Assessing Inflammatory Disease at Mucosal Surfaces in Murine Genetic Models
Abstract
Inflammatory diseases of the mucosal surfaces are rising worldwide and particularly in the Western world that is witnessing unprecedented increases in the number and incidence of both asthma and inflammatory bowel disease. The laboratory mouse allows the application of the full panoply of modern genetic, immunological and biochemical tools to increase our understanding of how inflammation arises and how it might be controlled at mucosal surfaces. Here we provide a detailed description of how to systematically assess inflammatory disease in the lung and intestines of the laboratory mouse. We provide histopathology examples from SHIP mutant mice that are the only known genetic mutant to suffer from pulmonary consolidation, asthma, and Crohn's disease. The intent of this chapter is to facilitate increased surveillance of mucosal inflammation in studies where the laboratory mouse is utilized so that we can better understand the cell types, genes, and microorganisms that contribute to mucosal inflammatory disease and thereby develop more effective therapies and preventive strategies.
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In vivo animal models possess limitations: species-specific differences between animals and humans cause differences in drug efficacy and toxicity tests in physiology and cell biology.
“Species-specific differences between animals and humans cause differences in drug efficacy and toxicity tests in physiology and cell biology31–37.”
From Tumor-on-a-chip: from bioinspired design to biomedical application (2021) · cites this paper as [31]
Cites
Unravelling the pathogenesis of inflammatory bowel disease
Xavier, R. J., & Podolsky, D. K. (2007) · Nature · doi:10.1038/nature06005 · Cited by 4,364 · see citing works
A Genome-Wide Association Study Identifies <i>IL23R</i> as an Inflammatory Bowel Disease Gene
Duerr, R. H., Taylor, K. D., Brant, S. R., Rioux, J. D., Silverberg, M. S., Daly, M. J., Steinhart, A. H., Abraham, C., Regueiro, M., Griffiths, A., et al. (2006) · Science · doi:10.1126/science.1135245 · Cited by 3,039 · see citing works
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease
the NIDDK IBD Genetics Consortium, Barrett, J. C., the Belgian-French IBD Consortium, the Wellcome Trust Case Control Consortium, Hansoul, S., Nicolae, D. L., Cho, J. H., Duerr, R. H., Rioux, J. D., Brant, S. R., et al. (2008) · Nature Genetics · doi:10.1038/ng.175 · Cited by 2,593 · see citing works
The immunological and genetic basis of inflammatory bowel disease
Bouma, G., & Strober, W. (2003) · Nature reviews. Immunology · doi:10.1038/nri1132 · Cited by 1,882 · see citing works
Mechanisms of Disease: pathogenesis of Crohn's disease and ulcerative colitis
Sartor, R. B. (2006) · Nature Clinical Practice Gastroenterology & Hepatology · doi:10.1038/ncpgasthep0528 · Cited by 1,763 · see citing works
Van der Sluis, M., De Koning, B. A. E., De Bruijn, A. C. J. M., Velcich, A., Meijerink, J. P. P., Van Goudoever, J. B., Büller, H. A., Dekker, J., Van Seuningen, I., Renes, I. B., et al. (2006) · Gastroenterology · doi:10.1053/j.gastro.2006.04.020 · Cited by 1,684 · see citing works
A key role for autophagy and the autophagy gene Atg16l1 in mouse and human intestinal Paneth cells
Cadwell, K., Liu, J. Y., Brown, S. L., Miyoshi, H., Loh, J., Lennerz, J. K., Kishi, C., Kc, W., Carrero, J. A., Hunt, S., et al. (2008) · Nature · doi:10.1038/nature07416 · Cited by 1,542 · see citing works
IL-23 is essential for T cell–mediated colitis and promotes inflammation via IL-17 and IL-6
