Involvement of ClC-3 chloride/proton exchangers in controlling glutamatergic synaptic strength in cultured hippocampal neurons
Open accessAbstract
ClC-3 is a member of the CLC family of anion channels and transporters that localizes to early and late endosomes as well as to synaptic vesicles (SV). Its genetic disruption in mouse models results in pronounced hippocampal and retinal neurodegeneration, suggesting that ClC-3 might be important for normal excitatory and/or inhibitory neurotransmission in central neurons. To characterize the role of ClC-3 in glutamate accumulation in SV we compared glutamatergic synaptic transmission in cultured hippocampal neurons from WT and Clcn3-/- mice. In Clcn3-/- neurons the amplitude and frequency of miniature as well as the amplitudes of action-potential evoked EPSCs were significantly increased as compared to WT neurons. The low-affinity competitive AMPA receptor antagonist γ-DGG reduced the quantal size of synaptic events more effectively in WT than in Clcn3-/- neurons, whereas no difference was observed for the high-affinity competitive non-NMDA antagonist NBQX. Paired pulse ratios of evoked EPSCs were significantly reduced, whereas the size of the readily releasable pool was not affected by the genetic ablation of ClC-3. Electron microscopy revealed increased volumes of SV in hippocampi of Clcn3-/- mice. Our findings demonstrate that ClC-3 controls fast excitatory synaptic transmission by regulating the amount of neurotransmitter as well as the release probability of SV. These results provide novel insights into the role of ClC-3 in synaptic transmission and identify excessive glutamate release as a likely basis of neurodegeneration in Clcn3-/-.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
CLCN3, SNAP91, and TSNARE1 are direct synaptic components, and CNTN4 and FURIN play roles in neurodevelopment.
“CLCN3, SNAP91, and TSNARE1 are direct synaptic components, and CNTN4 and FURIN play roles in neurodevelopment.”
From Gene expression elucidates functional impact of polygenic risk for schizophrenia (2016) · cites this paper as [27]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
THE USE OF LEAD CITRATE AT HIGH pH AS AN ELECTRON-OPAQUE STAIN IN ELECTRON MICROSCOPY
Reynolds, E. S. (1963) · The Journal of Cell Biology · doi:10.1083/jcb.17.1.208 · Cited by 24,938 · see citing works
Definition of the readily releasable pool of vesicles at hippocampal synapses.
Rosenmund, C., & Stevens, C. (1996) · Neuron · doi:10.1016/s0896-6273(00)80146-4 · Cited by 1,084 · see citing works
Rizzoli, S. O., & Betz, W. J. (2005) · Nature Reviews Neuroscience · doi:10.1038/nrn1583 · Cited by 975 · see citing works
Stobrawa, S. M., Breiderhoff, T., Takamori, S., Engel, D., Schweizer, M., Zdebik, A. A., Bösl, M. R., Rüether, K., Jahn, H., Draguhn, A., et al. (2001) · Neuron · doi:10.1016/s0896-6273(01)00189-1 · Cited by 508 · see citing works
Neurotransmitter Transporters in the Central Nervous System
Masson, J., Sagné, C., Hamon, M., & Mestikawy, S. E. (1999) · Pharmacological Reviews · doi:10.1016/s0031-6997(24)01414-5 · Cited by 413 · see citing works
CLC Chloride Channels and Transporters: From Genes to Protein Structure, Pathology and Physiology
Jentsch, T. J. (2008) · Critical Reviews in Biochemistry and Molecular Biology · doi:10.1080/10409230701829110 · Cited by 405 · see citing works
Maycox, P. R., Deckwerth, T. L., Hell, J. W., & Jahn, R. (1988) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)37605-7 · Cited by 361 · see citing works
Liu, G., Choi, S., & Tsien, R. W. (1999) · Neuron · doi:10.1016/s0896-6273(00)81099-5 · Cited by 356 · see citing works
Presynaptic Regulation of Quantal Size by the Vesicular Glutamate Transporter VGLUT1
Wilson, N. R., Kang, J., Hueske, E. V., Leung, T., Varoqui, H., Murnick, J. G., Erickson, J. D., & Liu, G. (2005) · The Journal of Neuroscience · doi:10.1523/jneurosci.3003-04.2005 · Cited by 335 · see citing works
Daniels, R. W., Collins, C. A., Gelfand, M. V., Dant, J., Brooks, E. S., Krantz, D. E., & DiAntonio, A. (2004) · Journal of Neuroscience · doi:10.1523/jneurosci.3001-04.2004 · Cited by 333 · see citing works
The vacuolar H+-ATPase: a universal proton pump of eukaryotes
Finbow, M. E., & Harrison, M. A. (1997) · Biochemical Journal · doi:10.1042/bj3240697 · Cited by 270 · see citing works
VGLUTs: ‘Exciting’ times for glutamatergic research?
