Lemey, Philippe

Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil

Faria, N. R., Mellan, T. A., Whittaker, C., Claro, I. M., Candido, D. D. S., Mishra, S., Crispim, M. A. E., Sales, F. C. S., Hawryluk, I., McCrone, J. T., et al. (2021) · Science

SARS-CoV-2 and COVID-19 ResearchCOVID-19 epidemiological studies

Cited by 1,461

Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic

Boni, M. F., Lemey, P., Jiang, X., Lam, T. T.-Y., Perry, B. W., Castoe, T. A., Rambaut, A., & Robertson, D. L. (2020) · Nature Microbiology

SARS-CoV-2 and COVID-19 ResearchAnimal Virus Infections Studies

Cited by 1,014

Evolution and epidemic spread of SARS-CoV-2 in Brazil

Candido, D. S., Claro, I. M., de Jesus, J. G., Souza, W. M., Moreira, F. R. R., Dellicour, S., Mellan, T. A., du Plessis, L., Pereira, R. H. M., Sales, F. C. S., et al. (2020) · Science

SARS-CoV-2 and COVID-19 ResearchCOVID-19 epidemiological studies

Cited by 573

The emergence and ongoing convergent evolution of the N501Y lineages coincides with a major global shift in the SARS-CoV-2 selective landscape

Martin, D. P., Weaver, S., Tegally, H., San, E. J., Shank, S. D., Wilkinson, E., Lucaci, A. G., Giandhari, J., Naidoo, S., Pillay, Y., et al. (2021) · Cell

SARS-CoV-2 and COVID-19 ResearchEvolution and Genetic Dynamics

Cited by 291

Ancient DNA analyses exclude humans as the driving force behind late Pleistocene musk ox ( Ovibos moschatus ) population dynamics

Campos, P. F., Willerslev, E., Sher, A., Orlando, L., Axelsson, E., Tikhonov, A., Aaris-Sørensen, K., Greenwood, A. D., Kahlke, R.-D., Kosintsev, P., et al. (2010) · Proceedings of the National Academy of Sciences

Genetic diversity and population structureForensic and Genetic Research

Cited by 239

New insights into flavivirus evolution, taxonomy and biogeographic history, extended by analysis of canonical and alternative coding sequences

Moureau, G., Cook, S., Lemey, P., Nougairede, A., Forrester, N. L., Khasnatinov, M., Charrel, R. N., Firth, A. E., Gould, E. A., & de Lamballerie, X. (2015) · PLOS ONE

Mosquito-borne diseases and controlDiptera species taxonomy and behavior

Cited by 169

HIV rebound is predominantly fueled by genetically identical viral expansions from diverse reservoirs

De Scheerder, M.-A., Vrancken, B., Dellicour, S., Schlub, T., Lee, E., Shao, W., Rutsaert, S., Verhofstede, C., Kerre, T., Malfait, T., et al. (2019) · Cell Host & Microbe

HIV Research and TreatmentHIV/AIDS drug development and treatment

Cited by 165

The molecular population genetics of HIV-1 group O.

Lemey, P., Pybus, O. G., Rambaut, A., Drummond, A. J., Robertson, D. L., Roques, P., Worobey, M., & Vandamme, A.-M. (2004) · Genetics

HIV Research and TreatmentEvolution and Genetic Dynamics

Cited by 131

The introduction of fox rabies into Italy (2008–2011) was due to two viral genetic groups with distinct phylogeographic patterns

Fusaro, A., Monne, I., Salomoni, A., Angot, A., Trolese, M., Ferrè, N., Mutinelli, F., Holmes, E. C., Capua, I., Lemey, P., et al. (2013) · Infection, Genetics and Evolution

Rabies epidemiology and controlAnimal Disease Management and Epidemiology

Cited by 20