The DOI matches its Crossref record; 7 of the 7 references it cites were found in a registry or an index.
MBD5 and MBD6 interact with the human PR‐DUB complex through their methyl‐CpG‐binding domain
Abstract
MBD5 and MBD6 are two members of the methyl‐CpG‐binding domain (MBD) family of proteins that are poorly characterized. Studies performed thus far have failed to show binding of the MBD5 and MBD6 MBD to methylated DNA. Here, we show that both MBD5 and MBD6 interact with the mammalian PR‐DUB Polycomb protein complex in a mutually exclusive manner. Strikingly, the MBD of MBD5 and MBD6 is both necessary and sufficient to mediate this interaction. Chromatin immunoprecipitation analyses reveal that MBD6 and FOXK2/PR‐DUB share a subset of genomic target genes, suggesting a functional interaction in vivo. Finally, we show that MBD6, but not MBD5, is recruited to sites of DNA damage in a PR‐DUB independent manner. Our study thus implies a shared function for MBD5 and MBD6 through an interaction with PR‐DUB, as well as an MBD6‐specific recruitment to sites of DNA damage.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Previous studies have identified MBD5 and MBD6 as partner proteins of PR-DUB, and their localization to heterochromatin appeared to be independent of DNA 5mC38,39.”
From RNA m5C oxidation by TET2 regulates chromatin state and leukaemogenesis (2024) · cites this paper as [39]
Citations
Cites
Vogelstein, B., Papadopoulos, N., Velculescu, V. E., Zhou, S., Diaz, L. A., & Kinzler, K. W. (2013) · Science · doi:10.1126/science.1235122 · Cited by 7,863
Global quantification of mammalian gene expression control
Schwanhäusser, B., Busse, D., Li, N., Dittmar, G., Schuchhardt, J., Wolf, J., Chen, W., & Selbach, M. (2011) · Nature · doi:10.1038/nature10098 · Cited by 6,566 · cited 1×
“For stoichiometry estimations, the iBAQ algorithm was used [18, 29].”
MethodThe DNA Damage Response: Ten Years After
Harper, J. W., & Elledge, S. J. (2007) · Molecular Cell · doi:10.1016/j.molcel.2007.11.015 · Cited by 1,705
Lewis, J. D., Meehan, R. R., Henzel, W. J., Maurer-Fogy, I., Jeppesen, P., Klein, F., & Bird, A. (1992) · Cell · doi:10.1016/0092-8674(92)90610-o · Cited by 1,371
Dynamic Readers for 5-(Hydroxy)Methylcytosine and Its Oxidized Derivatives
Spruijt, C. G., Gnerlich, F., Smits, A. H., Pfaffeneder, T., Jansen, P. W. T. C., Bauer, C., Münzel, M., Wagner, M., Müller, M., Khan, F., et al. (2013) · Cell · doi:10.1016/j.cell.2013.02.004 · Cited by 973
Self-citationThe deubiquitinating enzyme BAP1 regulates cell growth via interaction with HCF-1
Machida, Y. J., Machida, Y., Vashisht, A. A., Wohlschlegel, J. A., & Dutta, A. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m109.046755 · Cited by 274
Smits, A. H., Jansen, P. W. T. C., Poser, I., Hyman, A. A., & Vermeulen, M. (2013) · Nucleic Acids Research · doi:10.1093/nar/gks941 · Cited by 258
Self-citation
Research works printed but not linked: 38
- 10.1016/S0168-9525(03)00080-5 · DOI
- 10.1016/j.jmb.2011.01.056 · DOI
- 10.1016/B978-0-12-387685-0.00012-3 · DOI
