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SNAP25 disease mutations change the energy landscape for synaptic exocytosis due to aberrant SNARE interactions
Open accessPreprint — published as 10.7554/elife.88619.3
Abstract
Abstract SNAP25 is one of three neuronal SNAREs driving synaptic vesicle exocytosis. We studied three mutations in SNAP25 that cause epileptic encephalopathy: V48F, and D166Y in the Synaptotagmin-1 (Syt1) binding interface, and I67N, which destabilizes the SNARE-complex. All three mutations reduced Syt1-dependent vesicle docking to SNARE-carrying liposomes and Ca2+-stimulated membrane fusion in vitro and in neurons. The V48F and D166Y mutants (with potency D166Y > V48F) led to reduced Readily Releasable Pool (RRP) size, due to increased spontaneous (mEPSC) release and decreased priming rates. These mutations lowered the energy barrier for fusion and increased the release probability, which are gain-of-function features not found in Syt1 knockout (KO) neurons; normalized mEPSC release rates were higher (potency D166Y>V48F) than in the Syt1 KO. These mutations (potency D166Y > V48F) increased spontaneous association to partner SNAREs, resulting in unregulated membrane fusion. In contrast, the I67N mutant decreased mEPSC frequency and evoked EPSC amplitudes due to an increase in the apparent height of the energy barrier for fusion, whereas the RRP size was unaffected. This could be partly compensated by positive charges lowering the energy barrier. Overall, pathogenic mutations in SNAP25 cause complex changes in the energy landscape for priming and fusion.
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Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
High Rate of Recurrent De Novo Mutations in Developmental and Epileptic Encephalopathies
Hamdan, F. F., Myers, C. T., Cossette, P., Lemay, P., Spiegelman, D., Laporte, A. D., Nassif, C., Diallo, O., Monlong, J., Cadieux-Dion, M., et al. (2017) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2017.09.008 · Cited by 445
Architecture of the synaptotagmin–SNARE machinery for neuronal exocytosis
Zhou, Q., Lai, Y., Bacaj, T., Zhao, M., Lyubimov, A. Y., Uervirojnangkoorn, M., Zeldin, O. B., Brewster, A. S., Sauter, N. K., Cohen, A. E., et al. (2015) · Nature · doi:10.1038/nature14975 · Cited by 348
Quantitative analysis of the native presynaptic cytomatrix by cryoelectron tomography
Fernández-Busnadiego, R., Zuber, B., Maurer, U. E., Cyrklaff, M., Baumeister, W., & Lučić, V. (2010) · Journal of Cell Biology · doi:10.1083/jcb.200908082 · Cited by 267
Taschenberger, H., Woehler, A., & Neher, E. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1606383113 · Cited by 128
De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy
Klöckner, C., Sticht, H., Zacher, P., Popp, B., Babcock, H. E., Bakker, D. P., Barwick, K., Bonfert, M. V., Bönnemann, C. G., Brilstra, E. H., et al. (2021) · Genetics in Medicine · doi:10.1038/s41436-020-01020-w · Cited by 47
Flagged first, then by citations
Research works printed but not linked: 95
- 2015, GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers, SoftwareX, 1–2, 19
- 2021a, STXBP1 encephalopathies: Clinical spectrum, disease mechanisms, and therapeutic strategies, J Neurochem, 157, 165, 10.1111/jnc.15120 · DOI
- 2021b, Targeted stabilization of Munc18-1 function via pharmacological chaperones, EMBO Mol Med, 13, e12354
- 2021, Role of Aberrant Spontaneous Neurotransmission in SNAP25-Associated Encephalopathies, Neuron, 109, 59, 10.1016/j.neuron.2020.10.012 · DOI
- 2015, Synaptotagmin-1 and -7 Are Redundantly Essential for Maintaining the Capacity of the Readily-Releasable Pool of Synaptic Vesicles, PLoS Biol, 13, e1002267, 10.1371/journal.pbio.1002267 · DOI
