Waterhouse, Robert M.

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

Simão, F. A., Waterhouse, R. M., Ioannidis, P., Kriventseva, E. V., & Zdobnov, E. M. (2015) · Bioinformatics

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 13,344

BUSCO applications from quality assessments to gene prediction and phylogenomics

Waterhouse, R. M., Seppey, M., Simão, F. A., Manni, M., Ioannidis, P., Klioutchnikov, G., Kriventseva, E. V., & Zdobnov, E. M. (2018) · Molecular Biology and Evolution

Genomics and Phylogenetic StudiesChromosomal and Genetic Variations

Cited by 2,214

OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs

Zdobnov, E. M., Tegenfeldt, F., Kuznetsov, D., Waterhouse, R. M., Simão, F. A., Ioannidis, P., Seppey, M., Loetscher, A., & Kriventseva, E. V. (2017) · Nucleic Acids Research

Genomics and Phylogenetic StudiesBioinformatics and Genomic Networks

Cited by 438

How genomics can help biodiversity conservation

Theissinger, K., Fernandes, C., Formenti, G., Bista, I., Berg, P. R., Bleidorn, C., Bombarely, A., Crottini, A., Gallo, G. R., Godoy, J. A., et al. (2023) · Trends in Genetics

Genomics and Phylogenetic StudiesGenetic diversity and population structure

Cited by 401

The era of reference genomes in conservation genomics

Formenti, G., Theissinger, K., Fernandes, C., Bista, I., Bombarely, A., Bleidorn, C., Ciofi, C., Crottini, A., Godoy, J. A., Höglund, J., et al. (2022) · Trends in Ecology & Evolution

Genomics and Phylogenetic StudiesGenetic diversity and population structure

Cited by 340

Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci

Mudge, J. M., Jungreis, I., Hunt, T., Gonzalez, J. M., Wright, J. C., Kay, M., Davidson, C., Fitzgerald, S., Seal, R., Tweedie, S., et al. (2019) · Genome Research

Genomics and Phylogenetic StudiesGenomics and Rare Diseases

Cited by 80