Gabaldón, Toni

Advances and Applications in the Quest for Orthologs

Glover, N., Dessimoz, C., Ebersberger, I., Forslund, S. K., Gabaldón, T., Huerta-Cepas, J., Martin, M.-J., Muffato, M., Patricio, M., Pereira, C., et al. (2019) · Molecular Biology and Evolution

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 94

Regulation of Candida glabrata oxidative stress resistance is adapted to host environment

Roetzer, A., Klopf, E., Gratz, N., Marcet-Houben, M., Hiller, E., Rupp, S., Gabaldón, T., Kovarik, P., & Schüller, C. (2011) · FEBS Letters

Fungal and yeast genetics researchAntifungal resistance and susceptibility

Cited by 90

The tree versus the forest: the fungal tree of life and the topological diversity within the yeast phylome.

Marcet-Houben, M., & Gabaldón, T. (2009) · PLoS ONE

Genomics and Phylogenetic StudiesYeasts and Rust Fungi Studies

Cited by 83

Phylogenomics of the oxidative phosphorylation in fungi reveals extensive gene duplication followed by functional divergence

Marcet-Houben, M., Marceddu, G., & Gabaldón, T. (2009) · BMC Evolutionary Biology

Fungal and yeast genetics researchGenomics and Phylogenetic Studies

Cited by 75

Joining forces in the quest for orthologs

Gabaldón, T., Dessimoz, C., Huxley-Jones, J., Vilella, A. J., Sonnhammer, E. L., & Lewis, S. (2009) · Genome Biology

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 74

Biological processes modulating longevity across primates: a phylogenetic genome-phenome analysis

Muntané, G., Farré, X., Rodríguez, J. A., Pegueroles, C., Hughes, D. A., de Magalhães, J. P., Gabaldón, T., & Navarro, A. (2018) · Molecular Biology and Evolution

Genetics, Aging, and Longevity in Model OrganismsEvolution and Genetic Dynamics

Cited by 73

Acquired amphotericin B resistance leads to fitness trade-offs that can be mitigated by compensatory evolution in Candida auris

Carolus, H., Sofras, D., Boccarella, G., Sephton-Clark, P., Biriukov, V., Cauldron, N. C., Lobo Romero, C., Vergauwen, R., Yazdani, S., Pierson, S., et al. (2024) · Nature Microbiology

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 72

The little skate genome and the evolutionary emergence of wing-like fins

Marlétaz, F., de la Calle-Mustienes, E., Acemel, R. D., Paliou, C., Naranjo, S., Martínez-García, P. M., Cases, I., Sleight, V. A., Hirschberger, C., Marcet-Houben, M., et al. (2023) · Nature

Developmental Biology and Gene RegulationGenomics and Chromatin Dynamics

Cited by 71

Functional Characterization of Clinical Isolates of the Opportunistic Fungal Pathogen Aspergillus nidulans

Bastos, R. W., Valero, C., Silva, L. P., Schoen, T., Drott, M., Brauer, V., Silva-Rocha, R., Lind, A., Steenwyk, J. L., Rokas, A., et al. (2020) · mSphere

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 60

Genome Comparisons of Candida glabrata Serial Clinical Isolates Reveal Patterns of Genetic Variation in Infecting Clonal Populations

Carreté, L., Ksiezopolska, E., Gómez-Molero, E., Angoulvant, A., Bader, O., Fairhead, C., & Gabaldón, T. (2019) · Frontiers in Microbiology

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 58

Triazole Evolution of Candida parapsilosis Results in Cross-Resistance to Other Antifungal Drugs, Influences Stress Responses, and Alters Virulence in an Antifungal Drug-Dependent Manner

Papp, C., Bohner, F., Kocsis, K., Varga, M., Szekeres, A., Bodai, L., Willis, J. R., Gabaldón, T., Tóth, R., Nosanchuk, J. D., et al. (2020) · mSphere

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 42

Transient mitochondria dysfunction confers fungal cross-resistance against phagocytic killing and fluconazole

Siscar-Lewin, S., Gabaldón, T., Aldejohann, A. M., Kurzai, O., Hube, B., & Brunke, S. (2021) · mBio

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 36

Discovery of EMRE in fungi resolves the true evolutionary history of the mitochondrial calcium uniporter

Pittis, A. A., Goh, V., Cebrian-Serrano, A., Wettmarshausen, J., Perocchi, F., & Gabaldón, T. (2020) · Nature Communications

Mitochondrial Function and PathologyIon channel regulation and function

Cited by 29

Quest for Orthologs in the Era of Biodiversity Genomics

Langschied, F., Bordin, N., Cosentino, S., Fuentes-Palacios, D., Glover, N., Hiller, M., Hu, Y., Huerta-Cepas, J., Coelho, L. P., Iwasaki, W., et al. (2024) · Genome Biology and Evolution

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 26

Multi‐Omics Analysis of Experimentally Evolved Candida auris Isolates Reveals Modulation of Sterols, Sphingolipids, and Oxidative Stress in Acquired Amphotericin B Resistance

Chauhan, A., Carolus, H., Sofras, D., Kumar, M., Kumar, P., Nair, R., Narayanan, A., Yadav, K., Ali, B., Biriukov, V., et al. (2025) · Molecular Microbiology

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 16

Shared evolutionary footprints suggest mitochondrial oxidative damage underlies multiple complex I losses in fungi

Schikora-Tamarit, M. À., Marcet-Houben, M., Nosek, J., & Gabaldón, T. (2021) · Open Biology

Mitochondrial Function and PathologyFungal and yeast genetics research

Cited by 16

Long-term stability of acquired drug resistance and resistance associated mutations in the fungal pathogen Nakaseomyces glabratus (Candida glabrata)

Ksiezopolska, E., Schikora-Tamarit, M. À., Carlos Nunez-Rodriguez, J., & Gabaldón, T. (2024) · Frontiers in Cellular and Infection Microbiology

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 15