The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Leveraging Pseudomonas Stress Response Mechanisms for Industrial Applications
Abstract
Members of the genus Pseudomonas are metabolically versatile and capable of adapting to a wide variety of environments. Stress physiology of Pseudomonas strains has been extensively studied because of their biotechnological potential in agriculture as well as their medical importance with regards to pathogenicity and antibiotic resistance. This versatility and scientific relevance led to a substantial amount of information regarding the stress response of a diverse set of species such as Pseudomonas chlororaphis , P. fluorescens , P. putida , P. aeruginosa , and P. syringae . In this review, environmental and industrial stressors including desiccation, heat, and cold stress, are cataloged along with their corresponding mechanisms of survival in Pseudomonas . Mechanisms of survival are grouped by the type of inducing stress with a focus on adaptations such as synthesis of protective substances, biofilm formation, entering a non-culturable state, enlisting chaperones, transcription and translation regulation, and altering membrane composition. The strategies Pseudomonas strains utilize for survival can be leveraged during the development of beneficial strains to increase viability and product efficacy.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“P. putida strains have become a focus of biocatalysis and biodegradation, including on the industrial scale (48–50), because of their resistance to various stresses other than fluoride stress.”
From Recombinant Pseudomonas growing on non-natural fluorinated substrates shows stress but overall tolerance to cytoplasmically released fluoride anion (2024) · cites this paper as [50]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Zooanthroponotic Transmission of Drug-Resistant Pseudomonas aeruginosa, Brazil
Fernandes, M. R., Sellera, F. P., Moura, Q., Carvalho, M. P. N., Rosato, P. N., Cerdeira, L., & Lincopan, N. (2018) · Emerging Infectious Diseases · doi:10.3201/eid2406.180335 · Cited by 90
Evolutionary Adaptation to Freeze‐Thaw‐Growth Cycles in Escherichia coli
Sleight, S. C., & Lenski, R. E. (2007) · Physiological and Biochemical Zoology · doi:10.1086/518013 · Cited by 32
Flagged first, then by citations
Research works printed but not linked: 162
- Aiello, 2019, Postharvest biocontrol ability of Pseudomonas synxantha against Monilinia fructicola and Monilinia fructigena on stone fruit., Postharv. Biol. Technol., 149, 83, 10.1016/j.postharvbio.2018.11.020 · DOI
- Alderson, 2016, Dynamical structures of Hsp70 and Hsp70-Hsp40 complexes., Structure, 24, 1014, 10.1016/j.str.2016.05.011 · DOI
- Ali, 2013, Isolation and characterization of drought-tolerant ACC deaminase and exopolysaccharide-producing fluorescent Pseudomonas sp., Ann. Microbiol., 64, 493, 10.1007/s13213-013-0680-3 · DOI
- Alix, 2006, “The Work of Chaperones,” in, Protein Synthesis and Ribosome Structure, 10.1002/3527603433.ch13 · DOI
- Anderson, 2018, Biopesticides produced by plant-probiotic Pseudomonas chlororaphis isolates., Crop Protect., 105, 62, 10.1016/j.cropro.2017.11.009 · DOI
- Anderson, 2018, Safety of Pseudomonas chlororaphis as a gene source for genetically modified crops., Transgenic Res., 27, 103, 10.1007/s11248-018-0061-6 · DOI · Paper page
- Anekella, 2013, Optimization of microencapsulation of probiotics in raspberry juice by spray drying., Food Sci. Technol., 50, 17, 10.1016/j.lwt.2012.08.003 · DOI
- Aramaki, 2001, Transcription analysis of rpoH in Pseudomonas putida., FEMS Microbiol. Lett., 205, 165, 10.1111/j.1574-6968.2001.tb10942.x · DOI
- Arana, 2010, Effect of temperature and starvation upon survival strategies of Pseudomonas fluorescens CHA0: Comparison with Escherichia coli., FEMS Microbiol. Ecol., 74, 500, 10.1111/j.1574-6941.2010.00979.x · DOI
- Ayrapetyan, 2018, Relationship between the viable but nonculturable state and antibiotic persister cells., J. Bacteriol., 200, 10.1128/jb.00249-18 · DOI