Yen, D., Cheung, J., Scheerens, H., Poulet, F. M., McClanahan, T. K., McKenzie, B. S., Kleinschek, M. A., Owyang, A. M., Mattson, J. D., Blumenschein, W. M., et al. (2006) · Journal of Clinical Investigation · doi:10.1172/jci21404 · Cited by 1,532 · see citing works
Impaired On/Off Regulation of TNF Biosynthesis in Mice Lacking TNF AU-Rich Elements
Kontoyiannis, D. L., Pasparakis, M., Pizarro, T. T., Cominelli, F., & Kollias, G. A. (1999) · Immunity · doi:10.1016/s1074-7613(00)80038-2 · Cited by 1,329 · see citing works
The Immunology of Mucosal Models of Inflammation
Strober, W., Fuss, I. J., & Blumberg, R. S. (2002) · Annual Review of Immunology · doi:10.1146/annurev.immunol.20.100301.064816 · Cited by 1,300 · see citing works
Cario, E., & Podolsky, D. K. (2000) · Infection and Immunity · doi:10.1128/iai.68.12.7010-7017.2000 · Cited by 1,245 · see citing works
Fuss, I. J., Neurath, M. F., Boirivant, M., Klein, J. S., de la Motte, C., Strong, S. A., Fiocchi, C., & Strober, W. (1996) · The Journal of Immunology · doi:10.4049/jimmunol.157.3.1261 · Cited by 1,227 · see citing works
The genetics and immunopathogenesis of inflammatory bowel disease
Cho, J. H. (2008) · Nature Reviews Immunology · doi:10.1038/nri2340 · Cited by 940 · see citing works
Heazlewood, C. K., Cook, M. C., Eri, R., Price, G. R., Tauro, S. B., Taupin, D., Thornton, D. J., Png, C. W., Crockford, T. L., Cornall, R. J., et al. (2008) · PLoS Medicine · doi:10.1371/journal.pmed.0050054 · Cited by 701 · see citing works
CARD15/NOD2 functions as an antibacterial factor in human intestinal epithelial cells
Hisamatsu, T., Suzuki, M., Reinecker, H., Nadeau, W. J., McCormick, B. A., & Podolsky, D. K. (2003) · Gastroenterology · doi:10.1053/gast.2003.50153 · Cited by 632 · see citing works
Pizarro, T. T., Michie, M. H., Bentz, M., Woraratanadharm, J., Smith, M. F., Foley, E. F., Moskaluk, C. A., Bickston, S. J., & Cominelli, F. (1999) · The Journal of Immunology · doi:10.4049/jimmunol.162.11.6829 · Cited by 573 · see citing works
Monteleone, G., Biancone, L., Marasco, R., Morrone, G., Marasco, O., Luzza, F., & Pallone, F. (1997) · Gastroenterology · doi:10.1016/s0016-5085(97)70128-8 · Cited by 571 · see citing works
Helgason, C. D., Damen, J. E., Rosten, P., Grewal, R., Sorensen, P., Chappel, S. M., Borowski, A., Jirik, F., Krystal, G., & Humphries, R. K. (1998) · Genes & Development · doi:10.1101/gad.12.11.1610 · Cited by 556 · see citing works
Mouse models of inflammatory bowel disease☆
Wirtz, S. J., & Neurath, M. F. (2007) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2007.07.003 · Cited by 508 · see citing works
Control of intestinal inflammation by regulatory T cells
Singh, B., Read, S., Asseman, C., Malmström, V., Mottet, C., Stephens, L. A., Štëpánková, R., Tlaskalová, H., & Powrie, F. M. (2001) · Immunological Reviews · doi:10.1034/j.1600-065x.2001.1820115.x · Cited by 500 · see citing works
Common variants at five new loci associated with early-onset inflammatory bowel disease
Imielinski, M. B., Baldassano, R. N., Griffiths, A. M., Russell, R. K., Annese, V., Dubinsky, M. C., Kugathasan, S., Bradfield, J. P., Walters, T. D., Abou‐Sleiman, P. M., et al. (2009) · Nature Genetics · doi:10.1038/ng.489 · Cited by 479 · see citing works
Shanahan, F. (2002) · The Lancet · doi:10.1016/s0140-6736(02)07284-7 · Cited by 478 · see citing works
SHIP Represses the Generation of Alternatively Activated Macrophages
Rauh, M. J., Ho, V. W., Pereira, C. C., Sham, A. P., Sly, L. M., Lam, V., Huxham, L. A., Minchinton, A. I., Mui, A., & Krystal, G. (2005) · Immunity · doi:10.1016/j.immuni.2005.09.003 · Cited by 298 · see citing works
