First proposal of minimum information about a cellular assay for regenerative medicine
Open accessAbstract
Advances in stem cell research have triggered scores of studies in regenerative medicine in a large number of institutions and companies around the world. However, reproducibility and data exchange among laboratories or cell banks are constrained by the lack of a standardized format for experiments. To enhance information flow in stem cell and derivative cell research, here we propose a minimum information standard to describe cellular assay data to facilitate practical regenerative medicine. Based on the existing Minimum Information About a Cellular Assay, we developed Minimum Information About a Cellular Assay for Regenerative Medicine (MIACARM), which allows for the description of advanced cellular experiments with defined taxonomy of human cell types. By using controlled terms, such as ontologies, MIACARM will provide a platform for cellular assay data exchange among cell banks or registries that have been established at more than 20 sites in the world. Significance: Currently, there are more than 20 human cell information storage sites around the world. However, reproducibility and data exchange among different laboratories or cell information providers are usually inadequate or nonexistent because of the lack of a standardized format for experiments. This study, which is the fruit of collaborative work by scientists at stem cell banks and cellular information registries worldwide, including those in the U.S., the U.K., Europe, and Japan, proposes new minimum information guidelines, Minimum Information About a Cellular Assay for Regenerative Medicine (MIACARM), for cellular assay data deposition. MIACARM is intended to promote data exchange and facilitation of practical regenerative medicine.
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MIACA and MIACARE checklists help standardize field names and establish controlled vocabularies for species, tissue of origin, culture medium, and STR kit version.
“The Minimum Information About a Cellular Assay (MIACA) and the Minimum Information About a Cellular Assay in Regenerative Medicine (MIACARE) checklists help to standardize field names (e.g., “passage_number” vs. “passageNo”) and establish controlled vocabularies for species, tissue of origin, culture medium, and STR kit version [113,114].”
From Genetic Insights into the Economic Toll of Cell Line Misidentification: A Comprehensive Review (2026) · cites this paper as [114]
The Introduction and Materials and Methods (Ontology Assignment; page numbers unavailable) support the general point that these reporting guidelines standardize assay information and that controlled terms were assigned to the regenerative-medicine checklist. But the paper calls that checklist MIACARM, not MIACARE, and does not establish the claimed field-name example or controlled vocabularies for each listed field, including STR kit version. (LLM, conf=0.86)
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- Authors
- Sakurai, K., Kurtz, A., Stacey, G., Sheldon, M., & Fujibuchi, W.
- Affiliations
- Kyoto University (JP)
- Charité-Universitätsmedizin Berlin, Berlin-Brandenburg Center for Regenerative Therapies, Berlin, Germany
- Medicines and Healthcare products Regulatory Agency (GB)
- Rutgers, The State University of New Jersey (US)
- Corresponding author
- Fujibuchi, Wataru
- Venue
- Stem Cells Translational Medicine
- Publisher
- Oxford University Press (OUP)
- Published
- 2016-07-12
- Volume
- 5
- Issue
- 10
- Pages
- 1345-1361
- ISSN
- 2157-6564 (ISSN-L)
- 2157-6580
- PMC
- PMC5031183
- OpenAlex
- W2475159815
- Cited by
- 31
- References
- 50
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 2 · 2023: 8 · 2022: 2 · 2021: 7 · 2020: 5 · 2019: 1 · 2018: 2 · 2017: 2
- FWCI
- 3.72
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model (vor)
- Locations
- Stem Cells Translational Medicine (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Institutional Repositories DataBase (IRDB) (submittedVersion)
- Kyoto University Research Information Repository (Kyoto University) (submittedVersion, cc-by)
- Funders
- National Institute of Mental Health (5U24MH068457-13)
- National Institute of Neurological Disorders and Stroke (1U24NS095914-01)
- Topics
- Physical Sciences › Computer Science › Information Systems › Research Data Management Practices
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Pluripotent Stem Cells Research
- Social Sciences › Decision Sciences › Information Systems and Management › Scientific Computing and Data Management
- Keywords
- data standardization, data exchange, reproducibility, stem cell banks, controlled vocabulary, ontology (information science), human cell types, regenerative medicine, data deposition
- MeSH terms
- Humans, Registries, Stem Cells, Tissue Banks, Regenerative Medicine, Stem Cell Research
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