- Bashan, 2014, Advances in plant growth-promoting bacterial inoculant technology: Formulations and practical perspectives (1998–2013)., Plant Soil, 378, 1, 10.1007/s11104-013-1956-x · DOI
- Bédard, 2014, Recovery of Pseudomonas aeruginosa culturability following copper- and chlorine-induced stress., FEMS Microbiol. Lett., 356, 226, 10.1111/1574-6968.12494 · DOI
- Berger, 1997, capA, a cspA-like gene that encodes a cold acclimation protein in the psychrotrophic bacterium arthrobacter globiformis SI55., J. Bacteriol., 179, 5670, 10.1128/JB.179.18.5670-5676.1997 · DOI
- Berninger, 2018, Maintenance and assessment of cell viability in formulation of non-sporulating bacterial inoculants., Microbial Biotechnol., 11, 277, 10.1111/1751-7915.12880 · DOI
- Billi, 2000, Engineering desiccation tolerance in Escherichia coli., Appl. Environ. Microbiol., 66, 1680, 10.1128/AEM.66.4.1680-1684.2000 · DOI · Paper page
- Bittner, 2016, Mini review: ATP−dependent proteases in bacteria., Biopolymers, 105, 505, 10.1002/bip.22831 · DOI
- Boes, 2008, SpoT-triggered stringent response controls usp gene expression in Pseudomonas aeruginosa., J. Bacteriol., 190, 7189, 10.1128/jb.00600-08 · DOI
- Brown, 2004, Inorganic polyphosphate in the origin and survival of species., PNAS, 101, 16085, 10.1073/pnas.0406909101 · DOI · Paper page
- Bruijn, 2009, Regulation of cyclic lipopeptide biosynthesis in Pseudomonas fluorescens by the ClpP protease., J. Bacteriol., 191, 1910, 10.1128/JB.01558-08 · DOI
- Byrd, 2009, Genetic and biochemical analyses of the Pseudomonas aeruginosa psl exopolysaccharide reveal overlapping roles for polysaccharide synthesis enzymes in psl and LPS production., Mol. Microbiol., 73, 622, 10.1111/j.1365-2958.2009.06795.x · DOI
- Cabrefiga, 2014, Improvement of a dry formulation of Pseudomonas fluorescens EPS62e for fire blight disease biocontrol by combination of culture osmoadaptation with a freeze-drying lyoprotectant., J. Appl. Microbiol., 117, 1122, 10.1111/jam.12582 · DOI
- Cagliero, 2013, Dissociation and re-association of RNA polymerase with DNA during osmotic stress response in Escherichia coli., Nucleic Acids Res., 41, 315, 10.1093/nar/gks988 · DOI
- Cao-Hoang, 2008, Rates of chilling to 0°C: Implications for the survival of microorganisms and relationship with membrane fluidity modifications., Appl. Microbiol. Biotechnol., 77, 1379, 10.1007/s00253-007-1279-z · DOI
- Cebrián, 2017, Physiology of the inactivation of vegetative bacteria by thermal treatments: Mode of action, influence of environmental factors and inactivation kinetics., Foods, 6, 10.3390/foods6120107 · DOI
- Champagne, 1991, The freeze-drying of lactic acid bacteria. A review., Can. Instit. Food Sci. Technol. J., 24, 118, 10.1016/S0315-5463(91)70034-5 · DOI
- Chan, 2016, Transcriptome analysis of Pseudomonas aeruginosa PAO1 grown at both body and elevated temperatures., PeerJ, 4, 10.7717/peerj.2223 · DOI
- Chang, 2007, Alginate production by Pseudomonas putida creates a hydrated microenvironment and contributes to biofilm architecture and stress tolerance under water-limiting conditions., J. Bacteriol., 189, 8290, 10.1128/jb.00727-07 · DOI
- Chin-A-Woeng, 2003, Phenazines and their role in biocontrol by Pseudomonas bacteria., N. Phytol., 157, 503, 10.1046/j.1469-8137.2003.00686.x · DOI
- Chong, 2017, Microbial production of rhamnolipids: Opportunities, challenges and strategies., Microb. Cell Factor., 16, 137, 10.1186/s12934-017-0753-2 · DOI
- Chrzanowski, 2012, Why do microorganisms produce rhamnolipids?, World J. Microbiol. Biotechnol., 28, 401, 10.1007/s11274-011-0854-8 · DOI
- Cid, 2016, Properties and biotechnological applications of ice-binding proteins in bacteria., FEMS Microbiol. Lett., 363, 10.1093/femsle/fnw099 · DOI
- Clarke, 2003, Development of a diagnostic PCR assay that targets a heat-shock protein gene (groES) for detection of Pseudomonas spp. in cystic fibrosis patients., J. Med. Microbiol., 52, 759, 10.1099/jmm.0.05077-0 · DOI