Matsumoto, S., Okabe, Y., Setoyama, H., Takayama, K., Ohtsuka, J., Funahashi, H., Imaoka, A., Okada, Y., & Umesaki, Y. (1998) · Gut · doi:10.1136/gut.43.1.71 · Cited by 272 · see citing works
Th1-type responses mediate spontaneous ileitis in a novel murine model of Crohn’s disease
Kosiewicz, M. M., Nast, C. C., Krishnan, A., Rivera–Nieves, J., Moskaluk, C. A., Matsumoto, S., Kozaiwa, K., & Cominelli, F. (2001) · Journal of Clinical Investigation · doi:10.1172/jci10956 · Cited by 248 · see citing works
Course of Crohn's disease after allogeneic marrow transplantation
Lopez-Cubero, S. O., Sullivan, K. M., & McDonald, G. B. (1998) · Gastroenterology · doi:10.1016/s0016-5085(98)70525-6 · Cited by 218 · see citing works
Dieckgraefe, B. K., & Korzenik, J. R. (2002) · The Lancet · doi:10.1016/s0140-6736(02)11437-1 · Cited by 212 · see citing works
Marini, M., Bamias, G., Rivera–Nieves, J., Moskaluk, C. A., Hoang, S. B., Ross, W. G., Pizarro, T. T., & Cominelli, F. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1432897100 · Cited by 198 · see citing works
Influence of SHIP on the NK Repertoire and Allogeneic Bone Marrow Transplantation
Wang, J.-W., Howson, J. M., Ghansah, T., Desponts, C., Ninos, J. M., May, S. L., Nguyen, K. H. T., Toyama-Sorimachi, N., & Kerr, W. G. (2002) · Science · doi:10.1126/science.1068438 · Cited by 178 · see citing works
Self-citationThe primary defect in experimental ileitis originates from a nonhematopoietic source
Olson, T. S., Reuter, B. K., Scott, K. G. –., MORRIS, M. A., Wang, X.-M., Hancock, L. N., Burcin, T. L., Cohn, S. M., Ernst, P. B., Cominelli, F., et al. (2006) · The Journal of Experimental Medicine · doi:10.1084/jem.20050407 · Cited by 172 · see citing works
Packey, C. D., & Sartor, R. B. (2008) · Journal of Internal Medicine · doi:10.1111/j.1365-2796.2008.01962.x · Cited by 171 · see citing works
Biochemical Characterization of Endogenously Formed Eosinophilic Crystals in the Lungs of Mice*
Guo, L., Johnson, R. S., & Schuh, J. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.275.11.8032 · Cited by 149 · see citing works
Inhibitor and activator: dual functions for SHIP in immunity and cancer
Kerr, W. G. (2010) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.2010.05869.x · Cited by 111 · see citing works
Self-citationExpansion of Myeloid Suppressor Cells in SHIP-Deficient Mice Represses Allogeneic T Cell Responses
Ghansah, T., Paraiso, K. H. T., Highfill, S. L., Desponts, C., May, S. L., McIntosh, J. K., Wang, J.-W., Ninos, J. M., Brayer, J. B., Cheng, F., et al. (2004) · The Journal of Immunology · doi:10.4049/jimmunol.173.12.7324 · Cited by 104 · see citing works
Self-citationSHIP deficiency causes Crohn's disease-like ileitis
Kerr, W. G., Park, M.-Y., Maubert, M., & Engelman, R. W. (2010) · Gut · doi:10.1136/gut.2009.202283 · Cited by 74 · see citing works
Self-citationA CD8+/CD103high T Cell Subset Regulates TNF-Mediated Chronic Murine Ileitis
Ho, J., Kurtz, C. C., Naganuma, M., Ernst, P. B., Cominelli, F., & Rivera–Nieves, J. (2008) · The Journal of Immunology · doi:10.4049/jimmunol.180.4.2573 · Cited by 72 · see citing works
SHIP Regulates the Reciprocal Development of T Regulatory and Th17 Cells
Locke, N. R., Patterson, S. J., Hamilton, M. J., Sly, L. M., Krystal, G., & Levings, M. K. (2009) · The Journal of Immunology · doi:10.4049/jimmunol.0803749 · Cited by 71 · see citing works
Eosinophilic Crystalline Pneumonia as a Major Cause of Death in 129S4/SvJae Mice
Hoenerhoff, M. J., Starost, M. F., & Ward, J. M. (2006) · Veterinary Pathology · doi:10.1354/vp.43-5-682 · Cited by 71 · see citing works
