Dill, Ken A.

From Levinthal to pathways to funnels

Dill, K. A., & Chan, H. S. (1997) · Nature Structural & Molecular Biology

Protein Structure and DynamicsRNA and protein synthesis mechanisms

Cited by 2,293

The Protein-Folding Problem, 50 Years On

Dill, K. A., & MacCallum, J. L. (2012) · Science

Protein Structure and DynamicsRNA and protein synthesis mechanisms

Cited by 1,699

The Protein Folding Problem

Dill, K. A., Ozkan, S. B., Shell, M. S., & Weikl, T. R. (2008) · Annual Review of Biophysics

Protein Structure and DynamicsRNA and protein synthesis mechanisms

Cited by 1,163

How Ions Affect the Structure of Water

Hribar, B., Southall, N. T., Vlachy, V., & Dill, K. A. (2002) · Journal of the American Chemical Society

Spectroscopy and Quantum Chemical StudiesAdvanced Physical and Chemical Molecular Interactions

Cited by 860

Additivity principles in biochemistry.

Dill, K. A. (1997) · Journal of Biological Chemistry

thermodynamics and calorimetric analysesProtein Structure and Dynamics

Cited by 347

On the use of orientational restraints and symmetry corrections in alchemical free energy calculations

Mobley, D. L., Chodera, J. D., & Dill, K. A. (2006) · The Journal of Chemical Physics

Computational Drug Discovery MethodsAdvanced Physical and Chemical Molecular Interactions

Cited by 316

Predicting Absolute Ligand Binding Free Energies to a Simple Model Site

Mobley, D. L., Graves, A. P., Chodera, J. D., McReynolds, A. C., Shoichet, B. K., & Dill, K. A. (2007) · Journal of Molecular Biology

Computational Drug Discovery MethodsProtein Structure and Dynamics

Cited by 310

Physical limits of cells and proteomes

Dill, K. A., Ghosh, K., & Schmit, J. D. (2011) · Proceedings of the National Academy of Sciences

Protein Structure and DynamicsRNA and protein synthesis mechanisms

Cited by 298

Calculating the binding free energies of charged species based on explicit-solvent simulations employing lattice-sum methods: An accurate correction scheme for electrostatic finite-size effects

Rocklin, G. J., Mobley, D. L., Dill, K. A., & Hünenberger, P. H. (2013) · The Journal of Chemical Physics

Protein Structure and DynamicsAdvanced Chemical Physics Studies

Cited by 234

Ligand binding to proteins: The binding landscape model

Miller, D. W., & Dill, K. A. (1997) · Protein Science

Protein Structure and DynamicsProtein Interaction Studies and Fluorescence Analysis

Cited by 178

Proteostasis collapse is a driver of cell aging and death

Santra, M., Dill, K. A., & de Graff, A. M. R. (2019) · Proceedings of the National Academy of Sciences

Genetics, Aging, and Longevity in Model OrganismsHeat shock proteins research

Cited by 175

Foldamer hypothesis for the growth and sequence differentiation of prebiotic polymers

Guseva, E., Zuckermann, R. N., & Dill, K. A. (2017) · Proceedings of the National Academy of Sciences

Origins and Evolution of LifeRNA and protein synthesis mechanisms

Cited by 76

How do cells adapt? stories told in landscapes

Agozzino, L., Balázsi, G., Wang, J., & Dill, K. A. (2020) · Annual Review of Chemical and Biomolecular Engineering

Evolution and Genetic DynamicsGene Regulatory Network Analysis

Cited by 37

MHC-Fine: Fine-tuned AlphaFold for Precise MHC-Peptide Complex Prediction

Glukhov, E., Kalitin, D., Stepanenko, D., Zhu, Y., Nguyen, T., Jones, G., Simmerling, C., Mitchell, J. C., Vajda, S., Dill, K. A., et al. (2023) · Biophysical Journal

vaccines and immunoinformatics approachesProtein Structure and Dynamics

Cited by 22

Building Markov state models using optimal transport theory

Dixit, P. D., & Dill, K. A. (2019) · The Journal of Chemical Physics

Protein Structure and DynamicsAdvanced Physical and Chemical Molecular Interactions

Cited by 9

Computational Procedure for Predicting Excipient Effects on Protein–Protein Affinities

Dignon, G. L., & Dill, K. A. (2024) · Journal of Chemical Theory and Computation

Protein Structure and DynamicsProtein purification and stability

Cited by 5