- Collin, 2009, Bacterial sensing and signaling., 10.1159/isbn.978-3-8055-9133-1 · DOI
- Davis, 2014, Enumeration of probiotic strains: Review of culture-dependent and alternative techniques to quantify viable bacteria., J. Microbiol. Methods, 103, 9, 10.1016/j.mimet.2014.04.012 · DOI
- De Maayer, 2014, Some like it cold: Understanding the survival strategies of psychrophiles., EMBO Rep., 15, 508, 10.1002/embr.201338170 · DOI
- Díaz-Salazar, 2017, The stringent response promotes biofilm dispersal in Pseudomonas putida., Sci. Rep., 7, 18055, 10.1038/s41598-017-18518-0 · DOI
- Dubern, 2005, The heat shock genes dnaK, dnaJ, and grpE are involved in regulation of putisolvin biosynthesis in Pseudomonas putida PCL1445., J. Bacteriol., 187, 5967, 10.1128/JB.187.17.5967-5976.2005 · DOI
- Dziewit, 2013, Sequence determination and analysis of three plasmids of Pseudomonas sp. GLE121, a psychrophile isolated from surface ice of ecology glacier (antarctica)., Plasmid, 70, 254, 10.1016/j.plasmid.2013.05.007 · DOI
- Eheth, 2019, Less effect of wells physicochemical properties on the antimicrobial susceptibility Pseudomonas aeruginosa isolated in equatorial region of central Africa., Appl. Water Sci., 9, 1, 10.1007/s13201-019-0909-9 · DOI
- Errampalli, 2006, Biological and integrated control of postharvest blue mold (Penicillium expansum) of apples by Pseudomonas syringae and cyprodinil., Biol. Contr., 36, 49, 10.1016/j.biocontrol.2005.07.011 · DOI
- Esbelin, 2018, Desiccation: An environmental and food industry stress that bacteria commonly face., Food Microbiol., 69, 82, 10.1016/j.fm.2017.07.017 · DOI
- Fellows, 2009, Freeze drying and freeze concentration, 1
- Flemming, 2007, The EPS matrix: The “house of biofilm cells”., J. Bacteriol., 189, 7945, 10.1128/jb.00858-07 · DOI
- Folkesson, 2012, Adaptation of Pseudomonas aeruginosa to the cystic fibrosis airway: An evolutionary perspective., Nat. Rev. Microbiol., 10, 841, 10.1038/nrmicro2907 · DOI
- Frank, 2011, Functional genomics of the initial phase of cold adaptation of Pseudomonas putida KT2440., FEMS Microbiol. Lett., 318, 47, 10.1111/j.1574-6968.2011.02237.x · DOI
- Freeman, 2010, Identification of the trehalose biosynthetic loci of Pseudomonas syringae and their contribution to fitness in the phyllosphere., Environ. Microbiol., 12, 1486, 10.1111/j.1462-2920.2010.02171.x · DOI
- Freeman, 2013, Physiological and transcriptional responses to osmotic stress of two Pseudomonas syringae strains that differ in epiphytic fitness and osmotolerance., J. Bacteriol., 195, 4742, 10.1128/JB.00787-13 · DOI
- Fujita, 1998, Transcription of the groESL operon in Pseudomonas aeruginosa PAO1., FEMS Microbiol. Lett., 163, 237, 10.1016/S0378-1097(98)00174-8 · DOI
- Garba, 2016, Molecular cloning and functional expression of a Δ9- fatty acid desaturase from an Antarctic Pseudomonas sp., A3. PLoS One, 11, 10.1371/journal.pone.0160681 · DOI
- Garba, 2018, Homology modeling and docking studies of a Δ9-fatty acid desaturase from a cold-tolerant Pseudomonas sp. AMS8., PeerJ, 6, 10.7717/peerj.4347 · DOI
- Georgescauld, 2014, GroEL/ES chaperonin modulates the mechanism and accelerates the rate of TIM-barrel domain folding., Cell, 157, 922, 10.1016/j.cell.2014.03.038 · DOI
- Gomila, 2015, Phylogenomics and systematics in Pseudomonas., Front. Microbiol., 6, 214, 10.3389/fmicb.2015.00214 · DOI
- Gray, 2014, Oxidative stress protection by polyphosphate - new roles for an old player., Curr. Opin. Microbiol., 24, 1, 10.1016/j.mib.2014.12.004 · DOI
- Gulez, 2014, Colony morphology and transcriptome profiling of Pseudomonas putida KT2440 and its mutants deficient in alginate or all EPS synthesis under controlled matric potentials., MicrobiologyOpen, 3, 457, 10.1002/mbo3.180 · DOI
- Hadi, 2009, Biofilm removal by medical device cleaners: Comparison of two bioreactor detection assays., J. Hospit. Infect., 74, 160, 10.1016/j.jhin.2009.10.023 · DOI
