ggplot2: Elegant Graphics for Data Analysis

Discrepancies in autologous bone marrow stem cell trials and enhancement of ejection fraction (DAMASCENE): weighted regression and meta-analysis

Nowbar, A. N., Mielewczik, M., Karavassilis, M. E., Dehbi, H., Shun-Shin, M. J., Jones, S. H., Howard, J. P., Cole, G. D., Francis, D. P., & on behalf of the DAMASCENE writing group (2014) · BMJ · doi:10.1136/bmj.g2688 · Cited by 215

Antibiotic treatment enhances the genome-wide mutation rate of target cells

Long, H., Miller, S. F., Strauss, C., Zhao, C., Cheng, L., Ye, Z., Griffin, K. E., Te, R., Lee, H., Chen, C., et al. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1601208113 · Cited by 204

IL-33-induced metabolic reprogramming controls the differentiation of alternatively activated macrophages and the resolution of inflammation

Faas, M., Ipseiz, N., Ackermann, J. A., Culemann, S., Grüneboom, A., Schröder, F., Rothe, T., Scholtysek, C., Eberhardt, M., Böttcher, M., et al. (2021) · Immunity · doi:10.1016/j.immuni.2021.09.010 · Cited by 206

The underappreciated diversity of bile acid modifications

Mohanty, I., Mannochio-Russo, H., Schweer, J. V., Abiead, Y. E., Bittremieux, W., Xing, S., Schmid, R., Zuffa, S., Vasquez, F. J. D. A., Muti, V. B., et al. (2024) · Cell · doi:10.1016/j.cell.2024.02.019 · Cited by 211

Limited dissemination of the wastewater treatment plant core resistome

Munck, C., Albertsen, M., Telke, A. A., Ellabaan, M. M. H., Nielsen, P. H., & Sommer, M. O. A. (2015) · Nature Communications · doi:10.1038/ncomms9452 · Cited by 207

Specific features of NDVI, NDWI and MNDWI as reflected in land cover categories

Szabó, S., Gácsi, Z., & Bertalan-Balázs, B. (2016) · Landscape & Environment · doi:10.21120/le/10/3-4/13 · Cited by 207

Phylogenomic and ecological analyses reveal the spatiotemporal evolution of global pines

Jin, W., Gernandt, D. S., Wehenkel, C., Xia, X., Wei, X., & Wang, X. (2021) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2022302118 · Cited by 214

Myc Regulates Chromatin Decompaction and Nuclear Architecture during B Cell Activation

Kieffer-Kwon, K.-R., Nimura, K., Rao, S. S. P., Xu, J., Jung, S., Pękowska, A., Dose, M., Stevens, E., Mathé, E. A., Dong, P., et al. (2017) · Molecular Cell · doi:10.1016/j.molcel.2017.07.013 · Cited by 210

Impacts of Neanderthal-Introgressed Sequences on the Landscape of Human Gene Expression

McCoy, R. C., Wakefield, J., & Akey, J. M. (2017) · Cell · doi:10.1016/j.cell.2017.01.038 · Cited by 200

The Evolution of Fungal Metabolic Pathways

Wisecaver, J. H., Slot, J. C., & Rokas, A. (2014) · PLoS Genetics · doi:10.1371/journal.pgen.1004816 · Cited by 205

Antibiotic treatment for Tuberculosis induces a profound dysbiosis of the microbiome that persists long after therapy is completed

Wipperman, M. F., Fitzgerald, D. W., Juste, M. A. J., Taur, Y., Namasivayam, S., Sher, A., Bean, J. M., Bucci, V., & Glickman, M. S. (2017) · Scientific Reports · doi:10.1038/s41598-017-10346-6 · Cited by 213

Human sperm displays rapid responses to diet

Nätt, D., Kugelberg, U. Ö., Casas, E., Nedstrand, E., Zalavary, S., Henriksson, P., Nijm, C., Jäderquist, J., Sandborg, J., Flinke, E., et al. (2019) · PLoS Biology · doi:10.1371/journal.pbio.3000559 · Cited by 210