Takamori, S. (2006) · Neuroscience Research · doi:10.1016/j.neures.2006.04.016 · Cited by 249 · see citing works
VMAT-Mediated Changes in Quantal Size and Vesicular Volume
Colliver, T. L., Pyott, S. J., Achalabun, M., & Ewing, A. G. (2000) · Journal of Neuroscience · doi:10.1523/jneurosci.20-14-05276.2000 · Cited by 213 · see citing works
Synaptic Vesicle Transporter Expression Regulates Vesicle Phenotype and Quantal Size
Pothos, E. N., Larsen, K. E., Krantz, D. E., Liu, Y., Haycock, J. W., Setlik, W., Gershon, M. D., Edwards, R. H., & Sulzer, D. L. (2000) · Journal of Neuroscience · doi:10.1523/jneurosci.20-19-07297.2000 · Cited by 211 · see citing works
Grønborg, M., Pavlos, N. J., Brunk, I., Chua, J. J. E., Münster‐Wandowski, A., Riedel, D., Ahnert‐Hilger, G., Urlaub, H., & Jahn, R. (2010) · Journal of Neuroscience · doi:10.1523/jneurosci.4074-09.2010 · Cited by 194 · see citing works
Cohen, F. S., Akabas, M. H., & Finkelstein, A. (1982) · Science · doi:10.1126/science.6283637 · Cited by 158 · see citing works
Du, J., Gray, N. A., Falke, C. A., Chen, W., Yuan, P., Szabo, S. T., Einat, H., & Manji, H. K. (2004) · The Journal of Neuroscience · doi:10.1523/jneurosci.1258-04.2004 · Cited by 157 · see citing works
CLC‐3 deficiency leads to phenotypes similar to human neuronal ceroid lipofuscinosis
Yoshikawa, M., Uchida, S., Ezaki, J., Rai, T., Hayama, A., Kobayashi, K., Kida, Y., Noda, M., Koike, M., Uchiyama, Y., et al. (2002) · Genes to Cells · doi:10.1046/j.1365-2443.2002.00539.x · Cited by 150 · see citing works
The ClC-3 chloride channel promotes acidification of lysosomes in CHO-K1 and Huh-7 cells
Li, X., Wang, T., Zhao, Z., & Weinman, S. A. (2002) · American Journal of Physiology-Cell Physiology · doi:10.1152/ajpcell.00504.2001 · Cited by 140 · see citing works
Gentzsch, M., Cui, L., Mengos, A. E., Chang, X.-B., Chen, J.-H., & Riordan, J. R. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m211050200 · Cited by 139 · see citing works
Monitoring synaptic transmission in primary neuronal cultures using local extracellular stimulation
Maximov, A., Pang, Z. P., Tervo, D. G. R., & Südhof, T. C. (2006) · Journal of Neuroscience Methods · doi:10.1016/j.jneumeth.2006.10.009 · Cited by 138 · see citing works
Determinants of clathrin-coated vesicle acidification.
