Autophagic cell death is dependent on lysosomal membrane permeability through bax and bak
Open accessAbstract
Cells deficient in the pro-death Bcl-2 family members Bax and Bak are known to be resistant to apoptotic cell death, and previous we have shown that these two effectors are also needed for mitochondrial-dependent cellular necrosis (Karch et al., 2013). Here we show that mouse embryonic fibroblasts deficient in Bax/Bak1 are resistant to the third major form of cell death associated with autophagy through a mechanism involving lysosome permeability. Indeed, specifically targeting Bax only to the lysosome restores autophagic cell death in Bax/Bak1 null cells. Moreover, a monomeric-only mutant form of Bax is sufficient to increase lysosomal membrane permeability and restore autophagic cell death in Bax/Bak1 double-deleted mouse embryonic fibroblasts. Finally, increasing lysosomal permeability through a lysomotropic detergent in cells devoid of Bax/Bak1 restores autophagic cell death, collectively indicting that Bax/Bak integrate all major forms of cell death through direct effects on membrane permeability of multiple intracellular organelles.
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This led to the identification of some of the earliest disease-associated genes, including APP, PS1 and PS2 in AD, SNCA and LRRK2 in PD and MAPT and GRN in FTD.
“This subsequently led to the identification of some of the earliest disease-associated genes, including APP, PS1 and PS2 in AD, SNCA and LRRK2 in PD and MAPT and GRN in FTD.79–87”
From The lysosome and proteostatic stress at the intersection of pediatric neurological disorders and adult neurodegenerative diseases (2025) · cites this paper as [83]
The Results and Materials and methods passages concern Bax/Bak-mediated cell death, not the identification of genes associated with AD, PD, or FTD. Searches for APP, PS1, PS2, SNCA, LRRK2, MAPT, and GRN, and for the three diseases, found no passage addressing the claim. (LLM, conf=0.78)
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Classification of cell death: recommendations of the Nomenclature Committee on Cell Death 2009
Kroemer, G., Galluzzi, L., Vandenabeele, P., Abrams, J., Alnemri, E. S., Baehrecke, E. H., Blagosklonny, M. V., El-Deiry, W. S., Golstein, P., Green, D. R., et al. (2009) · Cell Death & Differentiation · doi:10.1038/cdd.2008.150 · Cited by 3,399 · see citing works
Karch, J., Kwong, J. Q., Burr, A. R., Sargent, M. A., Elrod, J. W., Peixoto, P. M., Martinez-Caballero, S., Osinska, H., Cheng, E. H.-Y., Robbins, J., et al. (2013) · eLife · doi:10.7554/elife.00772 · Cited by 290 · cited 9× · see citing works
“…Karch et al. This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited. needed for mitochondrial-dependent cellular necrosis (Karch et al., 2013).”
InfluentialSelf-citationOberle, C., Huai, J., Reinheckel, T., Tacke, M., Rassner, M., Ekert, P. G., Buellesbach, J., & Borner, C. (2010) · Cell Death & Differentiation · doi:10.1038/cdd.2009.214 · Cited by 193 · see citing works
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Research works printed but not linked: 28
- Aits S Jäättelä M 2013 Lysosomal cell death at a glance Journal of Cell Science 126 1905 1912 10.1242/jcs.091181 23720375 · DOI · Paper page
- Antonsson B Montessuit S Lauper S Eskes R Martinou JC 2000 Bax oligomerization is required for channel-forming activity in liposomes and to trigger cytochrome c release from mitochondria Biochemical Journal 345 Pt 2 271 278 10.1042/bj3450271 10620504 PMC1220756 · DOI
- Boya P Kroemer G 2008 Lysosomal membrane permeabilization in cell death Oncogene 27 6434 6451 10.1038/onc.2008.310 18955971 · DOI
- Dejean LM Martinez-Caballero S Guo L Hughes C Teijido O Ducret T Ichas F Korsmeyer SJ Antonsson B Jonas EA Kinnally KW 2005 Oligomeric Bax is a component of the putative cytochrome c release channel MAC, mitochondrial apoptosis-induced channel Molecular Biology of the Cell 16 2424 2432 10.1091/mbc.E04-12-1111 15772159 PMC1087246 · DOI
