Quantitative Trait Loci Mapping in Plants: Concepts and Approaches

Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing

Benjamini, Y., & Hochberg, Y. (1995) · Journal of the Royal Statistical Society Series B: Statistical Methodology · doi:10.1111/j.2517-6161.1995.tb02031.x · Cited by 109,482 · see citing works

Inference of Population Structure Using Multilocus Genotype Data

Pritchard, J. K., Stephens, M., & Donnelly, P. (2000) · Genetics · doi:10.1093/genetics/155.2.945 · Cited by 33,871 · see citing works

Principal components analysis corrects for stratification in genome-wide association studies

Price, A. L., Patterson, N. J., Plenge, R. M., Weinblatt, M. E., Shadick, N. A., & Reich, D. (2006) · Nature Genetics · doi:10.1038/ng1847 · Cited by 10,248 · see citing works

Finding the missing heritability of complex diseases

Manolio, T. A., Collins, F. S., Cox, N. J., Goldstein, D. B., Hindorff, L. A., Hunter, D. J., McCarthy, M. I., Ramos, E. M., Cardon, L. R., Chakravarti, A., et al. (2009) · Nature · doi:10.1038/nature08494 · Cited by 8,336 · see citing works

MAPMAKER: An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations

Lander, E. S., Green, P., Abrahamson, J., Barlow, A., Daly, M. J., Lincoln, S. E., & Newberg, L. A. (1987) · Genomics · doi:10.1016/0888-7543(87)90010-3 · Cited by 6,657 · see citing works

The Future of Genetic Studies of Complex Human Diseases

Risch, N., & Merikangas, K. (1996) · Science · doi:10.1126/science.273.5281.1516 · Cited by 5,355 · see citing works

PowerMarker: an integrated analysis environment for genetic marker analysis

Liu, K., & Muse, S. V. (2005) · Computer applications in the biosciences · doi:10.1093/bioinformatics/bti282 · Cited by 4,477 · see citing works

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

Yu, J., Pressoir, G., Briggs, W. H., Bi, I. V., Yamasaki, M., Doebley, J., McMullen, M. D., Gaut, B. S., Nielsen, D. M., Holland, J. B., et al. (2005) · Nature Genetics · doi:10.1038/ng1702 · Cited by 4,155 · see citing works

Precision mapping of quantitative trait loci.

Zeng, Z. B. (1994) · Genetics · doi:10.1093/genetics/136.4.1457 · Cited by 3,182 · see citing works

Genomic Control for Association Studies

Devlin, B., & Roeder, K. (1999) · Biometrics · doi:10.1111/j.0006-341x.1999.00997.x · Cited by 3,162 · see citing works

A simple regression method for mapping quantitative trait loci in line crosses using flanking markers

Haley, C. S., & Knott, S. A. (1992) · Heredity · doi:10.1038/hdy.1992.131 · Cited by 1,991 · see citing works

An introduction to markers, quantitative trait loci (QTL) mapping and marker-assisted selection for crop improvement: The basic concepts

Collard, B. C. Y., Jahufer, M. Z. Z., Brouwer, J. B., & Pang, E. C. K. (2005) · Euphytica · doi:10.1007/s10681-005-1681-5 · Cited by 1,757 · see citing works

Structure of Linkage Disequilibrium in Plants

Flint-Garcia, S. A., Thornsberry, J. M., & Buckler, E. S. (2003) · Annual Review of Plant Biology · doi:10.1146/annurev.arplant.54.031902.134907 · Cited by 1,700 · see citing works

High density molecular linkage maps of the tomato and potato genomes.

Tanksley, S. D., Ganal, M. W., Prince, J. P., et al. (1992) · Genetics · doi:10.1093/genetics/132.4.1141 · Cited by 1,595 · see citing works

The Genetic Architecture of Maize Flowering Time

Buckler, E. S., Holland, J. B., Bradbury, P. J., Acharya, C. B., Brown, P. J., Browne, C., Ersoz, E. S., Flint-Garcia, S. A., Garcia, A. R., Glaubitz, J. C., et al. (2009) · Science · doi:10.1126/science.1174276 · Cited by 1,462 · see citing works

Drought tolerance improvement in crop plants: An integrated view from breeding to genomics

Cattivelli, L., Rizza, F., Badeck, F., Mazzucotelli, E., Mastrangelo, A. M., Francia, E., Marè, C., Tondelli, A., & Stanca, A. M. (2007) · Field Crops Research · doi:10.1016/j.fcr.2007.07.004 · Cited by 1,446 · see citing works