Xie, X., Stone, D. K., & Racker, E. (1983) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)43737-9 · Cited by 125 · see citing works
Han, E. B., & Stevens, C. F. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0903603106 · Cited by 119 · see citing works
Folate transport in the central nervous system
Spector, R., & Lorenzo, A. V. (1975) · American Journal of Physiology-Legacy Content · doi:10.1152/ajplegacy.1975.229.3.777 · Cited by 113 · see citing works
Maximov, A., Shin, O., Liu, X., & Südhof, T. C. (2006) · The Journal of Cell Biology · doi:10.1083/jcb.200607021 · Cited by 112 · see citing works
Dickerson, L. W., Bonthius, D. J., Schutte, B. C., Yang, B., Barna, T. J., Bailey, M. C., Nehrke, K. W., Williamson, R. A., & Lamb, F. S. (2002) · Brain Research · doi:10.1016/s0006-8993(02)03519-9 · Cited by 105 · see citing works
Discharge of the Readily Releasable Pool With Action Potentials at Hippocampal Synapses
Stevens, C. F., & Williams, J. H. (2007) · Journal of Neurophysiology · doi:10.1152/jn.00857.2007 · Cited by 92 · see citing works
Ogura, T., Furukawa, T., Toyozaki, T., Yamada, K., Zheng, Y., Katayama, Y., Nakaya, H., & Inagaki, N. (2002) · The FASEB Journal · doi:10.1096/fj.01-0845fje · Cited by 92 · see citing works
Akabas, M. H., Cohen, F., & Finkelstein, A. (1984) · The Journal of Cell Biology · doi:10.1083/jcb.98.3.1063 · Cited by 87 · see citing works
Guzman, R. E., Grieschat, M., Fahlke, C., & Alekov, A. K. (2013) · ACS Chemical Neuroscience · doi:10.1021/cn400032z · Cited by 84 · see citing works
Self-citationCLC-3 Channels Modulate Excitatory Synaptic Transmission in Hippocampal Neurons
Wang, X. Q., Deriy, L. V., Foss, S., Huang, P., Lamb, F. S., Kaetzel, M. A., Bindokas, V. P., Marks, J. D., & Nelson, D. J. (2006) · Neuron · doi:10.1016/j.neuron.2006.08.035 · Cited by 79 · see citing works
Synapse-Specific Regulation of AMPA Receptor Subunit Composition by Activity
Harms, K. J., Tovar, K. R., & Craig, A. M. (2005) · Journal of Neuroscience · doi:10.1523/jneurosci.0302-05.2005 · Cited by 76 · see citing works
How Does a Vesicle Know It Is Full?
Williams, J. H. (1997) · Neuron · doi:10.1016/s0896-6273(00)80308-6 · Cited by 59 · see citing works
Guzman, R. E., Schwarz, Y. N., Rettig, J., & Bruns, D. (2010) · Journal of Neuroscience · doi:10.1523/jneurosci.1551-10.2010 · Cited by 46 · see citing works
Self-citationCLC‐3 chloride channels moderate long‐term potentiation at Schaffer collateral–CA1 synapses
Farmer, L. M., Le, B. N., & Nelson, D. J. (2012) · The Journal of Physiology · doi:10.1113/jphysiol.2012.243485 · Cited by 21 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Gene expression elucidates functional impact of polygenic risk for schizophrenia
Fromer, M., Roussos, P., Sieberts, S. K., Johnson, J. S., Kavanagh, D. H., Perumal, T. M., Ruderfer, D. M., Oh, E. C., Topol, A., Shah, H. R., et al. (2016) · Nature Neuroscience · doi:10.1038/nn.4399 · Cited by 1,091 · see citing works
CLC Chloride Channels and Transporters: Structure, Function, Physiology, and Disease
Jentsch, T. J., & Pusch, M. (2018) · Physiological Reviews · doi:10.1152/physrev.00047.2017 · Cited by 452 · see citing works
The NMDA receptor ‘glycine modulatory site’ in schizophrenia: d-serine, glycine, and beyond
Balu, D. T., & Coyle, J. T. (2015) · Current Opinion in Pharmacology · doi:10.1016/j.coph.2014.12.004 · Cited by 208 · see citing works
Poroca, D. R., Pelis, R. M., & Chappe, V. M. (2017) · Frontiers in Pharmacology · doi:10.3389/fphar.2017.00151 · Cited by 111 · see citing works
Discovery of CLC transport proteins: cloning, structure, function and pathophysiology
Jentsch, T. J. (2015) · The Journal of Physiology · doi:10.1113/jp270043 · Cited by 109 · see citing works
Martineau, M., Guzman, R. E., Fahlke, C. M., & Klingauf, J. (2017) · Nature Communications · doi:10.1038/s41467-017-02367-6 · Cited by 87 · see citing works
Self-citationFullard, J. F., Giambartolomei, C., Hauberg, M. E., Xu, K., Voloudakis, G., Shao, Z., Bare, C., Dudley, J. T., Mattheisen, M., Robakis, N. K. R. K., et al. (2017) · Human Molecular Genetics · doi:10.1093/hmg/ddx103 · Cited by 75 · see citing works
Hall, L. S., Medway, C. W., Pain, O., Pardiñas, A. F., Rees, E., Escott‐Price, V., Pocklington, A. J., Bray, N. J., Holmans, P., Walters, J., et al. (2019) · Human Molecular Genetics · doi:10.1093/hmg/ddz253 · Cited by 71 · see citing works