Peatland protection and restoration are key for climate change mitigation

Humpenöder, F., Karstens, K., Lotze‐Campen, H., Leifeld, J., Menichetti, L., Barthelmes, A., & Popp, A. (2020) · Environmental Research Letters · doi:10.1088/1748-9326/abae2a · Cited by 205

VOLCANO PLOTS IN ANALYZING DIFFERENTIAL EXPRESSIONS WITH mRNA MICROARRAYS

Li, W. (2012) · Journal of Bioinformatics and Computational Biology · doi:10.1142/s0219720012310038 · Cited by 216

Platelet TGF-β1 contributions to plasma TGF-β1, cardiac fibrosis, and systolic dysfunction in a mouse model of pressure overload

Meyer, A., Wang, W., Qu, J., Croft, L. B., Degen, J. L., Coller, B. S., & Ahamed, J. (2011) · Blood · doi:10.1182/blood-2011-09-377648 · Cited by 204

Contributions of cuticle permeability and enzyme detoxification to pyrethroid resistance in the major malaria vector Anopheles gambiae

Yahouédo, G. A., Chandre, F., Rossignol, M., Ginibre, C., Balabanidou, V., Mendez, N. G. A., Pigeon, O., VONTAS, J. G., & Cornélie, S. (2017) · Scientific Reports · doi:10.1038/s41598-017-11357-z · Cited by 204

Microplastics: New substrates for heterotrophic activity contribute to altering organic matter cycles in aquatic ecosystems

Arias-Andrés, M., Kettner, M. T., Miki, T., & Grossart, H. (2018) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2018.04.199 · Cited by 207

Pregnancy-related changes in the maternal gut microbiota are dependent upon the mother's periconceptional diet

Gohir, W., Whelan, F. J., Surette, M. G., Moore, C., Schertzer, J. D., & Sloboda, D. M. (2015) · Gut Microbes · doi:10.1080/19490976.2015.1086056 · Cited by 203

Genome-wide association study identifies a new susceptibility locus for cleft lip with or without a cleft palate

Sun, Y., Huang, Y., Yin, A., Pan, Y., Wang, Y., Wang, C., Du, Y., Wang, M., Lan, F., Hu, Z., et al. (2015) · Nature Communications · doi:10.1038/ncomms7414 · Cited by 205

The word frequency effect in first- and second-language word recognition: A lexical entrenchment account

Diependaele, K., Lemhöfer, K., & Brysbaert, M. (2012) · Quarterly Journal of Experimental Psychology · doi:10.1080/17470218.2012.720994 · Cited by 199

Rapid publication-ready MS-Word tables for one-way ANOVA

Assaad, H., Zhou, L. F., Carroll, R. J., & Wu, G. (2014) · SpringerPlus · doi:10.1186/2193-1801-3-474 · Cited by 203

Discovery of a novel methanogen prevalent in thawing permafrost

Mondav, R., Woodcroft, B. J., Kim, E., Mccalley, C. K., Hodgkins, S. B., Crill, P., Chanton, J. P., Hurst, G. B., VerBerkmoes, N. C., SALESKA, S. R., et al. (2014) · Nature Communications · doi:10.1038/ncomms4212 · Cited by 213

Is Host Filtering the Main Driver of Phylosymbiosis across the Tree of Life?

Mazel, F., Davis, K. M., Loudon, A. H., Kwong, W. K., Groussin, M., & Parfrey, L. W. (2018) · mSystems · doi:10.1128/msystems.00097-18 · Cited by 218

Antisense oligonucleotide modulation of non-productive alternative splicing upregulates gene expression

Lim, K., Zhou, H., Jeon, H. Y., Kach, J., Jing, E., Weyn‐Vanhentenryck, S. M., Downs, M., Corrionero, A., Oh, R. S., Scharner, J., et al. (2020) · Nature Communications · doi:10.1038/s41467-020-17093-9 · Cited by 216

Oxidative changes and signalling pathways are pivotal in initiating age-related changes in articular cartilage

Hui, W., Young, D. A., Rowan, A. D., Xu, X., Cawston, T. E., & Proctor, C. J. (2014) · Annals of the Rheumatic Diseases · doi:10.1136/annrheumdis-2014-206295 · Cited by 205