Construction of integrated genetic linkage maps by means of a new computer package: Join Map

Stam, P. (1993) · The Plant Journal · doi:10.1111/j.1365-313x.1993.00739.x · Cited by 1,394 · see citing works

Status and Prospects of Association Mapping in Plants

Zhu, C., Gore, M. A., Buckler, E. S., & Yu, J. (2008) · The Plant Genome · doi:10.3835/plantgenome2008.02.0089 · Cited by 1,344 · see citing works

Structure of linkage disequilibrium and phenotypic associations in the maize genome

Remington, D. L., Thornsberry, J. M., Matsuoka, Y., Wilson, L. M., Whitt, S. R., Doebley, J., Kresovich, S., Goodman, M. M., & Buckler, E. S. (2001) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.201394398 · Cited by 1,258 · see citing works

Map Manager QTX, cross-platform software for genetic mapping

Manly, K. F., Cudmore, R. H., & Meer, J. M. (2001) · Mammalian Genome · doi:10.1007/s00335-001-1016-3 · Cited by 1,226 · see citing works

Genetic Properties of the Maize Nested Association Mapping Population

McMullen, M. D., Kresovich, S., Sánchez‐Villeda, H., Bradbury, P. J., Li, H., Sun, Q., Flint-Garcia, S. A., Thornsberry, J. M., Acharya, C. B., Bottoms, C. A., et al. (2009) · Science · doi:10.1126/science.1174320 · Cited by 1,062 · see citing works

High resolution of quantitative traits into multiple loci via interval mapping.

Jansen, R. C., & Stam, P. (1994) · Genetics · doi:10.1093/genetics/136.4.1447 · Cited by 1,046 · see citing works

Association Mapping of Kernel Size and Milling Quality in Wheat (Triticum aestivum L.) Cultivars

Breseghello, F., & Sorrells, M. E. (2005) · Genetics · doi:10.1534/genetics.105.044586 · Cited by 1,026 · see citing works

MAPPING POLYGENES

Tanksley, S. D. (1993) · Annual Review of Genetics · doi:10.1146/annurev.ge.27.120193.001225 · Cited by 1,017 · see citing works

Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels

Li, H., Peng, Z., Yang, X., Wang, W., Fu, J., Wang, J., Han, Y., Chai, Y., Guo, T., Yang, N., et al. (2012) · Nature Genetics · doi:10.1038/ng.2484 · Cited by 841 · see citing works

Natural Genetic Variation in Lycopene Epsilon Cyclase Tapped for Maize Biofortification

Harjes, C., Rocheford, T., Bai, L., Brutnell, T. P., Kandianis, C. B., Sowinski, S. G., Stapleton, A. E., Vallabhaneni, R., Williams, M., Wurtzel, E. T., et al. (2008) · Science · doi:10.1126/science.1150255 · Cited by 787 · see citing works

GOLD—Graphical Overview of Linkage Disequilibrium

Abecasis, G. R., & Cookson, W. (2000) · Bioinformatics · doi:10.1093/bioinformatics/16.2.182 · Cited by 776 · see citing works

Linkage disequilibrium and association studies in higher plants: Present status and future prospects

Gupta, P. K., Rustgi, S., & Kulwal, P. L. (2005) · Plant Molecular Biology · doi:10.1007/s11103-005-0257-z · Cited by 670 · see citing works

A Multiparent Advanced Generation Inter-Cross to Fine-Map Quantitative Traits in Arabidopsis thaliana

Kover, P. X., Valdar, W. S. J., Trakalo, J., Scarcelli, N., Ehrenreich, I. M., Purugganan, M. D., Durrant, C., & Mott, R. (2009) · PLoS Genetics · doi:10.1371/journal.pgen.1000551 · Cited by 626 · see citing works

Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maize

Salvi, S., Sponza, G., Morgante, M., Tomes, D. T., Niu, X., Fengler, K. A., Meeley, R. B., Ananiev, E. V., Svitashev, S. K., Bruggemann, E. P., et al. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0704145104 · Cited by 616 · see citing works

QTL MAPPING AND QUANTITATIVE DISEASE RESISTANCE IN PLANTS

Young, N. D. (1996) · Annual Review of Phytopathology · doi:10.1146/annurev.phyto.34.1.479 · Cited by 547 · see citing works