Guzman, R. E., Miranda‐Laferte, E., Franzen, A., & Fahlke, C. M. (2015) · Journal of Biological Chemistry · doi:10.1074/jbc.m115.668186 · Cited by 59 · see citing works
Self-citationNeurodegeneration Upon Dysfunction of Endosomal/Lysosomal CLC Chloride Transporters
Bose, S., He, H., & Stauber, T. (2021) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2021.639231 · Cited by 48 · see citing works
Uncoupling endosomal CLC chloride/proton exchange causes severe neurodegeneration
Weinert, S., Gimber, N., Deuschel, D. A., Stuhlmann, T., Puchkov, D., Farsi, Z., Ludwig, C. F., Novarino, G., López‐Cayuqueo, K. I., Planells‐Cases, R., et al. (2020) · The EMBO Journal · doi:10.15252/embj.2019103358 · Cited by 48 · see citing works
Presynaptic Molecular Determinants of Quantal Size
Takamori, S. (2016) · Frontiers in Synaptic Neuroscience · doi:10.3389/fnsyn.2016.00002 · Cited by 45 · see citing works
Sakai, A., & Suzuki, H. (2015) · Advances in experimental medicine and biology · doi:10.1007/978-3-319-22671-2_3 · Cited by 45 · see citing works
Dai, Z., Chu, H., Ma, J., Yan, Y., Zhang, X., & Liang, Y. (2018) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2018.00080 · Cited by 44 · see citing works
Vesicular glutamate transporters are H+-anion exchangers that operate at variable stoichiometry
Kolen, B., Borghans, B., Kortzak, D., Lugo, V., Hannack, C., Guzman, R. E., Ullah, G., & Fahlke, C. M. (2023) · Nature Communications · doi:10.1038/s41467-023-38340-9 · Cited by 36 · see citing works
Self-citationPreferential association with ClC-3 permits sorting of ClC-4 into endosomal compartments
Guzman, R. E., Bungert‐Plümke, S., Franzen, A., & Fahlke, C. M. (2017) · Journal of Biological Chemistry · doi:10.1074/jbc.m117.801951 · Cited by 31 · see citing works
Self-citationBeckers, A., Adis, C., Schuster-Gossler, K., Tveriakhina, L., Ott, T., Fuhl, F., Hegermann, J., Boldt, K., Serth, K., Rachev, E., et al. (2020) · Development · doi:10.1242/dev.188052 · Cited by 29 · see citing works
Self-citationTranslating Human Genetics into Novel Treatment Targets for Schizophrenia
Schubert, C. R., Xi, H. S., Wendland, J. R., & O’Donnell, P. (2014) · Neuron · doi:10.1016/j.neuron.2014.10.037 · Cited by 27 · see citing works
The Endo-lysosomal System in Parkinson’s Disease: Expanding the Horizon
Muraleedharan, A., & Vanderperre, B. (2023) · Journal of Molecular Biology · doi:10.1016/j.jmb.2023.168140 · Cited by 27 · see citing works
Rohrbough, J. C., Nguyen, H. N., & Lamb, F. S. (2018) · The Journal of Physiology · doi:10.1113/jp276332 · Cited by 24 · see citing works
Fan, F., Liu, T., Wang, X., Ren, D., Liu, H., Zhang, P., Wang, Z., Liu, N., Li, Q., Tu, Y., et al. (2016) · Journal of Diabetes Research · doi:10.1155/2016/2984380 · Cited by 23 · see citing works
Rampino, A., Taurisano, P., Fanelli, G., Attrotto, M., Torretta, S., Antonucci, L. A., Miccolis, G., Pergola, G., Ursini, G., Maddalena, G., et al. (2017) · European Neuropsychopharmacology · doi:10.1016/j.euroneuro.2017.06.005 · Cited by 20 · see citing works
Korologou‐Linden, R., Leyden, G. M., Relton, C. L., Richmond, R. C., & Richardson, T. G. (2021) · Human Molecular Genetics · doi:10.1093/hmg/ddab016 · Cited by 22 · see citing works
Expression of plasma membrane calcium ATPases confers Ca2+/H+ exchange in rodent synaptic vesicles
Ono, Y., Mori, Y., Egashira, Y., Sumiyama, K., & Takamori, S. (2019) · Scientific Reports · doi:10.1038/s41598-019-40557-y · Cited by 22 · see citing works
Choi, J.-H., Horowitz, L. B., & Ringstad, N. (2021) · Nature Communications · doi:10.1038/s41467-021-26575-3 · Cited by 15 · see citing works
Knockdown of CLC-3 in the hippocampal CA1 impairs contextual fear memory
Chen, Y.-F., Chen, Z.-X., Wang, R., Shi, Y., Li, X., Wang, X., & Zhao, H. (2018) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/j.pnpbp.2018.07.004 · Cited by 12 · see citing works
Santarriaga, S., Gerlovin, K., Layadi, Y., & Karmacharya, R. (2023) · Schizophrenia Research · doi:10.1016/j.schres.2023.02.029 · Cited by 7 · see citing works
Discovery of CLC transport proteins: cloning, structure, function and pathophysiology
Jentsch, T. J. (2015) · The Journal of Physiology · doi:10.1113/jphysiol.2014.270043 · Cited by 7 · see citing works
Vesicular glutamate transporters as anion channels?
