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Longitudinal MRI brain studies in live adult zebrafish

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Effective R2 relaxation rate, derived from dual-contrast fast-spin-echo MRI, enables detection of hemisphere differences in iron level and dopamine function in Parkinson’s disease and healthy individuals

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Incorporating the effect of white matter microstructure in the estimation of magnetic susceptibility in ex vivo mouse brain

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Comparison of histological procedures and antigenicity of human post-mortem brains fixed with solutions used in gross anatomy laboratories

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Three‐dimensional NMR microscopy of zebrafish specimens

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Antigenicity is preserved with fixative solutions used in human gross anatomy: A mice brain immunohistochemistry study

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Demonstration of Human Fetal Bone Morphology with MR Imaging: A Preliminary Study

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Imaging of the human subthalamic nucleus

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Neutralizing RGMa with Elezanumab Promotes Cerebroprotection and Recovery in Rabbit Middle Cerebral Artery Occlusion

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Imaging multiple sclerosis pathology at 160 μm isotropic resolution by human whole-brain ex vivo magnetic resonance imaging at 3 T

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Influence of water based embedding media composition on the relaxation properties of fixed tissue

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Changes in magnetic resonance imaging relaxation time on postmortem magnetic resonance imaging of formalin-fixed human normal heart tissue

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Protocol for 3D virtual histology of unstained human brain tissue using synchrotron radiation phase-contrast microtomography

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Ultrasound and magnetic resonance imaging for the detection of blood: An ex‐vivo study

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Axonal T2 estimation using the spherical variance of the strongly diffusion-weighted MRI signal

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Toward an optimal cadaveric brain model for neurosurgical education: assessment of preservation, parenchyma, vascular injection, and imaging

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Investigating microstructural changes between in vivo and perfused ex vivo marmoset brains using oscillating gradient and b‐tensor encoded diffusion MRI at 9. 4 T

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Multi-omics validation of myelin water fraction as a myelin-specific MRI biomarker

Bae, J., Joynes, C. M., Gong, Z., Duggan, M. R., Walker, K. A., & Bouhrara, M. (2026) · NeuroImage · doi:10.1016/j.neuroimage.2026.121852 · Cited by 6 · see citing works

Susceptibility-induced internal gradients reveal axon morphology and cause anisotropic effects in the diffusion-weighted MRI signal

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MR imaging for the quantitative assessment of brain iron in aceruloplasminemia: A postmortem validation study

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Corrigendum: Histological Correlates of Diffusion-Weighted Magnetic Resonance Microscopy in a Mouse Model of Mesial Temporal Lobe Epilepsy

Göbel‐Guéniot, K., Gerlach, J., Kamberger, R., Leupold, J., von Elverfeldt, D., Hennig, J., Korvink, J. G., Haas, C. A., & LeVan, P. (2020) · Frontiers in Neuroscience · doi:10.3389/fnins.2020.00806 · Cited by 6 · see citing works

Effects of fixatives on histomagnetic evaluation of iron in rodent spleen

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The Brainbox—a tool to facilitate correlation of brain magnetic resonance imaging features to histopathology

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Improved method for MR microscopy of brain tissue cultured with the interface method combined with Lenz lenses

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Comparative analysis of in situ and ex situ postmortem brain MRI : Evaluating volumetry, DTI , and relaxometry

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Identification of diffusion, kurtosis, and propagator MRI markers of Alzheimer’s disease pathology in post-mortem human tissue

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Deposits of iron oxides in the humanglobus pallidus

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Ultra-high-resolution mapping of myelin and g-ratio in a panel of Mbp enhancer-edited mouse strains using microstructural MRI

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ProbaStem, a pipeline towards the first high-resolution probabilistic atlas of the whole human brainstem

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Chaos and COSMOS—Considerations on QSM methods with multiple and single orientations and effects from local anisotropy

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Post-mortem Examination of the Nervous System: Fresh versus Fixed

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Off‐resonance saturation as an MRI method to quantify mineral‐ iron in the post‐mortem brain

Bossoni, L., Hegeman-Kleinn, I. M., van Duinen, S. G., Bulk, M., Vroegindeweij, L. H. P., Langendonk, J. G., Hirschler, L., WEBB, A. G., & van der Weerd, L. (2021) · Magnetic Resonance in Medicine · doi:10.1002/mrm.29041 · Cited by 2 · see citing works

Longitudinal quantitative MRI of whole human brains during formaldehyde immersion, PBS wash-out, and tissue volume changePreprint

Fritz, F. J., Streubel, T., Mordhorst, L., Lüthi, N., Edwards, L., Mushumba, H., Püschel, K., Weiskopf, N., Kirilina, E. P., & Mohammadi, S. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.01.31.702882 · Cited by 3 · see citing works