- Feldstein AE Werneburg NW Li Z Bronk SF Gores GJ 2006 Bax inhibition protects against free fatty acid-induced lysosomal permeabilization AJP: Gastrointestinal and Liver Physiology 290 G1339 G1346 10.1152/ajpgi.00509.2005 16484678 PMC3056273 · DOI · Paper page
- Gozuacik D Kimchi A 2007 Autophagy and cell death Current topics in developmental biology 78 217 245 10.1016/S0070-2153(06)78006-1 17338918 · DOI
- Hoppins S Edlich F Cleland MM Banerjee S McCaffery JM Youle RJ Nunnari J 2011 The soluble form of Bax regulates mitochondrial fusion via MFN2 homotypic complexes Molecular Cell 41 150 160 10.1016/j.molcel.2010.11.030 21255726 PMC3072068 · DOI
- Johansson AC Appelqvist H Nilsson C Kågedal K Roberg K Ollinger K 2010 Regulation of apoptosis-associated lysosomal membrane permeabilization Apoptosis 15 527 540 10.1007/s10495-009-0452-5 20077016 PMC2850995 · DOI
- Karch J Kanisicak O Brody MJ Sargent MA Michael DM Molkentin JD 2015 Necroptosis interfaces with MOMP and the MPTP in mediating cell death PLoS One 10 e0130520 10.1371/journal.pone.0130520 26061004 PMC4465034 · DOI
- Karch J Molkentin JD 2015 Regulated necrotic cell death: the passive aggressive side of Bax and Bak Circulation Research 116 1800 1809 10.1161/CIRCRESAHA.116.305421 25999420 PMC4443748 · DOI
- Kågedal K Johansson AC Johansson U Heimlich G Roberg K Wang NS Jürgensmeier JM Ollinger K 2005 Lysosomal membrane permeabilization during apoptosis--involvement of Bax? International Journal of Experimental Pathology 86 309 321 10.1111/j.0959-9673.2005.00442.x 16191103 PMC2517437 · DOI
- Kim H Tu HC Ren D Takeuchi O Jeffers JR Zambetti GP Hsieh JJ Cheng EH 2009 Stepwise activation of BAX and BAK by tBID, BIM, and PUMA initiates mitochondrial apoptosis Molecular Cell 36 487 499 10.1016/j.molcel.2009.09.030 19917256 PMC3163439 · DOI · Paper page
- Koike M Shibata M Tadakoshi M Gotoh K Komatsu M Waguri S Kawahara N Kuida K Nagata S Kominami E Tanaka K Uchiyama Y 2008 Inhibition of autophagy prevents hippocampal pyramidal neuron death after hypoxic-ischemic injury The American Journal of Pathology 172 454 469 10.2353/ajpath.2008.070876 18187572 PMC2312361 · DOI · Paper page
- Korsmeyer SJ Wei MC Saito M Weiler S Oh KJ Schlesinger PH 2000 Pro-apoptotic cascade activates BID, which oligomerizes BAK or BAX into pores that result in the release of cytochrome c Cell Death and Differentiation 7 1166 1173 10.1038/sj.cdd.4400783 11175253 · DOI
- Kroemer G Levine B 2008 Autophagic cell death: the story of a misnomer Nature Reviews Molecular Cell Biology 9 1004 1010 10.1038/nrm2529 18971948 PMC2727358 · DOI · Paper page
- Lei X Chen Y Du G Yu W Wang X Qu H Xia B He H Mao J Zong W Liao X Mehrpour M Hao X Chen Q 2006 Gossypol induces Bax/Bak-independent activation of apoptosis and cytochrome c release via a conformational change in Bcl-2 The FASEB Journal 20 2147 2149 10.1096/fj.05-5665fje 16935937 · DOI
- Li W Yuan X Nordgren G Dalen H Dubowchik GM Firestone RA Brunk UT 2000 Induction of cell death by the lysosomotropic detergent MSDH FEBS Letters 470 35 39 10.1016/S0014-5793(00)01286-2 10722841 · DOI
- Matsui Y Takagi H Qu X Abdellatif M Sakoda H Asano T Levine B Sadoshima J 2007 Distinct roles of autophagy in the heart during ischemia and reperfusion: roles of AMP-activated protein kinase and Beclin 1 in mediating autophagy Circulation Research 100 914 922 10.1161/01.RES.0000261924.76669.36 17332429 · DOI · Paper page
- Muller S Brun S René F de Sèze J Loeffler JP Jeltsch-David H 2017 Autophagy in neuroinflammatory diseases Autoimmunity Reviews 16 856 874 10.1016/j.autrev.2017.05.015 28572049 · DOI
- Rubinsztein DC Mariño G Kroemer G 2011 Autophagy and aging Cell 146 682 695 10.1016/j.cell.2011.07.030 21884931 · DOI · Paper page
- Schweichel JU Merker HJ 1973 The morphology of various types of cell death in prenatal tissues Teratology 7 253 266 10.1002/tera.1420070306 4807128 · DOI · Paper page