- Hall, 2017, Two isoforms of clp peptidase in Pseudomonas aeruginosa control distinct aspects of cellular physiology., J. Bacteriol., 199, 10.1128/jb.00568-16 · DOI
- Han, 2019, Clinical characteristics and drug tolerance for Pseudomonas aeruginosa infection in patients with agranulocytosis and fever in shanghai., Eur. J. Inflamm., 17, 10.1177/2058739218824946 · DOI
- Heipieper, 2003, The cis–trans isomerase of unsaturated fatty acids in Pseudomonas and vibrio: Biochemistry, molecular biology and physiological function of a unique stress adaptive mechanism., 10.1016/S0378-1097(03)00792-4 · DOI · Paper page
- Hentzer, 2001, Alginate overproduction affects Pseudomonas aeruginosa biofilm structure and function., J. Bacteriol., 183, 5395, 10.1128/jb.183.18.5395-5401.2001 · DOI
- Huang, 2015, Global semi-arid climate change over last 60 years., Clim. Dynamics, 46, 1131, 10.1007/s00382-015-2636-8 · DOI
- Huang, 2018, Pyrrolnitrin is more essential than phenazines for Pseudomonas chlororaphis G05 in its suppression of fusarium graminearum., Microbiol. Res., 215, 55, 10.1016/j.micres.2018.06.008 · DOI
- Huq, 2013, Encapsulation of probiotic bacteria in biopolymeric system., Crit. Rev. Food Sci. Nutrit., 53, 909, 10.1080/10408398.2011.573152 · DOI
- Ito, 2014, Genetic and phenotypic characterization of the heat shock response in Pseudomonas putida., MicrobiologyOpen, 3, 922, 10.1002/mbo3.217 · DOI
- Jain, 2009, Effect of trehalose on protein structure., Protein Sci., 18, 24, 10.1002/pro.3 · DOI
- Kadmiri, 2020, Bioformulation of microbial fertilizer based on clay and alginate encapsulation., Curr. Microbiol., 78, 86, 10.1007/s00284-020-02262-2 · DOI
- Kawahara, 2001, Relationship between antifreeze protein and freezing resistance in Pseudomonas putida GR12-2., Curr. Microbiol., 43, 365, 10.1007/s002840010317 · DOI
- Kawahara, 2004, Production of two types of ice crystal-controlling proteins in antarctic bacterium., J. Biosci. Bioengine., 98, 220, 10.1016/S1389-1723(04)00271-3 · DOI
- Khakimova, 2013, The stringent response controls catalases in Pseudomonas aeruginosa and is required for hydrogen peroxide and antibiotic tolerance., J. Bacteriol., 195, 2011, 10.1128/jb.02061-12 · DOI
- Khan, 2003, Characterization and localization of fluorescent Pseudomonas cold shock protein(s) by monospecific polyclonal antibodies., Microbiol. Immunol., 47, 895, 10.1111/j.1348-0421.2003.tb03456.x · DOI
- Kirstein, 2009, Adapting the machine: Adaptor proteins for Hsp100/Clp and AAA+ proteases., Nat. Rev. Microbiol., 7, 589, 10.1038/nrmicro2185 · DOI
- Klinkert, 2009, Microbial thermosensors., Cell. Mol. Life Sci., 66, 2661, 10.1007/s00018-009-0041-3 · DOI
- Krajewski, 2013, Short ROSE-like RNA thermometers control IbpA synthesis in Pseudomonas species., PLoS One, 8, 10.1371/journal.pone.0065168 · DOI
- Kuhn, 2012, Toward understanding life under subzero conditions: The significance of exploring psychrophilic “Cold-shock” proteins., Astrobiology, 12, 178, 10.1089/ast.2012.0858 · DOI
- Kumar, 2020, Psychrophilic Pseudomonas helmanticensis proteome under simulated cold stress., Cell Stress Chaperones, 25, 1025, 10.1007/s12192-020-01139-4 · DOI
- Kurz, 2010, Genome-driven investigation of compatible solute biosynthesis pathways of Pseudomonas syringae pv. syringae and their contribution to water stress tolerance., Appl. Environ. Microbiol., 76, 5452, 10.1128/AEM.00686-10 · DOI
- Laue, 2006, Contribution of alginate and levan production to biofilm formation by Pseudomonas syringae., Microbiology, 152, 2909, 10.1099/mic.0.28875-0 · DOI
- Lawless, 2014, “Analysis of Chaperone Network Throughput,” in, The Molecular Chaperones Interaction Networks in Protein Folding and Degradation. Interactomics and Systems Biology
- Lebre, 2017, Xerotolerant bacteria: Surviving through a dry spell., Nat. Rev. Microbiol., 15, 285, 10.1038/nrmicro.2017.16 · DOI
- Lee, 2017, Complete genome sequence of Pseudomonas antarctica PAMC 27494, a bacteriocin-producing psychrophile isolated from antarctica., J. Biotechnol., 259, 15, 10.1016/j.jbiotec.2017.08.013 · DOI