Bridging mesoscopic and microscopic scales in multiple sclerosis: Post mortem brain block multi-contrast 9.4T MRI and histology quantification

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Empirical relationship between TEM-derived myelin volume fraction and MRI-R2 values in aging ex vivo rat corpus callosum

Cho, H., Han, S., & Cho, H. J. (2023) · Magnetic Resonance Imaging · doi:10.1016/j.mri.2023.07.006 · Cited by 2 · see citing works

Quantification of cortical damage in multiple sclerosis using DTI remains a challenge

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Conteúdo de íons paramagnéticos no cérebro e sua correlação com mapas quantitativos de ressonância magnética

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Susceptibility-induced internal gradients reveal axon morphology and cause anisotropic effects in the dMRI signalPreprint

Winther, S., Lundell, H., Rafael‐Patiño, J., Andersson, M., Thiran, J., & Dyrby, T. B. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.05.01.538981 · Cited by 2 · see citing works

Lifespan trajectory of chimpanzee brains characterized by magnetic resonance imaging histologyPreprint

Lipp, I., Kirilina, E. P., Jäger, C., Morawski, M., Jauch, A. S., Pine, K., Edwards, L. J., Helbling, S., Rose, D., Helms, G., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.12.06.627145 · Cited by 2 · see citing works

A postmortem high-resolution MRI study of the development of cochlear nerve-related structures in the second and third trimesters of pregnancy

Zhao, H., Sun, L., Xiao, L., Wang, L., Hu, N., Miao, M., Ginat, D. T., Mallio, C. A., & Lin, X. (2024) · Quantitative Imaging in Medicine and Surgery · doi:10.21037/qims-24-626 · Cited by 1 · see citing works

Analytical Dual Flip Angle R1 Calculation Outside the Small‐Angle Regime

Edwards, L., Pine, K., Lipp, I., Kirilina, E. P., Helms, G., & Weiskopf, N. (2025) · Magnetic Resonance in Medicine · doi:10.1002/mrm.70174 · Cited by 1 · see citing works

Effects of Postmortem Intervals on Quantitative MRI in Unfixed and Fixed Swine Brain: Implications for Ex Vivo MRI Applications

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An improved anatomical MRI technique with suppression of fixative fluid artifacts for the investigation of human postmortem brain phantoms

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Ex vivo ultra-high field magnetic resonance imaging of human epileptogenic specimens from primarily the temporal lobe: A systematic review

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Quantitative susceptibility mapping and R1 measurement: Determination of the myelin volume fraction in the aging ex vivo rat corpus callosum

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Longitudinal brain studies in adult zebrafish by MRIPreprint

Hamilton, N., Allen, C. E., & Reynolds, S. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.06.09.495545 · Cited by 1 · see citing works

Characterising the temporal evolution of fixation in human post mortem brain via linear relaxometry modelling – a marker of cross-linking?

Mohammadi, S., Papazoglou, S., Mushumba, H., Ashtarayeh, M., Püschel, K., Helms, G., Callaghan, M. F., Weiskopf, N., & Streubel, T. (2019) · Lund University Publications (Lund University)

Tools for quantitative MR imaging and spectroscopy for the improvement of therapy evaluation in oncology

van Houtum, Q. (2020) · doi:10.33540/52

Structural and diffusion magnetic resonance imaging in mitochondrial disease : validation, optimisation, and implementation

Hossain, C. L. (2019)

MRI quantification of multiple sclerosis pathology

Ouellette, R. (2021) · Figshare

Charting human subcortical maturation across the adult lifespan with in vivo 7 T MRIPreprint

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Imaging

Folkerth, R. D. (2021) · Cambridge University Press eBooks · doi:10.1017/9781316671863.003

Quantification of paramagnetic ions in human brain tissue: correlation to quantitative magnetic resonance imaging

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Quantifying brain microstructure using MRI

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Multi-atlas multi-modality morphometry analysis of the South Texas Alzheimer’s Disease Research Center postmortem repository

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Multiparametric MRI Can Detect Enhanced Myelination in the Ex Vivo Gli1−/− Mouse Brain

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Multi-compartment diffusion–relaxation MR signal representation in the spherical 3D-SHORE basis

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Effects of concentration and vendor specific composition of formalin on postmortem MRI of the human brain

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Spatiotemporal trajectories of formaldehyde fixation effects on quantitative MRI in postmortem human brainsPreprint

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Quantitative Ex Vivo MRI Changes due to Progressive Formalin Fixation in Whole Human Brain Specimens: Longitudinal Characterization of Diffusion, Relaxometry, and Myelin Water Fraction Measurements at 3T

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Temperature Dependency of T1 Relaxation Time in Unfixed and Fixed Human Brain Tissue

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