A comparison of network and clustering methods to detect biogeographical regions

Mannix, E., Knerr, N. J., & Encinas‐Viso, F. (2017) · Ecography · doi:10.1111/ecog.02596 · Cited by 202

Screening drug effects in patient‐derived cancer cells links organoid responses to genome alterations

Jabs, J., Zickgraf, F. M., Park, J., Wagner, S., Jiang, X., Jechow, K., Kleinheinz, K., Toprak, U. H., Schneider, M. A., Meister, M. A., et al. (2017) · Molecular Systems Biology · doi:10.15252/msb.20177697 · Cited by 209

Genetic risk for autoimmunity is associated with distinct changes in the human gut microbiome

Russell, J. T., Roesch, L. F. W., Ördberg, M., Ilonen, J., Atkinson, M. A., Schatz, D., Triplett, E. W., & Ludvigsson, J. (2019) · Nature Communications · doi:10.1038/s41467-019-11460-x · Cited by 200

Influence of plant genotype and soil on the wheat rhizosphere microbiome: evidences for a core microbiome across eight African and European soils

Simonin, M., Dasilva, C., Terzi, V., Ngonkeu, E. L. M., Diouf, D., Kane, A., Béna, G., & Moulin, L. (2020) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiaa067 · Cited by 212

Transcriptome-wide profiles of circular RNA and RNA-binding protein interactions reveal effects on circular RNA biogenesis and cancer pathway expression

Okholm, T. L. H., Sathe, S., Park, S. S., Kamstrup, A. B., Rasmussen, A. M., Shankar, A., Chua, Z. M., Fristrup, N., Nielsen, M. M., Vang, S., et al. (2020) · Genome Medicine · doi:10.1186/s13073-020-00812-8 · Cited by 204

Plant mixture balances terrestrial ecosystem C:N:P stoichiometry

Chen, X., & Chen, H. Y. H. (2021) · Nature Communications · doi:10.1038/s41467-021-24889-w · Cited by 208

Gramm: grammar of graphics plotting in Matlab

Morel, P. (2018) · The Journal of Open Source Software · doi:10.21105/joss.00568 · Cited by 202

Evidence of recombination in coronaviruses implicating pangolin origins of nCoV-2019Preprint

Wong, M. C., Cregeen, S. J., Ajami, N. J., & Petrosino, J. F. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.02.07.939207 · Cited by 207

Multibatch TMT reveals false positives, batch effects and missing values

Brenes, A., Hukelmann, J., Bensaddek, D., & Lamond, A. I. (2019) · Molecular & Cellular Proteomics · doi:10.1074/mcp.ra119.001472 · Cited by 196

Fate-Mapping of GM-CSF Expression Identifies a Discrete Subset of Inflammation-Driving T Helper Cells Regulated by Cytokines IL-23 and IL-1β

Komuczki, J., Tuzlak, S., Friebel, E., Hartwig, T., Spath, S., Rosenstiel, P., Waisman, A., Opitz, L., Oukka, M., Schreiner, B., et al. (2019) · Immunity · doi:10.1016/j.immuni.2019.04.006 · Cited by 201

Induced Pluripotent Stem Cell Differentiation Enables Functional Validation of GWAS Variants in Metabolic Disease

Warren, C. R., O’Sullivan, J. F., Friesen, M., Becker, C. E., Zhang, X., Liu, P., Wakabayashi, Y., Morningstar, J. E., Shi, X., Choi, J., et al. (2017) · Cell stem cell · doi:10.1016/j.stem.2017.01.010 · Cited by 191

Evaluation of An Activities of Daily Living Scale for Adolescents and Adults with Developmental Disabilities

Maenner, M. J., Smith, L. E., Hong, J., Makuch, R., Greenberg, J. S., & Mailick, M. R. (2013) · Disability and Health Journal · doi:10.1016/j.dhjo.2012.08.005 · Cited by 198

Social-Emotional Learning Program to Reduce Bullying, Fighting, and Victimization Among Middle School Students With Disabilities

Espelage, D. L., Rose, C. A., & Polanin, J. R. (2015) · Remedial and Special Education · doi:10.1177/0741932514564564 · Cited by 200