- Lee, 2005, Cloning and expression of a trehalose synthase from Pseudomonas stutzeri CJ38 in Escherichia coli for the production of trehalose., Appl. Microbiol. Biotechnol., 68, 213, 10.1007/s00253-004-1862-5 · DOI
- Li, 2014, The importance of the viable but non-culturable state in human bacterial pathogens., Front. Microbiol., 5, 258, 10.3389/fmicb.2014.00258 · DOI
- Liu, 2018, The antioxidative function of alpha-ketoglutarate and its applications., BioMed Res. Int., 2018, 1, 10.1155/2018/3408467 · DOI
- Lopez, 2010, biofilms., Cold Spring Harb. Perspect. Biol., 2, 10.1101/cshperspect.a000398 · DOI
- Lowder, 2000, Effect of starvation and the viable-but-nonculturable state on green fluorescent protein (GFP) fluorescence in GFP-tagged Pseudomonas fluorescens A506., Appl. Environ. Microbiol., 66, 3160, 10.1128/aem.66.8.3160-3165.2000 · DOI
- Ma, 2012, The roles of biofilm matrix polysaccharide psl in mucoid Pseudomonas aeruginosa biofilms., FEMS Immunol. Med. Microbiol., 65, 377, 10.1111/j.1574-695X.2012.00934.x · DOI
- Mailloux, 2009, α-ketoglutarate dehydrogenase and glutamate dehydrogenase work in tandem to modulate the antioxidant α-ketoglutarate during oxidative stress in Pseudomonas fluorescens., J. Bacteriol., 191, 3804, 10.1128/JB.00046-09 · DOI
- Manaia, 2002, Pseudomonas thermotolerans sp. nov., a thermotolerant species of the genus Pseudomonas sensu stricto., Int. J. Systemat. Evolut. Microbiol., 52, 2203, 10.1099/00207713-52-6-2203 · DOI
- Mann, 2012, Pseudomonas biofilm matrix composition and niche biology., FEMS Microbiol. Rev., 36, 893, 10.1111/j.1574-6976.2011.00322.x · DOI
- Manuel, 2011, Repression of the antifungal activity of Pseudomonas sp. strain DF41 by the stringent response., Appl. Environ. Microbiol., 77, 5635, 10.1128/AEM.02875-10 · DOI
- Manuel, 2012, Stringent response mutants of Pseudomonas chlororaphis PA23 exhibit enhanced antifungal activity against Sclerotinia sclerotiorum in vitro., Microbiology, 158, 207, 10.1099/mic.0.053082-0 · DOI
- Marchand, 2009, Seasonal influence on heat-resistant proteolytic capacity of Pseudomonas lundensis and Pseudomonas fragi, predominant milk spoilers isolated from Belgian raw milk samples., Environ. Microbiol., 11, 467, 10.1111/j.1462-2920.2008.01785.x · DOI
- Marshall, 2019, Alginate genes are required for optimal soil colonization and persistence by Pseudomonas fluorescens Pf0-1., Access Microbiol., 1, 10.1099/acmi.0.000021 · DOI
- Mayer, 2000, Molecular basis for interactions of the DnaK chaperone with substrates., Biol. Chem., 381, 10.1515/BC.2000.109 · DOI
- Mensink, 2017, How sugars protect proteins in the solid state and during drying (review): Mechanisms of stabilization in relation to stress conditions., Eur. J. Pharmaceut. Biopharmaceut., 114, 288, 10.1016/j.ejpb.2017.01.024 · DOI
- Meyer, 2011, Proteolysis in the Escherichia coli heat shock response: A player at many levels., Curr. Opin. Microbiol., 14, 194, 10.1016/j.mib.2011.02.001 · DOI
- Mikkat, 2000, Salt adaptation in pseudomonads: Characterization of glucosylglycerol-synthesizing isolates from brackish coastal waters and the rhizosphere., Syst. Appl. Microbiol., 23, 31, 10.1016/s0723-2020(00)80043-0 · DOI
- Morris, 2008, The life history of the plant pathogen Pseudomonas syringae is linked to the water cycle., ISME J., 2, 321, 10.1038/ismej.2007.113 · DOI
- Muryoi, 2004, Cloning and expression of afpA, a gene encoding an antifreeze protein from the arctic plant growth-promoting rhizobacterium Pseudomonas putida GR12-2., J. Bacteriol., 186, 5661, 10.1128/jb.186.17.5661-5671.2004 · DOI
- Nakahigashi, 1998, Regulatory conservation and divergence of ς32 homologs from gram-negative bacteria: Serratia marcescens, proteus mirabilis, Pseudomonas aeruginosa, and agrobacterium tumefaciens., J. Bacteriol., 180, 2402, 10.1128/JB.180.9.2402-2408.1998 · DOI
