Hahn, Matthew W.

CAFE: a computational tool for the study of gene family evolution

De Bie, T., Cristianini, N., Demuth, J. P., & Hahn, M. W. (2006) · Bioinformatics

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 1,790

Evolutionary and biomedical insights from the rhesus macaque genome.

Gibbs, R. A., Rogers, J., Katze, M. G., Bumgarner, R., Weinstock, G. M., Mardis, E. R., Remington, K. A., Strausberg, R. L., Venter, J. C., Wilson, R. K., et al. (2007) · Science

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 1,403

Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow

Cruickshank, T. E., & Hahn, M. W. (2014) · Molecular Ecology

Genetic diversity and population structureEvolution and Genetic Dynamics

Cited by 1,061

CAFE 5 models variation in evolutionary rates among gene families

Mendes, F. K., Vanderpool, D., Fulton, B., & Hahn, M. W. (2021) · Bioinformatics

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 833

Genomic islands of speciation in Anopheles gambiae

Turner, T. L., Hahn, M. W., & Nuzhdin, S. V. (2005) · PLoS Biology

Malaria Research and ControlGenetic diversity and population structure

Cited by 734

Comparative Genomics of Centrality and Essentiality in Three Eukaryotic Protein-Interaction Networks

Hahn, M. W., & Kern, A. D. (2005) · Molecular Biology and Evolution

Bioinformatics and Genomic NetworksEvolution and Genetic Dynamics

Cited by 656

Phylogenomics reveals three sources of adaptive variation during a rapid radiation

Pease, J. B., Haak, D. C., Hahn, M. W., & Moyle, L. C. (2016) · PLOS Biology

Chromosomal and Genetic VariationsPlant Diversity and Evolution

Cited by 432

Comparative analysis of the domestic cat genome reveals genetic signatures underlying feline biology and domestication

Montague, M. J., Li, G., Gandolfi, B., Khan, R., Aken, B. L., Searle, S. M. J., Minx, P., Hillier, L. W., Koboldt, D. C., Davis, B. W., et al. (2014) · Proceedings of the National Academy of Sciences

Genetic and phenotypic traits in livestockHuman-Animal Interaction Studies

Cited by 340

Detection and Polarization of Introgression in a Five-Taxon Phylogeny

Pease, J. B., & Hahn, M. W. (2015) · Systematic Biology

Genomics and Phylogenetic StudiesGenetic diversity and population structure

Cited by 268

Gene tree discordance causes apparent substitution rate variation

Mendes, F. K., & Hahn, M. W. (2016) · Systematic Biology

Genomics and Phylogenetic StudiesGenetic diversity and population structure

Cited by 189

Irrational exuberance for resolved species trees: COMMENTARY

Hahn, M. W., & Nakhleh, L. (2016) · Evolution

Genomics and Phylogenetic StudiesEvolution and Paleontology Studies

Cited by 187

The genome of the vervet (Chlorocebus aethiops sabaeus)

Warren, W. C., Jasinska, A. J., García-Pérez, R., Svardal, H., Tomlinson, C., Rocchi, M., Archidiacono, N., Capozzi, O., Minx, P., Montague, M. J., et al. (2015) · Genome Research

Chromosomal and Genetic VariationsGenomics and Phylogenetic Studies

Cited by 123

Speciation as a sieve for ancestral polymorphism

Guerrero, R. F., & Hahn, M. W. (2017) · Molecular Ecology

Genetic diversity and population structureEvolution and Genetic Dynamics

Cited by 109

Locus- and population-specific selection and differentiation between incipient species of Anopheles gambiae

Turner, T. L., & Hahn, M. W. (2007) · Molecular Biology and Evolution

Malaria Research and ControlGenetic diversity and population structure

Cited by 66

Gene expression divergence between malaria vector sibling species Anopheles gambiae and An. coluzzii from rural and urban Yaoundé Cameroon

Cassone, B. J., Kamdem, C., Cheng, C., Tan, J. C., Hahn, M. W., Costantini, C., & Besansky, N. J. (2014) · Molecular Ecology

Malaria Research and ControlGenetic diversity and population structure

Cited by 46