- G. Broad Center for Mendelian, 2018, SYT1-associated neurodevelopmental disorder: a case series, Brain, 141, 2576, 10.1093/brain/awy209 · DOI
- 2015, A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly, Science, 349, 1111, 10.1126/science.aac7906 · DOI
- 2018, Dynamics and number of trans-SNARE complexes determine nascent fusion pore properties, Nature, 554, 260, 10.1038/nature25481 · DOI
- 2007, Munc13-1 C1 domain activation lowers the energy barrier for synaptic vesicle fusion, J Neurosci, 27, 1200, 10.1523/JNEUROSCI.4908-06.2007 · DOI
- 1991, Excitatory and inhibitory autaptic currents in isolated hippocampal neurons maintained in cell culture, Proc Natl Acad Sci U S A, 88, 7834, 10.1073/pnas.88.17.7834 · DOI
- 2022, Deconstructing Synaptotagmin-1’s Distinct Roles in Synaptic Vesicle Priming and Neurotransmitter Release, J Neurosci, 42, 2856, 10.1523/JNEUROSCI.1945-21.2022 · DOI
- 2020, Molecular Basis for Synaptotagmin-1-Associated Neurodevelopmental Disorder, Neuron, 107, 52, 10.1016/j.neuron.2020.04.003 · DOI
- 2007, Differential effects of SNAP-25 deletion on Ca2+ -dependent and Ca2+ -independent neurotransmission, J Neurophysiol, 98, 794, 10.1152/jn.00226.2007 · DOI
- 2018, Synaptotagmin-1 drives synchronous Ca(2+)-triggered fusion by C2B-domain-mediated synaptic-vesicle-membrane attachment, Nat Neurosci, 21, 33, 10.1038/s41593-017-0037-5 · DOI
- 2020, Stxbp1/Munc18-1 haploinsufficiency impairs inhibition and mediates key neurological features of STXBP1 encephalopathy, Elife, 9
- 2021, Synaptotagmin-1 interacts with PI(4,5)P2 to initiate synaptic vesicle docking in hippocampal neurons, Cell Rep, 34, 108842, 10.1016/j.celrep.2021.108842 · DOI
- 2021, Synaptotagmin 1 oligomerization via the juxtamembrane linker regulates spontaneous and evoked neurotransmitter release, Proc Natl Acad Sci U S A, 118
- 2019, Synaptotagmin 1 clamps synaptic vesicle fusion in mammalian neurons independent of complexin, Nat Commun, 10, 4076, 10.1038/s41467-019-12015-w · DOI
- 1993, Particle Mesh Ewald - an N.Log(N) Method for Ewald Sums in Large Systems, J Chem Phys, 98, 10089, 10.1063/1.464397 · DOI
- 2020, Resolving kinetic intermediates during the regulated assembly and disassembly of fusion pores, Nat Commun, 11, 231, 10.1038/s41467-019-14072-7 · DOI
- 1999, Peptide folding: When simulation meets experiment, Angew Chem Int Edit, 38, 236, 10.1002/(SICI)1521-3773(19990115)38:1/2<236::AID-ANIE236>3.0.CO;2-M · DOI
- 2007, Differential abilities of SNAP-25 homologs to support neuronal function, J Neurosci, 27, 9380, 10.1523/JNEUROSCI.5092-06.2007 · DOI
- 2023, Microcircuit failure in STXBP1 encephalopathy leads to hyperexcitability, BioRxiv
- 1985, The Nose-Hoover Thermostat, J Chem Phys, 83, 4069, 10.1063/1.449071 · DOI
- 2015, Positively charged amino acids at the SNAP-25 C terminus determine fusion rates, fusion pore properties, and energetics of tight SNARE complex zippering, J Neurosci, 35, 3230, 10.1523/JNEUROSCI.2905-14.2015 · DOI
- 1997, A structural change occurs upon binding of syntaxin to SNAP-25, J Biol Chem, 272, 4582, 10.1074/jbc.272.7.4582 · DOI
- 1998, Conserved structural features of the synaptic fusion complex: SNARE proteins reclassified as Q- and R-SNAREs, Proc Natl Acad Sci U S A, 95, 15781, 10.1073/pnas.95.26.15781 · DOI
- 2012, Single reconstituted neuronal SNARE complexes zipper in three distinct stages, Science, 337, 1340, 10.1126/science.1224492 · DOI
- 2018, Mechanism-based rescue of Munc18-1 dysfunction in varied encephalopathies by chemical chaperones, Nat Commun, 9, 3986, 10.1038/s41467-018-06507-4 · DOI
- 2019, Cell-Specific Loss of SNAP25 from Cortical Projection Neurons Allows Normal Development but Causes Subsequent Neurodegeneration, Cereb Cortex, 29, 2148, 10.1093/cercor/bhy127 · DOI