Takamori, S. (2015) · Pflügers Archiv - European Journal of Physiology · doi:10.1007/s00424-015-1760-y · Cited by 6 · see citing works
A large‐scale evolutionary and structural analysis of <scp>CLC</scp> channels and transporters
Mishra, A., Díaz Vázquez, G., & Robertson, J. L. (2025) · Protein Science · doi:10.1002/pro.70389 · Cited by 3 · see citing works
“These proteins play vital physiological roles governing the excitability of muscle and neurons (Bennetts et al., 2005; Guzman et al., 2014), acidification of lysosomes and bones (Kornak et al., 2001; Zifarelli, 2022), and acid resistance in certain bacteria (Gut et al., 2006).”
TMEM16 Ca2+ Activated Cl– Channels and CLC Chloride Channels and Transporters
Boccaccio, A., & Pusch, M. (2018) · Oxford University Press eBooks · doi:10.1093/oxfordhb/9780190669164.013.17 · Cited by 3 · see citing works
The nonexcitable smooth muscle: remodeling the smooth muscle ion transport toolkit in disease
Johnson, M. T., & Trebak, M. (2026) · Physiological Reviews · doi:10.1152/physrev.00031.2025 · Cited by 3 · see citing works
Experience with the Ketogenic Diet in a Boy with CLCN4 Related Neurodevelopmental Disorder
Sağer, G., Yükselmiş, U., Güzel, O., Türkyılmaz, A., & Akçay, M. (2023) · Balkan Journal of Medical Genetics · doi:10.2478/bjmg-2023-0013 · Cited by 2 · see citing works
ClC-3-depedent polarization of microglia protects against cerebral ischemic injury in mice
Wang, M., Wang, B., Xu, Y., Zhang, Q., Wang, X., & Dong, Y. (2025) · International Immunopharmacology · doi:10.1016/j.intimp.2025.114618 · Cited by 1 · see citing works
Membrane insertion of chromogranin B for granule maturation in regulated secretionPreprint
Yadav, G. P., Wang, H., Ouwendijk, J., Annamalai, M., Cross, S., Wang, Q., Hagan, D. W., Mathews, C. E., Phelps, E. A., Verkade, P., et al. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2019.12.28.890053 · Cited by 1 · see citing works
Passier, R. C. (2017) · Acta Physiologica · doi:10.1111/apha.12866
- Authors
- Guzman, R. E., Alekov, A. K., Filippov, M., Hegermann, J., & Fahlke, C.
- Affiliations
- Forschungszentrum Jülich (DE)
- Medizinische Hochschule Hannover (DE)
- Corresponding author
- Guzman, Raul E.
- Fahlke, Christoph
- Venue
- Frontiers in Cellular Neuroscience
- Publisher
- Frontiers Media SA
- Published
- 2014-05-23
- Volume
- 8
- Pages
- 143-143
- ISSN
- 1662-5102 (ISSN-L)
- PMC
- PMC4033211
- OpenAlex
- W2138127477
- Cited by
- 38
- References
- 35
- Citations by year
- 2026: 1 · 2025: 2 · 2023: 4 · 2021: 4 · 2020: 2 · 2019: 3 · 2018: 6 · 2017: 6 · 2016: 3 · 2015: 5 · 2014: 2
- FWCI
- 2.42
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- cc-by
- Locations
- Frontiers in Cellular Neuroscience (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Topics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ion channel regulation and function
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Keywords
- ClC-3, glutamatergic neurotransmission, hippocampal neurons, synaptic vesicles, glutamate release, miniature EPSCs, paired-pulse ratio, release probability, neurodegeneration, AMPA receptors, NMDA receptor
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review