- Nakaminami, 2006, Functional conservation of cold shock domains in bacteria and higher plants., PNAS, 103, 10122, 10.1073/pnas.0603168103 · DOI
- Narberhaus, 2010, Translational control of bacterial heat shock and virulence genes by temperature-sensing mRNAs., RNA Biol., 7, 84, 10.4161/rna.7.1.10501 · DOI
- Nikel, 2013, Accumulation of inorganic polyphosphate enables stress endurance and catalytic vigour in Pseudomonas putida KT2440., Microbial Cell Factor., 12, 10.1186/1475-2859-12-50 · DOI
- Nocker, 2001, ROSE elements occur in disparate rhizobia and are functionally interchangeable between species., Arch. Microbiol., 176, 44, 10.1007/s002030100294 · DOI
- Noll, 2019, Evaluating temperature-induced regulation of a ROSE-like RNA-thermometer for heterologous rhamnolipid production in Pseudomonas putida KT2440., AMB Express, 9, 1, 10.1186/s13568-019-0883-5 · DOI
- Ogura, 2001, AAA+ superfamily ATPases: Common structure-diverse function., Genes Cells Devoted Mol. Cell. Mechanis., 6, 575, 10.1046/j.1365-2443.2001.00447.x · DOI
- Otero-Asman, 2019, Diversity of extracytoplasmic function sigma (σ ECF) factor−dependent signaling in Pseudomonas., Mol. Microbiol., 112, 356, 10.1111/mmi.14331 · DOI
- Panicker, 2010, Occurrence and distribution of capB in Antarctic microorganisms and study of its structure and regulation in the Antarctic biodegradative Pseudomonas sp. 30/3., Extremophiles, 14, 171, 10.1007/s00792-009-0296-5 · DOI
- Park, 2007, Toluene−induced accumulation of trehalose by Pseudomonas sp. BCNU 106 through the expression of otsA and otsB homologues., Lett. Appl. Microbiol., 44, 50, 10.1111/j.1472-765X.2006.02036.x · DOI
- Parte, 2018, LPSN — List of Prokaryotic names with Standing in Nomenclature (bacterio.net), 20 years on., Int. J. Systemat. Evolution. Microbiol., 68, 1825, 10.1099/ijsem.0.002786 · DOI
- Pazos-Rojas, 2019, Desiccation-induced viable but nonculturable state in Pseudomonas putida KT2440, a survival strategy., PLoS One, 14, 10.1371/journal.pone.0219554 · DOI
- Phadtare, 2004, Genome-wide transcriptional analysis of the cold shock response in wild-type and cold-sensitive, quadruple-csp-deletion strains of Escherichia coli., J. Bacteriol., 186, 7007, 10.1128/jb.186.20.7007-7014.2004 · DOI
- Pletzer, 2016, Anti-biofilm peptides as a new weapon in antimicrobial warfare., Curr. Opin. Microbiol., 33, 35, 10.1016/j.mib.2016.05.016 · DOI
- Potvin, 2008, Sigma factors in Pseudomonas aeruginosa., FEMS Microbiol. Rev., 32, 38, 10.1111/j.1574-6976.2007.00092.x · DOI
- Pour, 2019, Investigating the formulation of alginate- gelatin encapsulated Pseudomonas fluorescens (VUPF5 and T17-4 strains) for controlling fusarium solani on potato., Int. J. Biol. Macromol., 133, 603, 10.1016/j.ijbiomac.2019.04.071 · DOI
- Power, 2011, Alginate beads as a storage, delivery and containment system for genetically modified PCB degrader and PCB biosensor derivatives of Pseudomonas fluorescens F113., J. Appl. Microbiol., 110, 1351, 10.1111/j.1365-2672.2011.04993.x · DOI
- Pravisya, 2018, Biotic priming with Pseudomonas fluorescens induce drought stress tolerance in abelmoschus esculentus (L.) moench (okra)., Physiol. Mol. Biol. Plants, 25, 101, 10.1007/s12298-018-0621-5 · DOI
- Priebe, 2014, Vaccines for Pseudomonas aeruginosa: A long and winding road., Expert Rev. Vaccines, 13, 507, 10.1586/14760584.2014.890053 · DOI
- Qiu, 2008, ClpXP proteases positively regulate alginate overexpression and mucoid conversion in Pseudomonas aeruginosa., Microbiology, 154, 2119, 10.1099/mic.0.2008/017368-0 · DOI
- Raaijmakers, 2010, Natural functions of lipopeptides from Bacillus and Pseudomonas: More than surfactants and antibiotics., FEMS Microbiol. Rev., 34, 1037, 10.1111/j.1574-6976.2010.00221.x · DOI · Paper page
- Ramos, 2001, Responses of gram-negative bacteria to certain environmental stressors., 10.1016/S1369-5274(00)00183-1 · DOI
- Raudales, 2014, Control of waterborne microbes in irrigation: A review., Agricult. Water Manage., 143, 9, 10.1016/j.agwat.2014.06.007 · DOI