- 2013, Phosphatidylinositol 4,5-bisphosphate clusters act as molecular beacons for vesicle recruitment, Nat Struct Mol Biol, 20, 679, 10.1038/nsmb.2570 · DOI
- 2017, CHARMM36m: an improved force field for folded and intrinsically disordered proteins, Nat Methods, 14, 71, 10.1038/nmeth.4067 · DOI
- 2020, Post-tetanic potentiation lowers the energy barrier for synaptic vesicle fusion independently of Synaptotagmin-1, Elife, 9
- 2017, An activated Q-SNARE/SM protein complex as a possible intermediate in SNARE assembly, EMBO J, 36, 1788, 10.15252/embj.201696270 · DOI
- 2018, Munc18-1 catalyzes neuronal SNARE assembly by templating SNARE association, Elife, 7
- 2021, Munc13 binds and recruits SNAP25 to chaperone SNARE complex assembly, FEBS Lett, 595, 297, 10.1002/1873-3468.14006 · DOI
- 2015, A Post-Docking Role of Synaptotagmin 1-C2B Domain Bottom Residues R398/399 in Mouse Chromaffin Cells, J Neurosci, 35, 14172, 10.1523/JNEUROSCI.1911-15.2015 · DOI
- 2012, Solution single-vesicle assay reveals PIP2-mediated sequential actions of synaptotagmin-1 on SNAREs, EMBO J, 31, 2144, 10.1038/emboj.2012.57 · DOI
- 2018, Protein instability, haploinsufficiency, and cortical hyper-excitability underlie STXBP1 encephalopathy, Brain, 141, 1350, 10.1093/brain/awy046 · DOI
- 2016, CHARMM-GUI Input Generator for NAMD, GROMACS, AMBER, OpenMM, and CHARMM/OpenMM Simulations Using the CHARMM36 Additive Force Field, J Chem Theory Comput, 12, 405, 10.1021/acs.jctc.5b00935 · DOI
- 2013, Superpriming of synaptic vesicles after their recruitment to the readily releasable pool, Proc Natl Acad Sci U S A, 110, 15079, 10.1073/pnas.1314427110 · DOI
- 2020, The Na, K-ATPase acts upstream of phosphoinositide PI(4,5)P(2) facilitating unconventional secretion of Fibroblast Growth Factor 2, Commun Biol, 3, 141, 10.1038/s42003-020-0871-y · DOI
- 2009, Autapses and networks of hippocampal neurons exhibit distinct synaptic transmission phenotypes in the absence of synaptotagmin I, J Neurosci, 29, 7395, 10.1523/JNEUROSCI.1341-09.2009 · DOI
- 2002, Calcium-independent stimulation of membrane fusion and SNAREpin formation by synaptotagmin I, J Cell Biol, 158, 273, 10.1083/jcb.200203135 · DOI
- 2020, Complexin Suppresses Spontaneous Exocytosis by Capturing the Membrane-Proximal Regions of VAMP2 and SNAP25, Cell Rep, 32, 107926, 10.1016/j.celrep.2020.107926 · DOI
- 2012, Complexin arrests a pool of docked vesicles for fast Ca2+-dependent release, EMBO J, 31, 3270, 10.1038/emboj.2012.164 · DOI
- 2019, SNARE machinery is optimized for ultrafast fusion, Proc Natl Acad Sci U S A, 116, 2435, 10.1073/pnas.1820394116 · DOI
- 2014, Increased polyubiquitination and proteasomal degradation of a Munc18-1 disease-linked mutant causes temperature-sensitive defect in exocytosis, Cell Rep, 9, 206, 10.1016/j.celrep.2014.08.059 · DOI
- 2022, ColabFold: making protein folding accessible to all, Nat Methods, 19, 679, 10.1038/s41592-022-01488-1 · DOI · Paper page
- 2010, Fast vesicle fusion in living cells requires at least three SNARE complexes, Science, 330, 502, 10.1126/science.1193134 · DOI
- 2005, Reluctant vesicles contribute to the total readily releasable pool in glutamatergic hippocampal neurons, J Neurosci, 25, 3842, 10.1523/JNEUROSCI.5231-04.2005 · DOI
- 1996, In vivo gene delivery and stable transduction of nondividing cells by a lentiviral vector, Science, 272, 263, 10.1126/science.272.5259.263 · DOI · Paper page
- 2015, Merits and Limitations of Vesicle Pool Models in View of Heterogeneous Populations of Synaptic Vesicles, Neuron, 87, 1131, 10.1016/j.neuron.2015.08.038 · DOI · Paper page
- 2012, SNAREpin assembly by Munc18-1 requires previous vesicle docking by synaptotagmin 1, J Biol Chem, 287, 31041, 10.1074/jbc.M112.386805 · DOI
