- Publisher
- Frontiers Media SA
- Published
- 2017-11-01
- Volume
- 8
- ISSN
- 1664-302X
- Cited by
- 23
- References
- 5
- Funders
- Consejo Superior de Investigaciones Científicas
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