Association genetics of complex traits in conifers

Neale, D. B., & Savolainen, O. (2004) · Trends in Plant Science · doi:10.1016/j.tplants.2004.05.006 · Cited by 500 · see citing works

Rare genetic variation at Zea mays crtRB1 increases β-carotene in maize grain

Yan, J., Kandianis, C. B., Harjes, C., Bai, L., Kim, E.-H., Yang, X., Skinner, D. J., Fu, Z., Mitchell, S., Li, Q., et al. (2010) · Nature Genetics · doi:10.1038/ng.551 · Cited by 482 · see citing works

Plant genetic resources: What can they contribute toward increased crop productivity?

Hoisington, D. A., Khairallah, M., Reeves, T. G., Ribaut, J., Skovmand, B., Taba, S., & Warburton, M. L. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.11.5937 · Cited by 473 · see citing works

Genomewide Rapid Association Using Mixed Model and Regression: A Fast and Simple Method For Genomewide Pedigree-Based Quantitative Trait Loci Association Analysis

Aulchenko, Y., de Koning, D., & Haley, C. (2007) · Genetics · doi:10.1534/genetics.107.075614 · Cited by 460 · see citing works

Association Analysis of Historical Bread Wheat Germplasm Using Additive Genetic Covariance of Relatives and Population Structure

Crossa, J. L., Burgueño, J. A., Dreisigacker, S., Vargas, M., Herrera-Foessel, S. A., Lillemo, M., Singh, R. P., Trethowan, R. M., Warburton, M. L., Franco, J., et al. (2007) · Genetics · doi:10.1534/genetics.107.078659 · Cited by 451 · see citing works

A phenylalanine in DGAT is a key determinant of oil content and composition in maize

Zheng, P., Allen, W. B., Roesler, K. R., Williams, M. E., Zhang, S., Li, J., Glassman, K., Ranch, J., Nubel, D., Solawetz, W., et al. (2008) · Nature Genetics · doi:10.1038/ng.85 · Cited by 449 · see citing works

Genome-Wide Association Mapping in Arabidopsis Identifies Previously Known Flowering Time and Pathogen Resistance Genes

Aranzana, M. J., Kim, S., Zhao, K., Bakker, E. G., Horton, M., Jakob, K., Lister, C., Molitor, J., Shindo, C., Tang, C., et al. (2005) · PLoS Genetics · doi:10.1371/journal.pgen.0010060 · Cited by 448 · see citing works

Identification and development of a functional marker of TaGW2 associated with grain weight in bread wheat (Triticum aestivum L.)

Su, Z., Hao, C., Wang, L., Dong, Y., & Zhang, X. (2010) · Theoretical and Applied Genetics · doi:10.1007/s00122-010-1437-z · Cited by 437 · see citing works

Cytologically Integrated Physical Restriction Fragment Length Polymorphism Maps for the Barley Genome Based on Translocation Breakpoints

Künzel, G., Korzun, L., & Meister, A. (2000) · Genetics · doi:10.1093/genetics/154.1.397 · Cited by 437 · see citing works

Quantitative Trait Loci Associated with Drought Tolerance at Reproductive Stage in Rice

Lanceras, J. C., Pantuwan, G., Jongdee, B., & Toojinda, T. (2004) · PLANT PHYSIOLOGY · doi:10.1104/pp.103.035527 · Cited by 370 · see citing works

Genome Wide Association Studies Using a New Nonparametric Model Reveal the Genetic Architecture of 17 Agronomic Traits in an Enlarged Maize Association Panel

Yang, N., Lu, Y., Yang, X., Huang, J., Zhou, Y., Ali, F., Wen, W., Liu, J., Li, J., & Yan, J. (2014) · PLoS Genetics · doi:10.1371/journal.pgen.1004573 · Cited by 366 · see citing works

Dissection of Maize Kernel Composition and Starch Production by Candidate Gene Association

Wilson, L. M., Whitt, S. R., Ibáñez, A., et al. (2004) · The Plant Cell · doi:10.1105/tpc.104.025700 · Cited by 345 · see citing works

PLABQTL: a program for composite interval mapping of QTL.