- 1999, Rapid and efficient fusion of phospholipid vesicles by the alpha-helical core of a SNARE complex in the absence of an N-terminal regulatory domain, Proc Natl Acad Sci U S A, 96, 12565, 10.1073/pnas.96.22.12565 · DOI
- 1981, Polymorphic Transitions in Single-Crystals - a New Molecular-Dynamics Method, J Appl Phys, 52, 7182, 10.1063/1.328693 · DOI
- 2015, Analysis of conditional heterozygous STXBP1 mutations in human neurons, J Clin Invest, 125, 3560, 10.1172/JCI78612 · DOI
- 2013, Cytotoxicity of botulinum neurotoxins reveals a direct role of syntaxin 1 and SNAP-25 in neuron survival, Nat Commun, 4, 1472, 10.1038/ncomms2462 · DOI
- 2023, Morphofunctional changes at the active zone during synaptic vesicle exocytosis, EMBO Rep:e, 55719
- 2018, Two Disease-Causing SNAP-25B Mutations Selectively Impair SNARE C-terminal Assembly, J Mol Biol, 430, 479, 10.1016/j.jmb.2017.10.012 · DOI
- 2005, Augmenting neurotransmitter release by enhancing the apparent Ca2+ affinity of synaptotagmin 1, Proc Natl Acad Sci U S A, 102, 18664, 10.1073/pnas.0509153102 · DOI · Paper page
- 2022, Molecular Mechanisms Underlying Neurotransmitter Release, Annu Rev Biophys, 51, 377, 10.1146/annurev-biophys-111821-104732 · DOI
- 2013, Mutation in SNAP25 as a novel genetic cause of epilepsy and intellectual disability, Rare Dis, 1, e26314, 10.4161/rdis.26314 · DOI
- 1996, Definition of the readily releasable pool of vesicles at hippocampal synapses, Neuron, 16, 1197, 10.1016/S0896-6273(00)80146-4 · DOI
- 2019, An Electrostatic Energy Barrier for SNARE-Dependent Spontaneous and Evoked Synaptic Transmission, Cell Rep, 26, 2340, 10.1016/j.celrep.2019.01.103 · DOI
- 2008, De novo mutations in the gene encoding STXBP1 (MUNC18-1) cause early infantile epileptic encephalopathy, Nat Genet, 40, 782, 10.1038/ng.150 · DOI
- 2017, Early Golgi Abnormalities and Neurodegeneration upon Loss of Presynaptic Proteins Munc18-1, Syntaxin-1, or SNAP-25, J Neurosci, 37, 4525, 10.1523/JNEUROSCI.3352-16.2017 · DOI
- 2011, Automated analysis of neuronal morphology, synapse number and synaptic recruitment, J Neurosci Methods, 195, 185, 10.1016/j.jneumeth.2010.12.011 · DOI
- 2011, Resolving the function of distinct Munc18-1/SNARE protein interaction modes in a reconstituted membrane fusion assay, J Biol Chem, 286, 30582, 10.1074/jbc.M111.269886 · DOI
- 2015, Additive effects on the energy barrier for synaptic vesicle fusion cause supralinear effects on the vesicle fusion rate, Elife, 4, e05531, 10.7554/eLife.05531 · DOI
- 2016, Interactions Between SNAP-25 and Synaptotagmin-1 Are Involved in Vesicle Priming, Clamping Spontaneous and Stimulating Evoked Neurotransmission, J Neurosci, 36, 11865, 10.1523/JNEUROSCI.1011-16.2016 · DOI
- 2014, Mutant SNAP25B causes myasthenia, cortical hyperexcitability, ataxia, and intellectual disability, Neurology, 83, 2247, 10.1212/WNL.0000000000001079 · DOI
- 2012, SNARE proteins: one to fuse and three to keep the nascent fusion pore open, Science, 335, 1355, 10.1126/science.1214984 · DOI
- 2020, Munc13-1 MUN domain and Munc18-1 cooperatively chaperone SNARE assembly through a tetrameric complex, Proc Natl Acad Sci U S A, 117, 1036, 10.1073/pnas.1914361117 · DOI
- 2017, Autoinhibition of Munc18-1 modulates synaptobrevin binding and helps to enable Munc13-dependent regulation of membrane fusion, Elife, 6
- 2006, Sequential N- to C-terminal SNARE complex assembly drives priming and fusion of secretory vesicles, EMBO J, 25, 955, 10.1038/sj.emboj.7601003 · DOI
- 2005, Protein production by auto-induction in high density shaking cultures, Protein Expr Purif, 41, 207, 10.1016/j.pep.2005.01.016 · DOI
- 2013, Neurotransmitter release: the last millisecond in the life of a synaptic vesicle, Neuron, 80, 675, 10.1016/j.neuron.2013.10.022 · DOI · Paper page