- Rich, 2015, Biofilm formation and ethanol inhibition by bacterial contaminants of biofuel fermentation., Bioresour. Technol., 196, 347, 10.1016/j.biortech.2015.07.071 · DOI
- Richter, 2010, The heat shock response: Life on the verge of death., Mol. Cell, 40, 253, 10.1016/j.molcel.2010.10.006 · DOI
- Rolli, 2015, Improved plant resistance to drought is promoted by the root-associated microbiome as a water stress-dependent trait., Environ. Microbiol., 17, 316, 10.1111/1462-2920.12439 · DOI
- Roy, 2018, Strategies for combating bacterial biofilms: A focus on anti-biofilm agents and their mechanisms of action., Virulence, 9, 522, 10.1080/21505594.2017.1313372 · DOI
- Russell, 2003, Lethal effects of heat on bacterial physiology and structure., Sci. Prog., 86, 115, 10.3184/003685003783238699 · DOI
- Sandhya, 2010, Effect of plant growth promoting Pseudomonas spp. on compatible solutes, antioxidant status and plant growth of maize under drought stress., Plant Growth Regulat., 62, 21, 10.1007/s10725-010-9479-4 · DOI
- Schafhauser, 2014, The stringent response modulates 4-hydroxy-2-alkylquinoline biosynthesis and quorum-sensing hierarchy in Pseudomonas aeruginosa., J. Bacteriol., 196, 1641, 10.1128/jb.01086-13 · DOI
- Schiraldi, 2002, Trehalose production: Exploiting novel approaches., Trends Biotechnol., 20, 420, 10.1016/s0167-7799(02)02041-3 · DOI
- Schisler, 2016, Appraisal of selected osmoprotectants and carriers for formulating gram-negative biocontrol agents active against fusarium dry rot on potatoes in storage., Biol. Contr., 98, 1, 10.1016/j.biocontrol.2016.03.009 · DOI
- Schnider-Keel, 2001, The sigma factor AlgU (AlgT) controls exopolysaccharide production and tolerance towards desiccation and osmotic stress in the biocontrol agent Pseudomonas fluorescens CHA0., Appl. Environ. Microbiol., 67, 5683, 10.1128/AEM.67.12.5683-5693.2001 · DOI
- Schuster, 2004, The Pseudomonas aeruginosa RpoS regulon and its relationship to quorum sensing., Mol. Microbiol., 51, 973, 10.1046/j.1365-2958.2003.03886.x · DOI
- Shivaji, 2010, How do bacteria sense and respond to low temperature?, Arch. Microbiol., 192, 85, 10.1007/s00203-009-0539-y · DOI
- Silby, 2009, Requirement of polyphosphate by Pseudomonas fluorescens Pf0-1 for competitive fitness and heat tolerance in laboratory media and sterile soil., Appl. Environ. Microbiol., 75, 3872, 10.1128/AEM.00017-09 · DOI
- Singh, 2009, Conserved inserts in the Hsp60 (GroEL) and Hsp70 (DnaK) proteins are essential for cellular growth., Mol. Genet. Genomics MGG, 281, 361, 10.1007/s00438-008-0417-3 · DOI
- Singh, 2014, Antifreeze protein activity in arctic cryoconite bacteria., FEMS Microbiol. Lett., 351, 14, 10.1111/1574-6968.12345 · DOI
- Snider, 2008, The AAA+ superfamily of functionally diverse proteins., Genome Biol., 9, 216, 10.1186/gb-2008-9-4-216 · DOI
- Stoeckel, 2016, Growth of Pseudomonas weihenstephanensis, Pseudomonas proteolytica and Pseudomonas sp. in raw milk: Impact of residual heat-stable enzyme activity on stability of UHT milk during shelf-life., Int. Dairy J., 59, 20, 10.1016/j.idairyj.2016.02.045 · DOI
- Storz, 2011, Bacterial Stress Responses
- Su, 2013, Exploring the potential environmental functions of viable but non-culturable bacteria., World J. Microbiol. Biotechnol., 29, 2213, 10.1007/s11274-013-1390-5 · DOI
- Subramanian, 2016, Cold stress tolerance in psychrotolerant soil bacteria and their conferred chilling resistance in tomato (solanum lycopersicum mill.) under low temperatures., PLoS One, 11, 10.1371/journal.pone.0161592 · DOI
- Svenningsen, 2018, The biofilm matrix polysaccharides cellulose and alginate both protect Pseudomonas putida mt-2 against reactive oxygen species generated under matric stress and copper exposure., Microbiology, 164, 883, 10.1099/mic.0.000667 · DOI
- Thakur, 2013, Characterization of five ECF sigma factors in the genome of Pseudomonas syringae pv. syringae B728a., PLoS One, 8, 10.1371/journal.pone.0058846 · DOI