Utz, H. F., & Melchinger, A. E. (1996) · Cited by 338 · see citing works

Association genetics of complex traits in plants

Ingvarsson, P. K., & Street, N. R. (2010) · New Phytologist · doi:10.1111/j.1469-8137.2010.03593.x · Cited by 334 · see citing works

Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties

Rostoks, N., Ramsay, L., MacKenzie, K., et al. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0606133103 · Cited by 323 · see citing works

Association mapping of yield and its components in rice cultivars

Agrama, H. A., Eizenga, G. C., & Yan, W. (2007) · Molecular Breeding · doi:10.1007/s11032-006-9066-6 · Cited by 315 · see citing works

A multiparent advanced generation inter‐cross population for genetic analysis in wheat

Huang, B. E., George, A. W., Forrest, K., Kilian, A., Hayden, M., Morell, M. K., & Cavanagh, C. R. (2012) · Plant Biotechnology Journal · doi:10.1111/j.1467-7652.2012.00702.x · Cited by 307 · see citing works

Present and future of quantitative trait locus analysis in plant breeding

Asíns, M. J. (2002) · Plant Breeding · doi:10.1046/j.1439-0523.2002.730285.x · Cited by 297 · see citing works

Believe it or not, QTLs are accurate!

Price, A. H. (2006) · Trends in Plant Science · doi:10.1016/j.tplants.2006.03.006 · Cited by 285 · see citing works

DNA Sequence Variation and Selection of Tag Single-Nucleotide Polymorphisms at Candidate Genes for Drought-Stress Response in Pinus taeda L.

González‐Martínez, S. C., Ersoz, E. S., Brown, G., Wheeler, N. C., & Neale, D. B. (2005) · Genetics · doi:10.1534/genetics.105.047126 · Cited by 281 · see citing works

Saturation Mapping of a Gene-Rich Recombination Hot Spot Region in Wheat

Faris, J. D., Haen, K. M., & Gill, B. S. (2000) · Genetics · doi:10.1093/genetics/154.2.823 · Cited by 236 · see citing works

Modeling and mapping QTL for senescence-related traits in winter wheat under high temperature

Vijayalakshmi, K., Fritz, A. K., Paulsen, G. M., Bai, G., Pandravada, S., & Gill, B. S. (2010) · Molecular Breeding · doi:10.1007/s11032-009-9366-8 · Cited by 233 · see citing works

Reverse engineering the genotype–phenotype map with natural genetic variation

Rockman, M. V. (2008) · Nature · doi:10.1038/nature07633 · Cited by 231 · see citing works

Association mapping in durum wheat grown across a broad range of water regimes

Maccaferri, M., Sanguineti, M. C., Demontis, A., El-Ahmed, A., del Moral, L. F. G., Maalouf, F., Nachit, M. M., Nserallah, N., Ouabbou, H., Sayar, R., et al. (2010) · Journal of Experimental Botany · doi:10.1093/jxb/erq287 · Cited by 228 · see citing works

QTL mapping of terminal heat tolerance in hexaploid wheat (T. aestivum L.)

Paliwal, R., Röder, M. S., Kumar, U., Srivastava, J. P., & Joshi, A. K. (2012) · Theoretical and Applied Genetics · doi:10.1007/s00122-012-1853-3 · Cited by 216 · see citing works

Molecular Techniques in Crop Improvement

Jain, S. M., & Brar, D. S. (2009) · Springer eBooks · doi:10.1007/978-90-481-2967-6 · Cited by 211 · see citing works

Genome-Wide Association Mapping for Seedling and Adult Plant Resistance to Stripe Rust in Synthetic Hexaploid Wheat

Zegeye, H., Rasheed, A., Makdis, F., et al. (2014) · PLoS ONE · doi:10.1371/journal.pone.0105593 · Cited by 203 · see citing works

Relationship, evolutionary fate and function of two maize co-orthologs of rice GW2 associated with kernel size and weight

Li, Q., Li, L., Yang, X., et al. (2010) · BMC Plant Biology · doi:10.1186/1471-2229-10-143 · Cited by 196 · see citing works

Mapping quantitative trait loci for milling quality, protein content and color characteristics of rice using a recombinant inbred line population derived from an elite rice hybrid

Tan, Y. F., Sun, M., Xing, Y., et al. (2001) · Theoretical and Applied Genetics · doi:10.1007/s001220100665 · Cited by 185 · see citing works

Using association mapping to dissect the genetic basis of complex traits in plants

Hall, D., Tegström, C., & Ingvarsson, P. K. (2010) · Briefings in Functional Genomics · doi:10.1093/bfgp/elp048 · Cited by 184 · see citing works

Mapping quantitative trait loci associated with root penetration ability in rice (Oryza sativa L.)