- Shimizu S Narita M Tsujimoto Y 1999 Bcl-2 family proteins regulate the release of apoptogenic cytochrome c by the mitochondrial channel VDAC Nature 399 483 487 10.1038/20959 10365962 · DOI · Paper page
- Shu X Lev-Ram V Deerinck TJ Qi Y Ramko EB Davidson MW Jin Y Ellisman MH Tsien RY 2011a A genetically encoded tag for correlated light and electron microscopy of intact cells, tissues, and organisms PLoS Biology 9 e1001041 10.1371/journal.pbio.1001041 21483721 PMC3071375 · DOI
- Shu X Lev-Ram V Deerinck TJ Qi Y Ramko EB Davidson MW Jin Y Ellisman MH Tsien RY 2011b A genetically encoded tag for correlated light and electron microscopy of intact cells, tissues, and organisms PLoS Biology 9 e1001041 10.1371/journal.pbio.1001041 21483721 PMC3071375 · DOI
- van Delft MF Wei AH Mason KD Vandenberg CJ Chen L Czabotar PE Willis SN Scott CL Day CL Cory S Adams JM Roberts AW Huang DC 2006 The BH3 mimetic ABT-737 targets selective Bcl-2 proteins and efficiently induces apoptosis via Bak/Bax if Mcl-1 is neutralized Cancer Cell 10 389 399 10.1016/j.ccr.2006.08.027 17097561 PMC2953559 · DOI
- Wei MC Zong WX Cheng EH Lindsten T Panoutsakopoulou V Ross AJ Roth KA MacGregor GR Thompson CB Korsmeyer SJ 2001 Proapoptotic BAX and BAK: a requisite gateway to mitochondrial dysfunction and death Science 292 727 730 10.1126/science.1059108 11326099 PMC3049805 · DOI · Paper page
- Wubbolts R Fernandez-Borja M Oomen L Verwoerd D Janssen H Calafat J Tulp A Dusseljee S Neefjes J 1996 Direct vesicular transport of MHC class II molecules from lysosomal structures to the cell surface The Journal of Cell Biology 135 611 622 10.1083/jcb.135.3.611 8909537 PMC2121075 · DOI
- Zhu H Tannous P Johnstone JL Kong Y Shelton JM Richardson JA Le V Levine B Rothermel BA Hill JA 2007 Cardiac autophagy is a maladaptive response to hemodynamic stress Journal of Clinical Investigation 117 1782 1793 10.1172/JCI27523 17607355 PMC1890995 · DOI
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Levine, B., & Kroemer, G. (2019) · Cell · doi:10.1016/j.cell.2018.09.048 · Cited by 2,832 · see citing works
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Denton, D., & Kumar, S. (2019) · Cell Death & Differentiation · doi:10.1038/s41418-018-0252-y · Cited by 777 · see citing works
Roca, F. J., Whitworth, L. J., Redmond, S., Jones, A. A., & Ramakrishnan, L. (2019) · Cell · doi:10.1016/j.cell.2019.08.004 · Cited by 233 · see citing works
Lane-Donovan, C., Paredes, M., & Kao, A. W. (2025) · Progress in Neurobiology · doi:10.1016/j.pneurobio.2025.102854 · Cited by 3 · see citing works
- Authors
- Karch, J., Schips, T. G., Maliken, B. D., Brody, M. J., Sargent, M. A., Kanisicak, O., & Molkentin, J. D.
- Affiliations
- Cincinnati Children's Hospital Medical Center (US)
- Corresponding author
- Molkentin, Jeffery D
- ORCID
- Venue
- eLife
- Publisher
- eLife Sciences Publications, Ltd
- Published
- 2017-11-17
- Volume
- 6
- ISSN
- 2050-084X (ISSN-L)
- PMC
- PMC5697932
- OpenAlex
- W2768129277
- Cited by
- 91
- References
- 3
- Citations by year
- 2026: 4 · 2025: 10 · 2024: 5 · 2023: 6 · 2022: 17 · 2021: 14 · 2020: 15 · 2019: 7 · 2018: 13
- FWCI
- 7.50
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- eLife (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Funders
- Howard Hughes Medical Institute (Molkentin)
- National Institutes of Health (R01HL132831)
- Topics
- Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Cell death mechanisms and regulation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Physiology › Calcium signaling and nucleotide metabolism
- Keywords
- autophagic cell death, lysosomal membrane permeability, Bax, Bak, Bcl-2 family proteins, lysosomes, mouse embryonic fibroblasts, cell death regulation
- MeSH terms
- Animals, Autophagy, Cell Membrane, Cells, Cultured, Fibroblasts, Lysosomes, Permeability, Gene Deletion, bcl-2 Homologous Antagonist-Killer Protein, bcl-2-Associated X Protein, Mice
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