- 10.7554/eLife.00726 · DOI · Paper page
- 10.1093/nar/21.21.4886 · DOI
- 10.1093/bfgp/elr040 · DOI
- 10.1371/journal.pone.0011982 · DOI · Paper page
- 10.1002/ajmg.a.35235 · DOI
- 10.1371/journal.pone.0047358 · DOI
- 10.1038/nature08966 · DOI · Paper page
- 10.1016/j.cell.2009.04.042 · DOI
- 10.1126/science.1221711 · DOI
- 10.1128/MCB.00396-10 · DOI
- 10.1007/978-1-62703-284-1_11 · DOI
- 10.1371/journal.pone.0070035 · DOI
- 10.1038/nbt.1511 · DOI · Paper page
- 10.1038/nmeth.1199 · DOI
- 10.1038/nrc3459 · DOI · Paper page
- 10.1093/nar/gkr1057 · DOI
- 10.1016/j.molcel.2006.03.028 · DOI
- 10.1186/gb-2013-14-10-r119 · DOI
- Yang Q., 2000, The winged‐helix/forkhead protein myocyte nuclear factor beta (MNF‐beta) forms a co‐repressor complex with mammalian sin3B, Biochem. J., 345, 335, 10.1042/bj3450335 · DOI
- 10.1007/s11010-012-1302-2 · DOI
- 10.1042/BJ20120563 · DOI
- 10.1074/jbc.M110.154005 · DOI
- 10.1128/MCB.05504-11 · DOI
- 10.1016/j.biocel.2008.09.016 · DOI
- 10.1007/s12013-013-9635-3 · DOI
- 10.1073/pnas.1309085110 · DOI
- Carbone M., 2012, BAP1 cancer syndrome: malignant mesothelioma, uveal and cutaneous melanoma, and MBAITs, J. Transl. Med., 10
- 10.1038/ng.2323 · DOI
- 10.1038/leu.2012.288 · DOI
- 10.1128/MCB.01517-08 · DOI
- 10.1007/s12013-011-9184-6 · DOI
- 10.1093/nar/26.19.4413 · DOI
- 10.1016/B978-0-12-387685-0.00002-0 · DOI
- 10.1074/jbc.M203455200 · DOI
- 10.1016/j.ajhg.2012.05.003 · DOI
Cited by
Methyl-cpG-binding domain proteins: readers of the epigenome
Du, Q., Luu, P.-L., Stirzaker, C., & Clark, S. J. (2015) · Epigenomics · doi:10.2217/epi.15.39 · Cited by 544
Kloet, S. L., Baymaz, H. I., Makowski, M., Groenewold, V., Jansen, P. W. T. C., Berendsen, M., Niazi, H., Kops, G. J., & Vermeulen, M. (2015) · The FEBS Journal · doi:10.1111/febs.12972 · Cited by 107
Self-citationRNA m5C oxidation by TET2 regulates chromatin state and leukaemogenesis
Zou, Z., Dou, X., Li, Y., Zhang, Z., Wang, J., Gao, B., Xiao, Y., Wang, Y., Zhao, L., Sun, C., et al. (2024) · Nature · doi:10.1038/s41586-024-07969-x · Cited by 103
Metadata
- Authors
- Baymaz, H. I., Fournier, A., Laget, S., Ji, Z., Jansen, P. W. T. C., Smits, A. H., Ferry, L., Mensinga, A., Poser, I., Sharrocks, A., Defossez, P., & Vermeulen, M.
- Venue
- PROTEOMICS
- Publisher
- Wiley
- Published
- 2014-04-24
- Volume
- 14
- Issue
- 19
- Pages
- 2179-2189
- ISSN
- 1615-9853
- 1615-9861
- Cited by
- 109
- References
- 7
- Language
- en
- Funders
- Vermeulen and Marc Timmers's groups and Berend Snel for fruitful discussions
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: MBD5 and MBD6 interact with the human PR‐DUB complex through their methyl‐CpG‐binding domain. https://app.cochat.ai/papers/10.1002/pmic.201400013
- The paper
- Baymaz, H. I., Fournier, A., Laget, S., Ji, Z., Jansen, P. W. T. C., Smits, A. H., Ferry, L., Mensinga, A., Poser, I., Sharrocks, A., Defossez, P., & Vermeulen, M. (2014). MBD5 and MBD6 interact with the human PR‐DUB complex through their methyl‐CpG‐binding domain. PROTEOMICS. https://doi.org/10.1002/pmic.201400013