Ray, J. D., Yu, L., McCouch, S. R., et al. (1996) · Theoretical and Applied Genetics · doi:10.1007/bf00226082 · Cited by 183 · see citing works

Mapping QTLs for submergence tolerance in rice by AFLP analysis and selective genotyping

Nandi, S., Subudhi, P. K., Senadhira, D., et al. (1997) · Molecular and General Genetics MGG · doi:10.1007/s004380050468 · Cited by 180 · see citing works

QTL analysis and mapping of pi21, a recessive gene for field resistance to rice blast in Japanese upland rice

Fukuoka, S., & Okuno, K. (2001) · Theoretical and Applied Genetics · doi:10.1007/s001220100611 · Cited by 179 · see citing works

Genome-wide association study (GWAS) of resistance to head smut in maize

Wang, M., Yan, J., Zhao, J., Song, W., Zhang, X., Xiao, Y., & Zheng, Y. (2012) · Plant Science · doi:10.1016/j.plantsci.2012.08.004 · Cited by 173 · see citing works

Nucleotide Polymorphism and Phenotypic Associations Within and Around the phytochrome B2 Locus in European Aspen (Populus tremula, Salicaceae)

Ingvarsson, P. K., Garcia, M. V., Luquez, V., Hall, D., & Jansson, S. (2008) · Genetics · doi:10.1534/genetics.107.082354 · Cited by 170 · see citing works

Key Impact of Vgt1 on Flowering Time Adaptation in Maize: Evidence From Association Mapping and Ecogeographical Information

Ducrocq, S., Madur, D., Veyrieras, J., Camus‐Kulandaivelu, L., Kloiber-Maitz, M., Presterl, T., Ouzunova, M., Manicacci, D., & Charcosset, A. (2008) · Genetics · doi:10.1534/genetics.107.084830 · Cited by 152 · see citing works

Mapping QTLs in breeding for drought tolerance in maize (Zea mays L.)

Agrama, H. A., & Moussa, M. (1996) · Euphytica · doi:10.1007/bf00035278 · Cited by 151 · see citing works

Population, quantitative and comparative genomics of adaptation in forest trees

Neale, D. B., & Ingvarsson, P. K. (2008) · Current Opinion in Plant Biology · doi:10.1016/j.pbi.2007.12.004 · Cited by 151 · see citing works

Location of a gene regulating drought-induced abscisic acid production on the long arm of chromosome 5A of wheat

Quarrie, S. A., Gullì, M., Calestani, C., et al. (1994) · Theoretical and Applied Genetics · doi:10.1007/bf00223721 · Cited by 147 · see citing works

Cloning and characterization of a putative GS3 ortholog involved in maize kernel development

Li, Q., Yang, X., Bai, G., et al. (2009) · Theoretical and Applied Genetics · doi:10.1007/s00122-009-1196-x · Cited by 136 · see citing works

Nonmetric Multidimensional Scaling Corrects for Population Structure in Association Mapping With Different Sample Types

Zhu, C., & Yu, J. (2009) · Genetics · doi:10.1534/genetics.108.098863 · Cited by 134 · see citing works

Genetic association mapping identifies single nucleotide polymorphisms in genes that affect abscisic acid levels in maize floral tissues during drought

Setter, T. L., Yan, J., Warburton, M. L., Ribaut, J., Xu, Y., Sawkins, M. C., Buckler, E. S., Zhang, Z., & Gore, M. A. (2010) · Journal of Experimental Botany · doi:10.1093/jxb/erq308 · Cited by 131 · see citing works

Maize leaf temperature responses to drought: Thermal imaging and quantitative trait loci (QTL) mapping

Liu, Y., Chander, S., Yan, J., Song, C., Zhao, J., & Li, J. (2010) · Environmental and Experimental Botany · doi:10.1016/j.envexpbot.2010.11.010 · Cited by 130 · see citing works

Association mapping of stigma and spikelet characteristics in rice (Oryza sativa L.)