A differentially regulated AP 2/ ERF transcription factor gene cluster acts downstream of a MAP kinase cascade to modulate terpenoid indole alkaloid biosynthesis in Catharanthus roseus

Paul, P., Singh, S. K., Patra, B., Sui, X., Pattanaik, S., & Yuan, L. (2016) · New Phytologist · doi:10.1111/nph.14252 · Cited by 200

Influence of geolocation and ethnicity on the phenotypic expression of primary Sjögren's syndrome at diagnosis in 8310 patients: a cross-sectional study from the Big Data Sjögren Project Consortium

Brito‐Zerón, P., Acar‐Denizli, N., Zeher, M., Rasmussen, A., Séror, R., Theander, E., Li, X., Baldini, C., Gottenberg, J., Danda, D., et al. (2016) · Annals of the Rheumatic Diseases · doi:10.1136/annrheumdis-2016-209952 · Cited by 209

Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague

Spyrou, M. A., Ильгизовна, Т. Р., Wang, C., Valtueña, A. A., Lankapalli, A. K., Кондрашин, В. В., Tsybin, V. A., Khokhlov, A. A., Kühnert, D., Herbig, A., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-04550-9 · Cited by 209

Illumina TruSeq Synthetic Long-Reads Empower De Novo Assembly and Resolve Complex, Highly-Repetitive Transposable Elements

McCoy, R. C., Taylor, R. W., Blauwkamp, T. A., Kelley, J. L., Kertesz, M., Pushkarev, D., Petrov, D. A., & Fiston-Lavier, A.-S. (2014) · PLoS ONE · doi:10.1371/journal.pone.0106689 · Cited by 206

Proposal of a Taxonomic Nomenclature for the Bacillus cereus Group Which Reconciles Genomic Definitions of Bacterial Species with Clinical and Industrial Phenotypes

Carroll, L. M., Wiedmann, M., & Kovač, J. (2020) · mBio · doi:10.1128/mbio.00034-20 · Cited by 200

The Effects of Soil Depth on the Structure of Microbial Communities in Agricultural Soils in Iowa (United States)

Hao, J., Chai, Y. N., Lopes, L. D., Ordóñez, R. A., Wright, E. E., Archontoulis, S. V., & Schachtman, D. P. (2020) · Applied and Environmental Microbiology · doi:10.1128/aem.02673-20 · Cited by 215

Bottom trawl surveys in the northern Bering Sea indicate recent shifts in the distribution of marine species

Stevenson, D. E., & Lauth, R. R. (2018) · Polar Biology · doi:10.1007/s00300-018-2431-1 · Cited by 206

Urban street tree biodiversity and antidepressant prescriptions

Marselle, M. R., Bowler, D. E., Watzema, J., Eichenberg, D., Kirsten, T., & Bonn, A. (2020) · Scientific Reports · doi:10.1038/s41598-020-79924-5 · Cited by 226

Variation among intact tissue samples reveals the core transcriptional features of human CNS cell classes

Kelley, K. W., Nakao-Inoue, H., Molofsky, A. V., & Oldham, M. C. (2018) · Nature Neuroscience · doi:10.1038/s41593-018-0216-z · Cited by 198

KNIME for reproducible cross-domain analysis of life science data

Fillbrunn, A., Dietz, C., Pfeuffer, J., Rahn, R., Landrum, G. A., & Berthold, M. R. (2017) · Journal of Biotechnology · doi:10.1016/j.jbiotec.2017.07.028 · Cited by 206

The Diversity, Structure, and Function of Heritable Adaptive Immunity Sequences in the Aedes aegypti Genome

Whitfield, Z. J., Dolan, P., Kunitomi, M., Tassetto, M., Seetin, M. G., Oh, S. D., Heiner, C. R., Paxinos, E. E., & Andino, R. (2017) · Current Biology · doi:10.1016/j.cub.2017.09.067 · Cited by 193

Measurements of translation initiation from all 64 codons in E. coli

Hecht, A., Glasgow, J. E., Jaschke, P. R., Bawazer, L. A., Munson, M. S., Cochran, J. R., Endy, D., & Salit, M. (2017) · Nucleic Acids Research · doi:10.1093/nar/gkx070 · Cited by 210