Induced SHIP Deficiency Expands Myeloid Regulatory Cells and Abrogates Graft-versus-Host Disease
Paraiso, K. H. T., Ghansah, T., Costello, A., Engelman, R. W., & Kerr, W. G. (2007) · The Journal of Immunology · doi:10.4049/jimmunol.178.5.2893 · Cited by 68 · see citing works
Self-citationKashiwada, M., Cattoretti, G., McKeag, L., Rouse, T. M., Showalter, B. M., Al‐Alem, U., Niki, M., Pandolfi, P. P., Field, E. H., & Rothman, P. B. (2006) · The Journal of Immunology · doi:10.4049/jimmunol.176.7.3958 · Cited by 66 · see citing works
SHIP limits immunoregulatory capacity in the T-cell compartment
Collazo, M. M., Wood, D., Paraiso, K. H. T., Lund, E., Engelman, R. W., Le, C.-T., Stauch, D., Kotsch, K., & Kerr, W. G. (2009) · Blood · doi:10.1182/blood-2008-09-181164 · Cited by 61 · see citing works
Self-citationSHIP, a new player in cytokine-induced signalling
Liu, L., Damen, J. E., Ware, M. D., Hughes, M. R., & Krystal, G. (1997) · Leukemia · doi:10.1038/sj.leu.2400559 · Cited by 50 · see citing works
IgA autoreactivity: a feature common to inflammatory bowel and connective tissue diseases
Kazemi-Shirazi, L., Gasché, C., Natter, S., et al. (2002) · Clinical & Experimental Immunology · doi:10.1046/j.1365-2249.2002.01804.x · Cited by 29 · see citing works
Animal Models of Inflammatory Bowel Disease at the Dawn of the New Genetics Era
Sollid, L. M., & Johansen, F. (2008) · PLoS Medicine · doi:10.1371/journal.pmed.0050198 · Cited by 28 · see citing works
A Role for SHIP in Stem Cell Biology and Transplantation
Kerr, W. G. (2008) · Current Stem Cell Research & Therapy · doi:10.2174/157488808784223050 · Cited by 17 · see citing works
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Tumor-on-a-chip: from bioinspired design to biomedical application
Liu, X., Fang, J., Huang, S., Wu, X., Xie, X., Wang, J., Liu, F., Zhang, M., Peng, Z., & Hu, N. (2021) · Microsystems & Nanoengineering · doi:10.1038/s41378-021-00277-8 · Cited by 246 · see citing works
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Kang, T., & Kim, H. (2016) · Micromachines · doi:10.3390/mi7070107 · Cited by 40 · see citing works
- Authors
- Engelman, R. W., & Kerr, W. G.
- Affiliations
- University of South Florida (US)
- SUNY Upstate Medical University (US)
- Corresponding author
- Kerr, William G.
- ORCID
- Kerr, William G.
- Venue
- Methods in Molecular Biology
- Publisher
- Humana Press
- Published
- 2012
- Volume
- 900
- Pages
- 433-441
- ISSN
- 1064-3745 (ISSN-L)
- 1940-6029
- OpenAlex
- W2401869278
- Cited by
- 7
- References
- 45
- Citations by year
- 2024: 1 · 2021: 1 · 2019: 2 · 2016: 2 · 2015: 1
- FWCI
- 0.84
- Type
- book chapter
- Language
- en
- Open access
- closed
- Licence
- Locations
- Methods in molecular biology (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health (5r01hl107127-04)
- National Heart, Lung, and Blood Institute (R01-HL107127, R01 HL72523, R01HL085580, R01HL072523)
- Topics
- Health Sciences › Medicine › Physiology › Asthma and respiratory diseases
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Inflammatory Bowel Disease
- Life Sciences › Immunology and Microbiology › Immunology › T-cell and B-cell Immunology
- Keywords
- mucosal inflammation, asthma, inflammatory bowel disease, Crohn's disease, lung consolidation, lung histopathology, intestinal histopathology, genetic disease models
- MeSH terms
- Inositol Polyphosphate 5-Phosphatases, Animals, Eosinophils, Intestinal Mucosa, Mice, Transgenic, Models, Genetic, Molecular Biology, Phosphoric Monoester Hydrolases, Inflammatory Bowel Diseases, Mice
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