Yan, W. G., Li, Y., Agrama, H. A., et al. (2009) · Molecular Breeding · doi:10.1007/s11032-009-9290-y · Cited by 129 · see citing works

Genome-wide association analysis for nine agronomic traits in maize under well-watered and water-stressed conditions

Xue, Y., Warburton, M. L., Sawkins, M. C., Zhang, X., Setter, T. L., Xu, Y., Grudloyma, P., Gethi, J., Ribaut, J., Li, W., et al. (2013) · Theoretical and Applied Genetics · doi:10.1007/s00122-013-2158-x · Cited by 129 · see citing works

Molecular characterization of meiotic recombination across the 140-kb multigenic a1 - sh2 interval of maize

Yao, H., Zhou, Q., Li, J., et al. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.082562199 · Cited by 122 · see citing works

Allelic Analysis of Sheath Blight Resistance with Association Mapping in Rice

Jia, L., Yan, W., Zhu, C., Agrama, H. A., Jackson, A. K., Yeater, K. M., Li, X., Huang, B., Hu, B., McClung, A. M., et al. (2012) · PLoS ONE · doi:10.1371/journal.pone.0032703 · Cited by 117 · see citing works

Mapping QTLs for phosphorus deficiency tolerance in rice (Oryza sativa L.)

Ni, J. J., Wu, P., Senadhira, D., et al. (1998) · Theoretical and Applied Genetics · doi:10.1007/s001220051030 · Cited by 117 · see citing works

Vrn-D4 is a vernalization gene located on the centromeric region of chromosome 5D in hexaploid wheat

Yoshida, T., Nishida, H., Zhu, J., Nitcher, R., Distelfeld, A., Akashi, Y., Kato, K., & Dubcovsky, J. (2009) · Theoretical and Applied Genetics · doi:10.1007/s00122-009-1174-3 · Cited by 114 · see citing works

Genome-Wide Association Study Identifies Candidate Genes That Affect Plant Height in Chinese Elite Maize (Zea mays L.) Inbred Lines

Weng, J., Xie, C., Hao, Z., et al. (2011) · PLoS ONE · doi:10.1371/journal.pone.0029229 · Cited by 109 · see citing works

Mapping of a major QTL for pre-harvest sprouting tolerance on chromosome 3A in bread wheat

Kulwal, P. L., Kumar, N., Gaur, A., et al. (2005) · Theoretical and Applied Genetics · doi:10.1007/s00122-005-0021-4 · Cited by 109 · see citing works

Microsatellites, single nucleotide polymorphisms and a sequence tagged site in starch-synthesizing genes in relation to starch physicochemical properties in nonwaxy rice (Oryza sativa L.)

Bao, J., Corke, H., & Sun, M. (2006) · Theoretical and Applied Genetics · doi:10.1007/s00122-006-0394-z · Cited by 108 · see citing works

Genetic Linkage: Interpreting Lod Scores

RISCH, N. J. (1992) · Science · doi:10.1126/science.1536004 · Cited by 104 · see citing works

Association and Linkage Analysis of Aluminum Tolerance Genes in Maize

Krill, A. M., Kirst, M., Kochian, L. V., Buckler, E. S., & Hoekenga, O. A. (2010) · PLoS ONE · doi:10.1371/journal.pone.0009958 · Cited by 103 · see citing works

Genetic diversity and association mapping of seed vigor in rice (Oryza sativa L.)

Dang, X., Thi, T. G. T., Dong, G., Wang, H., Edzesi, W. M., & Hong, D. (2014) · Planta · doi:10.1007/s00425-014-2060-z · Cited by 100 · see citing works

QTL mapping and phenotypic variation for root architectural traits in maize (Zea mays L.)

Burton, A. L., Johnson, J. M., Foerster, J. M., Hirsch, C. N., Buell, C. R., Hanlon, M. T., Kaeppler, S. M., Brown, K. M., & Lynch, J. P. (2014) · Theoretical and Applied Genetics · doi:10.1007/s00122-014-2353-4 · Cited by 100 · see citing works

QTL mapping of grain quality traits in rice

Jue, L., Chen, L., Yue, G., et al. (2009) · Journal of Cereal Science · doi:10.1016/j.jcs.2009.04.005 · Cited by 99 · see citing works

Unraveling the Complex Trait of Harvest Index with Association Mapping in Rice (Oryza sativa L.)