Towards integrating personalized feedback research into clinical practice: Development of the Trier Treatment Navigator (TTN)

Lutz, W., Rubel, J. A., Schwartz, B., Schilling, V., & Deisenhofer, A.-K. (2019) · Behaviour Research and Therapy · doi:10.1016/j.brat.2019.103438 · Cited by 196

Cell cycle staging of individual cells by fluorescence microscopy

Roukos, V., Pegoraro, G., Voss, T. C., & Misteli, T. (2015) · Nature Protocols · doi:10.1038/nprot.2015.016 · Cited by 195

Estimating long‐term multivariate progression from short‐term data

Donohue, M. C., Jacqmin‐Gadda, H., Le Goff, M., Thomas, R. G., Raman, R., Gamst, A. C., Beckett, L. A., Jack, C. R., Weiner, M. W., Dartigues, J., et al. (2014) · Alzheimer's & Dementia · doi:10.1016/j.jalz.2013.10.003 · Cited by 197

A pragmatic randomised multi-centre trial of multifamily and single family therapy for adolescent anorexia nervosa

Eisler, I., Simic, M., Hodsoll, J. P., Asen, E., Berelowitz, M., Connan, F., Ellis, G., Hugo, P., Schmidt, U. H., Treasure, J. L., et al. (2016) · BMC Psychiatry · doi:10.1186/s12888-016-1129-6 · Cited by 212

Bronze Age population dynamics and the rise of dairy pastoralism on the eastern Eurasian steppe

Jeong, C., Wilkin, S., Amgalantugs, T., Bouwman, A. S., Taylor, W. T. T., Hagan, R. W., Bromage, S., Tsolmon, S., Trachsel, C., Grossmann, J., et al. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1813608115 · Cited by 195

System-wide Profiling of RNA-Binding Proteins Uncovers Key Regulators of Virus Infection

García-Moreno, M., Noerenberg, M., Ni, S., Järvelin, A. I., González-Almela, E., Lenz, C. E., Bach‐Pages, M., Cox, V. A., Avolio, R., Davis, T., et al. (2019) · Molecular Cell · doi:10.1016/j.molcel.2019.01.017 · Cited by 197

Precision identification of diverse bloodstream pathogens in the gut microbiome

Tamburini, F. B., Andermann, T. M., Tkachenko, E., Senchyna, F., Banaei, N., & Bhatt, A. S. (2018) · Nature Medicine · doi:10.1038/s41591-018-0202-8 · Cited by 199

Networks of major depressive disorder: A systematic review

Malgaroli, M., Calderon, A., & Bonanno, G. A. (2021) · Clinical Psychology Review · doi:10.1016/j.cpr.2021.102000 · Cited by 211

Metabolome-microbiome signatures in the fermented beverage, Kombucha

Villarreal-Soto, S. A., Bouajila, J., Pace, M., Leech, J., Cotter, P. D., Souchard, J.-P., Taillandier, P., & Beaufort, S. (2020) · International Journal of Food Microbiology · doi:10.1016/j.ijfoodmicro.2020.108778 · Cited by 196

Biochemical Screening for Nonadherence Is Associated With Blood Pressure Reduction and Improvement in Adherence

Gupta, P., Patel, P., Štrauch, B., Lai, F. Y., Akbarov, A., Gulsin, G. S., Beech, A., Marešová, V., Topham, P. S., Stanley, A., et al. (2017) · Hypertension · doi:10.1161/hypertensionaha.117.09631 · Cited by 194

Field-Evolved Resistance in Corn Earworm to Cry Proteins Expressed by Transgenic Sweet Corn

Dively, G. P., Venugopal, P. D., & Finkenbinder, C. (2016) · PLoS ONE · doi:10.1371/journal.pone.0169115 · Cited by 194

Insights from modeling studies on how climate change affects invasive alien species geography

Bellard, C., Jeschke, J. M., Leroy, B., & Mace, G. M. (2018) · Ecology and Evolution · doi:10.1002/ece3.4098 · Cited by 208

