Bhatt, Ami S.

Increased GVHD-related mortality with broad-spectrum antibiotic use after allogeneic hematopoietic stem cell transplantation in human patients and mice

Shono, Y., Docampo, M. D., Peled, J. U., Perobelli, S. M., Velardi, E., Tsai, J. J., Slingerland, A. E., Smith, O. M., Young, L. F., Gupta, J., et al. (2016) · Science Translational Medicine

Hematopoietic Stem Cell TransplantationNeutropenia and Cancer Infections

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Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome

Nayfach, S., Páez-Espino, D., Call, L., Low, S. J., Sberro, H., Ivanova, N. N., Proal, A. D., Fischbach, M. A., Bhatt, A. S., Hugenholtz, P., et al. (2021) · Nature Microbiology

Bacteriophages and microbial interactionsGenomics and Phylogenetic Studies

Cited by 580

A Gut Commensal-Produced Metabolite Mediates Colonization Resistance to Salmonella Infection

Jacobson, A., Lam, L., Rajendram, M., Tamburini, F., Honeycutt, J., Pham, T., Van Treuren, W., Pruss, K., Stabler, S. R., Lugo, K., et al. (2018) · Cell Host & Microbe

Gut microbiota and healthEscherichia coli research studies

Cited by 507

Complementary genomic approaches highlight the PI3K/mTOR pathway as a common vulnerability in osteosarcoma

Perry, J. A., Kiezun, A., Tonzi, P., Van Allen, E. M., Carter, S. L., Baca, S. C., Cowley, G. S., Bhatt, A. S., Rheinbay, E., Pedamallu, C. S., et al. (2014) · Proceedings of the National Academy of Sciences

Sarcoma Diagnosis and TreatmentPI3K/AKT/mTOR signaling in cancer

Cited by 481

Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes

Sberro, H., Fremin, B. J., Zlitni, S., Edfors, F., Greenfield, N., Snyder, M. P., Pavlopoulos, G. A., Kyrpides, N. C., & Bhatt, A. S. (2019) · Cell

Genomics and Phylogenetic StudiesGut microbiota and health

Cited by 237

Quantifying bias introduced by sample collection in relative and absolute microbiome measurements

Maghini, D. G., Dvorak, M., Dahlen, A., Roos, M., Doyle, B., Kuersten, S., & Bhatt, A. S. (2024) · Nature Biotechnology

Gut microbiota and healthMicrobial Community Ecology and Physiology

Cited by 116

Short- and long-read metagenomics of urban and rural South African gut microbiomes reveal a transitional composition and undescribed taxa

Tamburini, F. B., Maghini, D., Oduaran, O. H., Brewster, R., Hulley, M. R., Sahibdeen, V., Norris, S. A., Tollman, S., Kahn, K., Wagner, R. G., et al. (2022) · Nature Communications

Gut microbiota and healthGenomics and Phylogenetic Studies

Cited by 88

Viroid-like colonists of human microbiomes

Zheludev, I. N., Edgar, R. C., Lopez-Galiano, M. J., de la Peña, M., Babaian, A., Bhatt, A. S., & Fire, A. Z. (2024) · Cell

Bacteriophages and microbial interactionsRNA and protein synthesis mechanisms

Cited by 73

Viroid-like colonists of human microbiomes

Zheludev, I. N., Edgar, R. C., Lopez-Galiano, M. J., de la Peña, M., Babaian, A., Bhatt, A. S., & Fire, A. Z. (2024) · Cell

Bacteriophages and microbial interactionsRNA and protein synthesis mechanisms

Cited by 73

Intragenic DNA inversions expand bacterial coding capacity

Chanin, R. B., West, P. T., Park, R. M., Wirbel, J., Green, G. Z. M., Miklos, A. M., Gill, M. O., Hickey, A. S., Brooks, E. F., & Bhatt, A. S. (2023) · Nature

Bacterial Genetics and BiotechnologyGenomics and Phylogenetic Studies

Cited by 41

Antibiotic practice patterns in hematopoietic cell transplantation: A survey of blood and marrow transplant clinical trials network centers

Rashidi, A., Wangjam, T., Bhatt, A. S., Weisdorf, D. J., Holtan, S. G., & on behalf of BMT CTN Investigators (2018) · American Journal of Hematology

Neutropenia and Cancer InfectionsAntibiotic Use and Resistance

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Chemoproteomic identification of a dipeptidyl peptidase 4 (DPP4) homolog in Bacteroides thetaiotaomicron important for envelope integrity and fitness

Keller, L., Nguyen, T., Liu, L., Lakemeyer, M., Gelsinger, D., Chanin, R., Ngo, N., Lum, K., Faucher, F., Ipock, P., et al. (2022) · Nature Chemical Biology

Bacterial Genetics and BiotechnologyGut microbiota and health

Cited by 25

Chemoproteomic identification of a DPP4 homolog in Bacteroides thetaiotaomicron

Keller, L. J., Nguyen, T. H., Liu, L. J., Hurysz, B. M., Lakemeyer, M., Guerra, M., Gelsinger, D. J., Chanin, R., Ngo, N., Lum, K. M., et al. (2023) · Nature Chemical Biology

Bacterial Genetics and BiotechnologyGut microbiota and health

Cited by 24