Beagan, Jonathan A.

YY1 and CTCF orchestrate a 3D chromatin looping switch during early neural lineage commitment

Beagan, J. A., Duong, M. T., Titus, K. R., Zhou, L., Cao, Z., Ma, J., Lachanski, C. V., Gillis, D. R., & Phillips-Cremins, J. E. (2017) · Genome Research

Genomics and Chromatin DynamicsChromatin Remodeling and Cancer

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Disease-Associated Short Tandem Repeats Co-localize with Chromatin Domain Boundaries

Sun, J. H., Zhou, L., Emerson, D. J., Phyo, S. A., Titus, K. R., Gong, W., Gilgenast, T. G., Beagan, J. A., Davidson, B. L., Tassone, F., et al. (2018) · Cell

Genetic Neurodegenerative DiseasesGenomics and Chromatin Dynamics

Cited by 249

Three-dimensional genome restructuring across timescales of activity-induced neuronal gene expression

Beagan, J. A., Pastuzyn, E. D., Fernandez, L. R., Guo, M. H., Feng, K., Titus, K. R., Chandrashekar, H., Shepherd, J. D., & Phillips-Cremins, J. E. (2020) · Nature Neuroscience

Genomics and Chromatin DynamicsChromatin Remodeling and Cancer

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LADL: light-activated dynamic looping for endogenous gene expression control

Kim, J. H., Rege, M., Valeri, J., Dunagin, M. C., Metzger, A., Titus, K. R., Gilgenast, T. G., Gong, W., Beagan, J. A., Raj, A., et al. (2019) · Nature Methods

CRISPR and Genetic EngineeringGenomics and Chromatin Dynamics

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Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State during Somatic Cell Reprogramming

Beagan, J. A., Gilgenast, T. G., Kim, J., Plona, Z., Norton, H. K., Hu, G., Hsu, S. C., Shields, E. J., Lyu, X., Apostolou, E., et al. (2016) · Cell Stem Cell

Pluripotent Stem Cells ResearchGenomics and Chromatin Dynamics

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