Stappenbeck, Thaddeus S.

A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility

Desai, M. S., Seekatz, A. M., Koropatkin, N. M., Kamada, N., Hickey, C. A., Wolter, M., Pudlo, N. A., Kitamoto, S., Terrapon, N., Muller, A., et al. (2016) · Cell

Gut microbiota and healthGastrointestinal motility and disorders

Cited by 2,805

A key role for autophagy and the autophagy gene Atg16l1 in mouse and human intestinal Paneth cells

Cadwell, K., Liu, J. Y., Brown, S. L., Miyoshi, H., Loh, J., Lennerz, J. K., Kishi, C., Kc, W., Carrero, J. A., Hunt, S., et al. (2008) · Nature

Inflammatory Bowel DiseaseAutophagy in Disease and Therapy

Cited by 1,542

Disease-Specific Alterations in the Enteric Virome in Inflammatory Bowel Disease

Norman, J. M., Handley, S. A., Baldridge, M. T., Droit, L., Liu, C. Y., Keller, B. C., Kambal, A., Monaco, C. L., Zhao, G., Fleshner, P., et al. (2015) · Cell

Bacteriophages and microbial interactionsInflammatory Bowel Disease

Cited by 1,285

Peripheral education of the immune system by colonic commensal microbiota

Lathrop, S. K., Bloom, S. M., Rao, S. M., Nutsch, K., Lio, C.-W., Santacruz, N., Peterson, D. A., Stappenbeck, T. S., & Hsieh, C.-S. (2011) · Nature

T-cell and B-cell ImmunologyGut microbiota and health

Cited by 1,034

The microbial metabolite desaminotyrosine protects from influenza through type I interferon

Steed, A. L., Christophi, G. P., Kaiko, G. E., Sun, L., Goodwin, V. M., Jain, U., Esaulova, E., Artyomov, M. N., Morales, D. J., Holtzman, M. J., et al. (2017) · Science

interferon and immune responsesGut microbiota and health

Cited by 569

Development of an enhanced human gastrointestinal epithelial culture system to facilitate patient-based assays

VanDussen, K. L., Marinshaw, J. M., Shaikh, N., Miyoshi, H., Moon, C., Tarr, P. I., Ciorba, M. A., & Stappenbeck, T. S. (2015) · Gut

Digestive system and related healthCancer Cells and Metastasis

Cited by 525

Commensal Bacteroides Species Induce Colitis in Host-Genotype-Specific Fashion in a Mouse Model of Inflammatory Bowel Disease

Bloom, S. M., Bijanki, V. N., Nava, G. M., Sun, L., Malvin, N. P., Donermeyer, D. L., Dunne, W. M., Allen, P. M., & Stappenbeck, T. S. (2011) · Cell Host & Microbe

Gut microbiota and healthInflammatory Bowel Disease

Cited by 488

Atg16L1 T300A variant decreases selective autophagy resulting in altered cytokine signaling and decreased antibacterial defense

Lassen, K. G., Kuballa, P., Conway, K. L., Patel, K. K., Becker, C. E., Peloquin, J. M., Villablanca, E. J., Norman, J. M., Liu, T.-C., Heath, R. J., et al. (2014) · Proceedings of the National Academy of Sciences

Autophagy in Disease and TherapyInflammatory Bowel Disease

Cited by 373

Long-term IL-33–producing epithelial progenitor cells in chronic obstructive lung disease

Byers, D. E., Alexander-Brett, J., Patel, A. C., Agapov, E., Dang-Vu, G., Jin, X., Wu, K., You, Y., Alevy, Y., Girard, J.-P., et al. (2013) · Journal of Clinical Investigation

IL-33, ST2, and ILC PathwaysChronic Obstructive Pulmonary Disease (COPD) Research

Cited by 337

Genetics and Pathogenesis of Inflammatory Bowel Disease

Liu, T.-C., & Stappenbeck, T. S. (2016) · Annual Review of Pathology: Mechanisms of Disease

Inflammatory Bowel DiseaseGenetic Associations and Epidemiology

Cited by 289

Vertically transmitted faecal IgA levels determine extra-chromosomal phenotypic variation

Moon, C., Baldridge, M. T., Wallace, M. A., Burnham, C.-A. D., Virgin, H. W., & Stappenbeck, T. S. (2015) · Nature

Gut microbiota and healthGastrointestinal motility and disorders

Cited by 268

Myd88-dependent positioning of Ptgs2-expressing stromal cells maintains colonic epithelial proliferation during injury

Brown, S. L., Riehl, T. E., Walker, M. R., Geske, M. J., Doherty, J. M., Stenson, W. F., & Stappenbeck, T. S. (2007) · Journal of Clinical Investigation

Inflammatory mediators and NSAID effectsInflammatory Bowel Disease

Cited by 263

A common role for Atg16L1, Atg5, and Atg7 in small intestinal Paneth cells and Crohn disease

Cadwell, K., Patel, K. K., Komatsu, M., Virgin, IV, & Stappenbeck, T. S. (2009) · Autophagy

Inflammatory Bowel DiseaseAutophagy in Disease and Therapy

Cited by 224

A network medicine approach to investigation and population-based validation of disease manifestations and drug repurposing for COVID-19

Zhou, Y., Hou, Y., Shen, J., Mehra, R., Kallianpur, A., Culver, D. A., Gack, M. U., Farha, S., Zein, J., Comhair, S., et al. (2020) · PLoS Biology

Bioinformatics and Genomic NetworksSARS-CoV-2 and COVID-19 Research

Cited by 180

Organoids in gastrointestinal diseases: From experimental models to clinical translation

Günther, C., Winner, B., Neurath, M. F., & Stappenbeck, T. S. (2022) · Gut

3D Printing in Biomedical ResearchCancer Cells and Metastasis

Cited by 145

Laminin α5 influences the architecture of the mouse small intestine mucosa

Mahoney, Z. X., Stappenbeck, T. S., & Miner, J. H. (2008) · Journal of Cell Science

Cell Adhesion Molecules ResearchDigestive system and related health

Cited by 74