Changes in air pollution during COVID-19 lockdown in Spain: A multi-city study

Briz‐Redón, Á., Belenguer-Sapiña, C., & Serrano‐Aroca, Á. (2020) · Journal of Environmental Sciences · doi:10.1016/j.jes.2020.07.029 · Cited by 202

Thoracic imaging tests for the diagnosis of COVID-19

Islam, N., Ebrahimzadeh, S., Salameh, J., Kazi, S., Fabiano, N., Treanor, L. M., Absi, M., Hallgrimson, Z., Leeflang, M., Hooft, L., et al. (2021) · Cochrane Database of Systematic Reviews · doi:10.1002/14651858.cd013639.pub4 · Cited by 202

Reciprocity explains food sharing in humans and other primates independent of kin selection and tolerated scrounging: a phylogenetic meta-analysis

Jaeggi, A. V., & Gurven, M. (2013) · Proceedings of the Royal Society B Biological Sciences · doi:10.1098/rspb.2013.1615 · Cited by 195

Association of MicroRNAs and YRNAs With Platelet Function

Kaudewitz, D., Skroblin, P., Bender, L. H., Barwari, T., Willeit, P., Pechlaner, R., Sunderland, N. P., Willeit, K., Morton, A. C., Armstrong, P. C. J., et al. (2015) · Circulation Research · doi:10.1161/circresaha.114.305663 · Cited by 196

Spatio-temporal estimation of the daily cases of COVID-19 in worldwide using random forest machine learning algorithm

Yeşilkanat, C. M. (2020) · Chaos Solitons & Fractals · doi:10.1016/j.chaos.2020.110210 · Cited by 197

Assessing ontogenetic maturity in extinct saurian reptiles

Griffin, C. T., Stocker, M. R., Colleary, C., Stefanic, C. M., Lessner, E. J., Riegler, M. S., Formoso, K. K., Koeller, K. L. M., & Nesbitt, S. J. (2020) · Biological reviews/Biological reviews of the Cambridge Philosophical Society · doi:10.1111/brv.12666 · Cited by 202

Impact of chromatin context on Cas9-induced DNA double-strand break repair pathway balance

Schep, R., Brinkman, E. K., Leemans, C., Vergara, X., van der Weide, R. H., Morris, B., van Schaik, T., Manzo, S. G., Peric‐Hupkes, D., van den Berg, J., et al. (2021) · Molecular Cell · doi:10.1016/j.molcel.2021.03.032 · Cited by 200

On the accuracy of ARIMA based prediction of COVID-19 spread

Alabdulrazzaq, H., Alenezi, M. N., Rawajfih, Y., AlGhannam, B. A., Al-Hassan, A. A., & Al–Anzi, F. S. (2021) · Results in Physics · doi:10.1016/j.rinp.2021.104509 · Cited by 195

spOccupancy: An R package for single‐species, multi‐species, and integrated spatial occupancy models

Doser, J. W., Finley, A. O., Kéry, M., & Zipkin, E. F. (2022) · Methods in Ecology and Evolution · doi:10.1111/2041-210x.13897 · Cited by 195

Adipose tissue derived bacteria are associated with inflammation in obesity and type 2 diabetes

Massier, L., Chakaroun, R., Tabei, S., Crane, A., Didt, K. D., Fallmann, J., von Bergen, M., Haange, S.-B., Heyne, H., Stumvoll, M., et al. (2020) · Gut · doi:10.1136/gutjnl-2019-320118 · Cited by 194

A Quantitative Genetic Basis for Leaf Morphology in a Set of Precisely Defined Tomato Introgression Lines

Chitwood, D. H., Kumar, R. S., Headland, L. R., Ranjan, A., Covington, M. F., Ichihashi, Y., Fulop, D., Jiménez‐Gómez, J. M., Peng, J., Maloof, J., et al. (2013) · The Plant Cell · doi:10.1105/tpc.113.112391 · Cited by 194

Ebola Virus Glycoprotein with Increased Infectivity Dominated the 2013–2016 Epidemic

Diehl, W. E., Lin, A. E., Grubaugh, N. D., Carvalho, L. M., Kim, K., Kyawe, P. P., McCauley, S. M., Donnard, E. R., Küçükural, A., McDonel, P. E., et al. (2016) · Cell · doi:10.1016/j.cell.2016.10.014 · Cited by 199