Li, X., Yan, W., Agrama, H. A., Jia, L., Jackson, A. K., Moldenhauer, K. A. K., Yeater, K. M., McClung, A. M., & Wu, D. (2012) · PLoS ONE · doi:10.1371/journal.pone.0029350 · Cited by 97 · see citing works

Genome-wide association mapping of flowering time and northern corn leaf blight (Setosphaeria turcica) resistance in a vast commercial maize germplasm set

Inghelandt, D. V., Melchinger, A. E., Martinant, J., & Stich, B. (2012) · BMC Plant Biology · doi:10.1186/1471-2229-12-56 · Cited by 93 · see citing works

Identification of Ug99 stem rust resistance loci in winter wheat germplasm using genome-wide association analysis

Yu, L., Morgounov, A. I., Wanyera, R., et al. (2012) · Theoretical and Applied Genetics · doi:10.1007/s00122-012-1867-x · Cited by 90 · see citing works

Multi-environment analysis and improved mapping of a yield-related QTL on chromosome 3B of wheat

Bonneau, J. P., Taylor, J., Parent, B., Bennett, D., Reynolds, M. P., Feuillet, C., Langridge, P., & Mather, D. E. (2012) · Theoretical and Applied Genetics · doi:10.1007/s00122-012-2015-3 · Cited by 88 · see citing works

Using Natural Allelic Diversity to Evaluate Gene Function

Whitt, S. R., & Buckler, E. S. (2003) · Humana Press eBooks · doi:10.1385/1-59259-413-1:123 · Cited by 83 · see citing works

Quantitative trait loci for early plant vigour of maize grown in chilly environments

Presterl, T., Ouzunova, M., Schmidt, W., Möller, E. M., Röber, F. K., Knaak, C., Ernst, K., Westhoff, P., & Geiger, H. H. (2007) · Theoretical and Applied Genetics · doi:10.1007/s00122-006-0499-4 · Cited by 81 · see citing works

Genome-wide association mapping for five major pest resistances in wheat

Joukhadar, R., El‐Bouhssini, M., Jighly, A., et al. (2013) · Molecular Breeding · doi:10.1007/s11032-013-9924-y · Cited by 81 · see citing works

Identification and mapping QTL for high-temperature adult-plant resistance to stripe rust in winter wheat (Triticum aestivum L.) cultivar ‘Stephens’

Santra, D. K., Chen, X., Santra, M., et al. (2008) · Theoretical and Applied Genetics · doi:10.1007/s00122-008-0820-5 · Cited by 79 · see citing works

Association mapping for yield and grain quality traits in rice (Oryza sativa L.)

Borba, T. C. D. O., Vianello, R. P., Breseghello, F., et al. (2010) · Genetics and Molecular Biology · doi:10.1590/s1415-47572010005000065 · Cited by 77 · see citing works

Association mapping for pre-harvest sprouting tolerance in common wheat (Triticum aestivum L.)

Jaiswal, V., Mir, R. R., Mohan, A., et al. (2012) · Euphytica · doi:10.1007/s10681-012-0713-1 · Cited by 71 · see citing works

Microsatellite-based molecular diversity of bread wheat germplasm and association mapping of wheat resistance to the Russian wheat aphid

Peng, J. H., Bai, Y., Haley, S. D., & Lapitan, N. L. V. (2008) · Genetica · doi:10.1007/s10709-008-9262-x · Cited by 71 · see citing works

G enome‐ w ide Association Analysis of Ten Chilling Tolerance Indices at the Germination and Seedling Stages in Maize

Huang, J., Zhang, J., Li, W., et al. (2013) · Journal of Integrative Plant Biology · doi:10.1111/jipb.12051 · Cited by 66 · see citing works

Deciphering the genetics of flowering time by an association study on candidate genes in bread wheat (Triticum aestivum L.)

Rousset, M., Bonnin, I., Remoué, C., et al. (2011) · Theoretical and Applied Genetics · doi:10.1007/s00122-011-1636-2 · Cited by 65 · see citing works

Molecular evaluation of genetic diversity and association studies in rice (Oryza sativa L.)

Vanniarajan, C., Vinod, K. K., & Pereira, A. (2012) · Journal of Genetics · doi:10.1007/s12041-012-0146-6 · Cited by 65 · see citing works

Molecular mapping and location of QTLs for drought-resistance traits in indica rice (Oryza sativa L.) lines adapted to target environments

Gomez, S. M., Boopathi, N. M., Kumar, S., et al. (2009) · Acta Physiologiae Plantarum · doi:10.1007/s11738-009-0413-1 · Cited by 65 · see citing works

Population structure and association mapping on chromosome 7 using a diverse panel of Chinese germplasm of rice (Oryza sativa L.)