- Traxler, 2008, The global, ppGpp-mediated stringent response to amino acid starvation in Escherichia coli., Mol. Microbiol., 68, 1128, 10.1111/j.1365-2958.2008.06229.x · DOI
- Trevors, 2012, Bacterial gene expression at low temperatures., Extremoph. Life Under Extreme Condit., 16, 167, 10.1007/s00792-011-0423-y · DOI
- Troxler, 2012, Persistence of a biocontrol Pseudomonas inoculant as high populations of culturable and non-culturable cells in 200-cm-deep soil profiles., Soil Biol. Biochem., 44, 122, 10.1016/j.soilbio.2011.09.020 · DOI
- Valencia-Botín, 2012, A review of the studies and interactions of Pseudomonas syringae pathovars on wheat., Int. J. Agronomy, 2012, 10.1155/2012/692350 · DOI
- Varela, 2010, New structural and functional defects in polyphosphate deficient bacteria: A cellular and proteomic study., BMC Microbiol., 10, 7, 10.1186/1471-2180-10-7 · DOI
- Venketesh, 2008, Properties, potentials, and prospects of antifreeze proteins., Crit. Rev. Biotechnol., 28, 57, 10.1080/07388550801891152 · DOI
- Villeret, 1997, Preliminary crystal structure determination of the alkaline protease from the Antarctic psychrophile Pseudomonas aeruginosa., Protein Sci., 6, 2462, 10.1002/pro.5560061121 · DOI
- Vinella, 2005, Iron limitation induces SpoT-dependent accumulation of ppGpp in Escherichia coli., Mol. Microbiol., 56, 958, 10.1111/j.1365-2958.2005.04601.x · DOI
- Vorob’eva, 2004, Stressors, stress reactions, and survival of bacteria: A review., Appl. Biochem. Microbiol., 40, 217, 10.1023/B:ABIM.0000025941.11643.19 · DOI
- Vyas, 2009, Stress tolerance and genetic variability of phosphate-solubilizing fluorescent Pseudomonas from the cold deserts of the trans-himalayas., Microb. Ecol., 58, 425, 10.1007/s00248-009-9511-2 · DOI
- Wallace, 2017, Postharvest biological control of blue mold of apple by Pseudomonas fluorescens during commercial storage and potential modes of action., Postharv. Biolo. Technol., 133, 1, 10.1016/j.postharvbio.2017.07.003 · DOI
- Wang, 2002, A deep-sea hydrothermal vent isolate, Pseudomonas aeruginosa CW961, requires thiosulfate for Cd2+ tolerance and precipitation., Biotechnol. Lett., 24, 637, 10.1023/A:1015043324584 · DOI
- Wang, 2017, Structural basis of antifreeze activity of a bacterial multi-domain antifreeze protein., PLoS One, 12, 10.1371/journal.pone.0187169 · DOI
- Wang, 2014, Cloning and expression of a trehalose synthase from Pseudomonas putida KT2440 for the scale-up production of trehalose from maltose., Canad. J. Microbiol., 60, 599, 10.1139/cjm-2014-0330 · DOI
- Wang, Improvement of a dry formulation of Pseudomonas protegens SN15-2 against ralstonia solanacearum by combination of hyperosmotic cultivation with fluidized-bed drying., BioControl, 65, 10042, 10.1007/s10526-020-10042-x · DOI
- Wang, Hyperosmotic adaptation of Pseudomonas protegens SN15-2 helps cells to survive at lethal temperatures., Biotechnol. Bioproc. Engine., 25, 403, 10.1007/s12257-019-0430-x · DOI
- Wasi, 2013, Use of Pseudomonas spp. for the bioremediation of environmental pollutants: A review., Environ. Monitor. Assess., 185, 8147, 10.1007/s10661-013-3163-x · DOI
- Welsh, 2000, Ecological significance of compatible solute accumulation by micro-organisms: From single cells to global climate., FEMS Microbiol. Rev., 24, 263, 10.1016/S0168-6445(99)00038-8 · DOI
- Wu, 2020, The (p)ppGpp-mediated stringent response regulatory system globally inhibits primary metabolism and activates secondary metabolism in pseudomonas protegens H78., Appl. Microbiol. Biotechnol., 104, 3061, 10.1007/s00253-020-10421-5 · DOI
Cited by
Sorted by citations
Dodge, A. G., Thoma, C. J., O’Connor, M. R., & Wackett, L. P. (2024) · mBio · doi:10.1128/mbio.02785-23 · Cited by 23
Metadata
- Authors
- Craig, K., Johnson, B. R., & Grunden, A.
- Venue
- Frontiers in Microbiology
- Publisher
- Frontiers Media SA
- Published
- 2021-05-10
- Volume
- 12
- ISSN
- 1664-302X
- PMC
- PMC8141521
- Cited by
- 66
- References
- 2
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review