Burley, Stephen K.

Weight-Reducing Effects of the Plasma Protein Encoded by the obese Gene

Halaas, J. L., Gajiwala, K. S., Maffei, M., Cohen, S. L., Chait, B. T., Rabinowitz, D., Lallone, R. L., Burley, S. K., & Friedman, J. M. (1995) · Science

Regulation of Appetite and ObesityAdipokines, Inflammation, and Metabolic Diseases

Cited by 4,451

RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences

Burley, S. K., Bhikadiya, C., Bi, C., Bittrich, S., Chen, L., Crichlow, G. V., Christie, C. H., Dalenberg, K., Di Costanzo, L., Duarte, J. M., et al. (2021) · Nucleic Acids Research

Enzyme Structure and FunctionProtein Structure and Dynamics

Cited by 1,581

Protein Data Bank: the single global archive for 3D macromolecular structure data

wwPDB consortium, Burley, S. K., Berman, H. M., Bhikadiya, C., Bi, C., Chen, L., Costanzo, L. D., Christie, C., Duarte, J. M., Dutta, S., et al. (2019) · Nucleic Acids Research

Enzyme Structure and FunctionProtein Structure and Dynamics

Cited by 1,163

Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures

Sehnal, D., Bittrich, S., Deshpande, M., Svobodová, R., Berka, K., Bazgier, V., Velankar, S., Burley, S. K., Koča, J., & Rose, A. S. (2021) · Nucleic Acids Research

Enzyme Structure and FunctionProtein Structure and Dynamics

Cited by 1,154

Hierarchical phosphorylation of the translation inhibitor 4E-BP1

Gingras, A.-C., Raught, B., Gygi, S. P., Niedzwiecka, A., Miron, M., Burley, S. K., Polakiewicz, R. D., Wyslouch-Cieszynska, A., Aebersold, R., & Sonenberg, N. (2001) · Genes & Development

PI3K/AKT/mTOR signaling in cancerRNA and protein synthesis mechanisms

Cited by 883

X-Ray Structures of Myc-Max and Mad-Max Recognizing DNA

Nair, S. K., & Burley, S. K. (2003) · Cell

Genomics and Chromatin DynamicsProtein Structure and Dynamics

Cited by 551

D3R grand challenge 2015: evaluation of protein-ligand pose and affinity predictions.

Gathiaka, S., Liu, S., Chiu, M., Yang, H., Stuckey, J. A., Kang, Y. N., Delproposto, J., Kubish, G., Dunbar, J. B., Carlson, H. A., et al. (2016) · Journal of Computer-Aided Molecular Design

Computational Drug Discovery MethodsProtein Structure and Dynamics

Cited by 207

D3R grand challenge 2: blind prediction of protein–ligand poses, affinity rankings, and relative binding free energies.

Gaieb, Z., Liu, S., Gathiaka, S., Chiu, M., Yang, H., Shao, C., Feher, V. A., Walters, W. P., Kuhn, B., Rudolph, M. G., et al. (2018) · Journal of Computer-Aided Molecular Design

Computational Drug Discovery MethodsProtein Structure and Dynamics

Cited by 193

The cholesterol-regulated StarD4 gene encodes a StAR-related lipid transfer protein with two closely related homologues, StarD5 and StarD6

Soccio, R. E., Adams, R. M., Romanowski, M. J., Sehayek, E., Burley, S. K., & Breslow, J. L. (2002) · Proceedings of the National Academy of Sciences

Cholesterol and Lipid MetabolismLipid metabolism and biosynthesis

Cited by 188

Crystal structure of the Mus musculus cholesterol-regulated START protein 4 (StarD4) containing a StAR-related lipid transfer domain

Romanowski, M. J., Soccio, R. E., Breslow, J. L., & Burley, S. K. (2002) · Proceedings of the National Academy of Sciences

Cholesterol and Lipid MetabolismProtein Structure and Dynamics

Cited by 162

RCSB Protein Data Bank: improved annotation, search and visualization of membrane protein structures archived in the PDB

Bittrich, S., Rose, Y., Segura, J., Lowe, R., Westbrook, J. D., Duarte, J. M., & Burley, S. K. (2022) · Bioinformatics

Enzyme Structure and FunctionProtein Structure and Dynamics

Cited by 79

Modeling of ACE2 and antibodies bound to SARS-CoV-2 provides insights into infectivity and immune evasion

Lubin, J. H., Markosian, C., Balamurugan, D., Ma, M. T., Chen, C.-H., Liu, D., Pasqualini, R., Arap, W., Burley, S. K., & Khare, S. D. (2023) · JCI Insight

SARS-CoV-2 and COVID-19 Researchvaccines and immunoinformatics approaches

Cited by 26

ModelCIF: An Extension of PDBx/mmCIF Data Representation for Computed Structure Models

Vallat, B., Tauriello, G., Bienert, S., Haas, J., Webb, B. M., Žídek, A., Zheng, W., Peisach, E., Piehl, D. W., Anischanka, I., et al. (2023) · Journal of Molecular Biology

Enzyme Structure and FunctionProtein Structure and Dynamics

Cited by 26

X‐ray structure of an M. jannaschii DNA‐binding protein: Implications for antibiotic resistance in S. aureus

Ray, S. S., Bonanno, J. B., Chen, H., de Lencastre, H., Wu, S., Tomasz, A., & Burley, S. K. (2003) · Proteins: Structure, Function, and Bioinformatics

Enzyme Structure and FunctionAntimicrobial Resistance in Staphylococcus

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Q -score as a reliability measure for protein, nucleic acid and small-molecule atomic coordinate models derived from 3DEM maps

Pintilie, G., Shao, C., Wang, Z., Hudson, B. P., Flatt, J. W., Schmid, M. F., Morris, K. L., Burley, S. K., & Chiu, W. (2025) · Acta Crystallographica Section D Structural Biology

Advanced Electron Microscopy Techniques and ApplicationsEnzyme Structure and Function

Cited by 21

Q-score as a reliability measure for protein, nucleic acid, and small molecule atomic coordinate models derived from 3DEM density maps

Pintilie, G., Shao, C., Wang, Z., Hudson, B. P., Flatt, J. W., Schmid, M. F., Morris, K., Burley, S. K., & Chiu, W. (2025) · Acta Crystallographica Section D Structural Biology

Advanced Electron Microscopy Techniques and ApplicationsEnzyme Structure and Function

Cited by 21

Generative artificial intelligence performs rudimentary structural biology modeling

Ille, A. M., Markosian, C., Burley, S. K., Mathews, M. B., Pasqualini, R., & Arap, W. (2024) · Scientific Reports

Protein Structure and DynamicsComputational Drug Discovery Methods

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