Penny, David

Evolutionary analysis of Arabidopsis , cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus

Martin, W., Rujan, T., Richly, E., Hansen, A., Cornelsen, S., Lins, T., Leister, D., Stoebe, B., Hasegawa, M., & Penny, D. (2002) · Proceedings of the National Academy of Sciences

Photosynthetic Processes and MechanismsProtist diversity and phylogeny

Cited by 1,178

The modern molecular clock

Bromham, L., & Penny, D. (2003) · Nature Reviews Genetics

Evolution and Genetic DynamicsGenomics and Phylogenetic Studies

Cited by 615

Mass survival of birds across the Cretaceous–Tertiary boundary: Molecular evidence.

Cooper, A., & Penny, D. (1997) · Science

Evolution and Paleontology StudiesPaleontology and Evolutionary Biology

Cited by 472

Genome-scale phylogeny and the detection of systematic biases.

Phillips, M. J., Delsuc, F., & Penny, D. (2004) · Molecular Biology and Evolution

Genomics and Phylogenetic StudiesYeasts and Rust Fungi Studies

Cited by 450

The biology of intron gain and loss

Jeffares, D. C., Mourier, T., & Penny, D. (2006) · Trends in Genetics

Chromosomal and Genetic VariationsRNA Research and Splicing

Cited by 296

Mathematical Elegance with Biochemical Realism: The Covarion Model of Molecular Evolution

Penny, D., McComish, B. J., Charleston, M. A., & Hendy, M. D. (2001) · Journal of Molecular Evolution

Genomics and Phylogenetic StudiesEvolution and Genetic Dynamics

Cited by 287

Early Penguin Fossils, Plus Mitochondrial Genomes, Calibrate Avian Evolution

Slack, K. E., Jones, C. M., Ando, T., Harrison, G. L. (., Fordyce, R. E., Arnason, U., & Penny, D. (2006) · Molecular Biology and Evolution

Paleontology and Evolutionary BiologyEvolution and Paleontology Studies

Cited by 283

The Path from the RNA World

Poole, A. M., Jeffares, D. C., & Penny, D. (1998) · Journal of Molecular Evolution

Origins and Evolution of LifeRNA and protein synthesis mechanisms

Cited by 274

Complex Spliceosomal Organization Ancestral to Extant Eukaryotes

Collins, L., & Penny, D. (2005) · Molecular Biology and Evolution

RNA Research and SplicingRNA and protein synthesis mechanisms

Cited by 240

Testing the theory of evolution by comparing phylogenetic trees constructed from five different protein sequences

Penny, D., Foulds, L. R., & Hendy, M. D. (1982) · Nature

Genomics and Phylogenetic StudiesEvolution and Paleontology Studies

Cited by 213

The Power of Relative Rates Tests Depends on the Data

Bromham, L., Penny, D., Rambaut, A., & Hendy, M. D. (2000) · Journal of Molecular Evolution

Genomics and Phylogenetic StudiesEvolution and Paleontology Studies

Cited by 168

The nature of the last universal common ancestor

Penny, D., & Poole, A. (1999) · Current Opinion in Genetics & Development

Origins and Evolution of LifeRNA and protein synthesis mechanisms

Cited by 162

Testing the Cambrian explosion hypothesis by using a molecular dating technique

Bromham, L., Rambaut, A., Fortey, R., Cooper, A., & Penny, D. (1998) · Proceedings of the National Academy of Sciences

Evolution and Paleontology StudiesMarine Invertebrate Physiology and Ecology

Cited by 148

Growing up with dinosaurs: molecular dates and the mammalian radiation

Bromham, L., Phillips, M. J., & Penny, D. (1999) · Trends in Ecology & Evolution

Evolution and Paleontology StudiesPaleontology and Evolutionary Biology

Cited by 127

Untangling Oceanic settlement: the edge of the knowable

Hurles, M. E., Matisoo-Smith, E., Gray, R. D., & Penny, D. (2003) · Trends in Ecology & Evolution

Pacific and Southeast Asian StudiesLanguage and cultural evolution

Cited by 118

RNA Folding Argues Against a Hot-Start Origin of Life

Moulton, V., Gardner, P. P., Pointon, R. F., Creamer, L. K., Jameson, G. B., & Penny, D. (2000) · Journal of Molecular Evolution

Origins and Evolution of LifeRNA and protein synthesis mechanisms

Cited by 56

Spectral Analysis, Systematic Bias, and the Evolution of Chloroplasts

Lockhart, P. J., Howe, C. J., Barbrook, A. C., Larkum, A., & Penny, D. (1999) · Molecular Biology and Evolution

Photosynthetic Processes and MechanismsProtist diversity and phylogeny

Cited by 50

Testing fundamental evolutionary hypotheses

Penny, D., Hendy, M. D., & Poole, A. M. (2003) · Journal of Theoretical Biology

Philosophy of Biology and Scientific ExplanationEvolution and Science Education

Cited by 24