Optimal Heck Cross‐Coupling Catalysis: A Pseudo‐Pharmaceutical Approach
Open accessAbstract
The problem of predicting the activity of ligands and solvents in homogeneous catalysis is addressed. A systematic selection method for ligands and solvents is presented, using a combination of stereoelectronic and electrotopological descriptors to describe the ligands and solvents in a set of 500 Heck reactions. Libraries of ‘virtual ligands’ and ‘virtual solvents’ are projected on the reaction space, and their reactivity is then predicted using multivariate models. The applications of this approach to combinatorial catalysis and reducing the amount of ‘garbage data’ are discussed.
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Low-cost, topological, three-dimensional, one-hot chemical encoding, and geometric descriptors are often employed for this purpose in transition-metal chemistry.
“Low-cost, topological (5, 7, 32, 92-94), three-dimensional (95-100), one-hot chemical encoding (92, 101), and geometric (e.g., for MOF pores) (102-104) descriptors are often employed for this purpose in transition-metal chemistry.”
From Machine Learning for the Discovery, Design, and Engineering of Materials. (2022) · cites this paper as [5]
In “Choosing and Calculating the Reaction Descriptors” (page unavailable), the paper says descriptors should be simple to calculate and may use atom or fragment counts; it applies descriptors to Heck cross-coupling catalysis. It does not establish that topological descriptors specifically are often employed in transition-metal chemistry. This citation is attached to the topological-descriptor portion of the sentence, not the separately cited one-hot or MOF descriptors. (LLM, conf=0.78)
Experimental — accuracy not yet measuredAlthough descriptors and representations have evolved with the increasing use of more sophisticated ML models in recent years, demonstrations in the early 2000s bear striking similarity to many modern applications.
“Although descriptors and representations have evolved with the increasing use of more sophisticated ML models in recent years, demonstrations in the early 2000s (5-8, 42) bear striking similarity to many modern applications (32,43,(72)(73)(74).”
From Machine Learning for the Discovery, Design, and Engineering of Materials. (2022) · cites this paper as [5]
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- Authors
- Burello, E., & Rothenberg, G.
- Affiliations
- University of Amsterdam (NL)
- ORCID
- Rothenberg, Gadi
- Venue
- Advanced Synthesis & Catalysis
- Publisher
- Wiley
- Published
- 2003-12
- Volume
- 345
- Issue
- 12
- Pages
- 1334-1340
- ISSN
- 1615-4150 (ISSN-L)
- 1615-4169
- OpenAlex
- W2062637662
- Cited by
- 39
- References
- 39
- Citations by year
- 2024: 1 · 2022: 3 · 2021: 3 · 2019: 1 · 2017: 3 · 2016: 1 · 2015: 1 · 2014: 2 · 2013: 2 · 2012: 5
- FWCI
- 2.12
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Advanced Synthesis & Catalysis (publishedVersion)
- Topics
- Physical Sciences › Chemistry › Organic Chemistry › Catalytic Cross-Coupling Reactions
- Physical Sciences › Computer Science › Computational Theory and Mathematics › Computational Drug Discovery Methods
- Physical Sciences › Materials Science › Materials Chemistry › Machine Learning in Materials Science
- Keywords
- Heck reaction, homogeneous catalysis, ligand selection, solvent selection, reaction space, multivariate models, combinatorial catalysis, catalyst activity prediction
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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