- 1998, Crystal structure of a SNARE complex involved in synaptic exocytosis at 2.4 A resolution, Nature, 395, 347, 10.1038/26412 · DOI · Paper page
- 2006, Munc18-1 expression levels control synapse recovery by regulating readily releasable pool size, Proc Natl Acad Sci U S A, 103, 18332, 10.1073/pnas.0608507103 · DOI
- 2020, SNAREopathies: Diversity in Mechanisms and Symptoms, Neuron, 107, 22, 10.1016/j.neuron.2020.05.036 · DOI · Paper page
- 1967, Computer Experiments on Classical Fluids, I. Thermodynamical Properties of Lennard-Jones Molecules. Phys Rev, 159, 98
- 2020, Acute disruption of the synaptic vesicle membrane protein synaptotagmin 1 using knockoff in mouse hippocampal neurons, Elife, 9
- 2020, Ca(2+)-dependent release of synaptotagmin-1 from the SNARE complex on phosphatidylinositol 4,5-bisphosphate-containing membranes, Elife, 9
- 2013, A sequential vesicle pool model with a single release sensor and a Ca(2+)-dependent priming catalyst effectively explains Ca(2+)-dependent properties of neurosecretion, PLoS Comput Biol, 9, e1003362, 10.1371/journal.pcbi.1003362 · DOI
- 2019, Munc18 and Munc13 serve as a functional template to orchestrate neuronal SNARE complex assembly, Nat Commun, 10, 69, 10.1038/s41467-018-08028-6 · DOI
- 2002, Genetic ablation of the t-SNARE SNAP-25 distinguishes mechanisms of neuroexocytosis, Nat Neurosci, 5, 19, 10.1038/nn783 · DOI
- 2010, Opposing functions of two sub-domains of the SNARE-complex in neurotransmission, EMBO J, 29, 2477, 10.1038/emboj.2010.130 · DOI
- 1998, SNAREpins: minimal machinery for membrane fusion, Cell, 92, 759, 10.1016/S0092-8674(00)81404-X · DOI
- 2014, Innervation by a GABAergic neuron depresses spontaneous release in glutamatergic neurons and unveils the clamping phenotype of synaptotagmin-1, J Neurosci, 34, 2100, 10.1523/JNEUROSCI.3934-13.2014 · DOI
- 1998, ROP, the Drosophila Sec1 homolog, interacts with syntaxin and regulates neurotransmitter release in a dosage-dependent manner, EMBO J, 17, 127, 10.1093/emboj/17.1.127 · DOI
- 2022, Assessing the landscape of STXBP1-related disorders in 534 individuals, Brain, 145, 1668, 10.1093/brain/awab327 · DOI · Paper page
- 2009, Synaptotagmin-1 functions as a Ca2+ sensor for spontaneous release, Nat Neurosci, 12, 759, 10.1038/nn.2320 · DOI · Paper page
- 2017, The primed SNARE-complexin-synaptotagmin complex for neuronal exocytosis, Nature, 548, 420, 10.1038/nature23484 · DOI
- 2002, Short-term synaptic plasticity, Annu Rev Physiol, 64, 355, 10.1146/annurev.physiol.64.092501.114547 · DOI · Paper page
Metadata
- Authors
- Kádková, A., Murach, J., Østergaard, M., Malsam, A., Malsam, J., Lolicato, F., Nickel, W., Söllner, T. H., & Sørensen, J. B.
- Affiliations
- University of Copenhagen (DK)
- Heidelberg University Biochemistry Center
- Corresponding author
- Sørensen, Jakob B.
- Venue
- eLife
- Publisher
- eLife Sciences Publications, Ltd
- Published
- 2024-01-19
- ISSN
- 2050-084X (ISSN-L)
- OpenAlex
- W4391034767
- Cited by
- 0
- References
- 6
- Type
- posted content
- Language
- en
- Open access
- gold
- doi.org
- Locations
- eLife (acceptedVersion, cc-by)
- Funders
- Novo Nordisk Foundation (NNF19OC0058298)
- Independent Research Fund Denmark (8020-00228A)
- Lundbeck Foundation (R277-2018-802)
- Deutsche Forschungsgemeinschaft (278001972 - TRR 186, LO 2821/1-1, SFB/TRR 186 A1, Ni 423/13-1, INST 35/1314-1 FUGG, INST 35/1503-1 FUGG)
- CSC - IT Center for Science
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Extracellular vesicles in disease
- Keywords
- SNAP-25, SNARE complex, synaptic vesicle exocytosis, synaptotagmin-1, epileptic encephalopathy, readily releasable pool, spontaneous release, miniature excitatory postsynaptic currents, gain-of-function mutations
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