Synthetic spike-in standards for high-throughput 16S rRNA gene amplicon sequencing

Tourlousse, D. M., Yoshiike, S., Ohashi, A., Matsukura, S., Noda, N., & Sekiguchi, Y. (2016) · Nucleic Acids Research · doi:10.1093/nar/gkw984 · Cited by 190

Stunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa

Vonaesch, P., Morien, E., Andrianonimiadana, L., Sanke‐Waîgana, H., Mbecko, J., Huus, K. E., Naharimanananirina, T., Gondje, B. P., Nigatoloum, S. N., Vondo, S. S., et al. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1806573115 · Cited by 201

Human Thanatomicrobiome Succession and Time Since Death

Javan, G. T., Finley, S. J., Can, İ., Wilkinson, J. E., Hanson, J. D., & Tarone, A. M. (2016) · Scientific Reports · doi:10.1038/srep29598 · Cited by 210

The planktonic protist interactome: where do we stand after a century of research?

Bjorbækmo, M. F. M., Evenstad, A., Røsæg, L. L., Krabberød, A. K., & Logares, R. (2019) · The ISME Journal · doi:10.1038/s41396-019-0542-5 · Cited by 196

Web-TCGA: an online platform for integrated analysis of molecular cancer data sets

Deng, M. C.-H. K., Brägelmann, J., Schultze, J. L., & Perner, S. (2016) · BMC Bioinformatics · doi:10.1186/s12859-016-0917-9 · Cited by 191

Population Structure in the Model Grass Brachypodium distachyon Is Highly Correlated with Flowering Differences across Broad Geographic Areas

Tyler, L., Lee, S. J., Young, N. D., DeIulio, G. A., Benavente, E., Reagon, M., Sysopha, J., Baldini, R. M., Troìa, A., Hazen, S. P., et al. (2016) · The Plant Genome · doi:10.3835/plantgenome2015.08.0074 · Cited by 198

A fungal wheat pathogen evolved host specialization by extensive chromosomal rearrangements

Hartmann, F. E., Sánchez‐Vallet, A., McDonald, B. A., & Croll, D. (2017) · The ISME Journal · doi:10.1038/ismej.2016.196 · Cited by 188

Distinct Polysaccharide Utilization Determines Interspecies Competition between Intestinal Prevotella spp.

Gálvez, E. J. C., Iljazović, A., Amend, L., Lesker, T. R., Renault, T. T., Thiemann, S., Hao, L., Roy, U., Gronow, A., Charpentier, E., et al. (2020) · Cell Host & Microbe · doi:10.1016/j.chom.2020.09.012 · Cited by 191

Incongruence between gene trees and species trees and phylogenetic signal variation in plastid genes

Gonçalves, D. J. P., Simpson, B. B., Ortiz, E. M., Shimizu, G. H., & Jansen, R. K. (2019) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2019.05.022 · Cited by 189

Improved accuracy of lesion to symptom mapping with multivariate sparse canonical correlations

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ggplot2

Wickham, H. (2016) · Use R! · doi:10.1007/978-3-319-24277-4 · Cited by 34,873

Graphs with ggplot2

Ryan, C. (2021) · CRC Press eBooks · doi:10.1201/9781003106845-12

^DOWNLOAD E.B.O.O.K.# ggplot2: Elegant Graphics for Data Analysis (Use R!) Full PDF

PDF, ^. E. B. O. O. K. #. G. E. G. F. D. A. (. R. F. (2020) · Zenodo (CERN European Organization for Nuclear Research) · doi:10.5281/zenodo.4189363

DOWNLOAD in [PDF] ggplot2: Elegant Graphics for Data Analysis (Use R!) Full Pages

Pages, D. I. [. G. E. G. F. D. A. (. R. F. (2020) · Zenodo (CERN European Organization for Nuclear Research) · doi:10.5281/zenodo.4188991

Visualization with ggplot2

Paul, A. (2025) · Chapman & Hall/CRC eBooks · doi:10.1201/9781003423386-8