Wen, W., Mei, H., Feng, F., et al. (2009) · Theoretical and Applied Genetics · doi:10.1007/s00122-009-1052-z · Cited by 62 · see citing works

QTL mapping of resistance to gray leaf spot in maize

Zhang, Y., Xu, L., Fan, X., et al. (2012) · Theoretical and Applied Genetics · doi:10.1007/s00122-012-1954-z · Cited by 61 · see citing works

Molecular Techniques in Crop Improvement

(2002) · Springer eBooks · doi:10.1007/978-94-017-2356-5 · Cited by 59 · see citing works

Identification of Major QTL for Waterlogging Tolerance Using Genome-Wide Association and Linkage Mapping of Maize Seedlings

Zhang, X., Tang, B., Yu, F., et al. (2012) · Plant Molecular Biology Reporter · doi:10.1007/s11105-012-0526-3 · Cited by 55 · see citing works

Molecular mapping of quantitative trait loci (QTLs) controlling aluminium tolerance in bread wheat

Navakode, S., Weidner, A., Lohwasser, U., et al. (2008) · Euphytica · doi:10.1007/s10681-008-9845-8 · Cited by 54 · see citing works

Association mapping of dynamic developmental plant height in common wheat

Zhang, J., Hao, C., Ren, Q., et al. (2011) · Planta · doi:10.1007/s00425-011-1434-8 · Cited by 53 · see citing works

QTL mapping for stay-green in maize (Zea mays)

Wang, A., Li, Y., & Zhang, C. (2012) · Canadian Journal of Plant Science · doi:10.4141/cjps2011-108 · Cited by 46 · see citing works

Genetic characterization and linkage disequilibrium mapping of resistance to gray leaf spot in maize (Zea mays L.)

Shi, L., Lv, X., Weng, J., Zhu, H., Liu, C., Hao, Z., Zhou, Y. G., Zhang, D., Li, M., Ci, X., et al. (2014) · The Crop Journal · doi:10.1016/j.cj.2014.02.001 · Cited by 46 · see citing works

DNA polymorphisms and haplotype patterns of transcription factors involved in barley endosperm development are associated with key agronomic traits

Haseneyer, G., Stracke, S., Piepho, H., Sauer, S., Geiger, H. H., & Graner, A. (2010) · BMC Plant Biology · doi:10.1186/1471-2229-10-5 · Cited by 45 · see citing works

Mapping of QTL for downy mildew resistance in maize

Agrama, H. A., Moussa, M., Naser, M. E., et al. (1999) · Theoretical and Applied Genetics · doi:10.1007/s001220051265 · Cited by 44 · see citing works

Variability of grain quality in sorghum: association with polymorphism in Sh2, Bt2, SssI, Ae1, Wx and O2

Figueiredo, L. F. D. A., Sine, B., Chantereau, J., et al. (2010) · Theoretical and Applied Genetics · doi:10.1007/s00122-010-1380-z · Cited by 44 · see citing works

Genome-wide association analysis identified SNPs closely linked to a gene resistant to Soil-borne wheat mosaic virus

Liu, S., Yang, X., Zhang, D., et al. (2014) · Theoretical and Applied Genetics · doi:10.1007/s00122-014-2277-z · Cited by 41 · see citing works

Genetic mapping of a QTL controlling leaf width and grain number in rice

Tian, Y., HongYu, Z., Xu, P., et al. (2014) · Euphytica · doi:10.1007/s10681-014-1263-5 · Cited by 41 · see citing works

QTL mapping for stay-green in maize (Zea mays)

Wang, A., Li, Y., & Zhang, C. (2012) · BioOne Complete (BioOne) · doi:10.1139/cjps2011-108 · Cited by 41 · see citing works

Genetic structure and association mapping of cold tolerance in improved japonica rice germplasm at the booting stage

Cui, D., Xu, C.-Y., Tang, C., Chun-gang, Y., Yu, T., Xinxiang, A., Cao, G., Xu, F.-R., Zhang, J.-G., & Han, L. (2013) · Euphytica · doi:10.1007/s10681-013-0935-x · Cited by 38 · see citing works

Genotype × Environment Interactions for Agronomic Traits of Rice Revealed by Association Mapping

Xu, F., Tang, F., Shao, Y., et al. (2014) · Rice Science · doi:10.1016/s1672-6308(13)60179-1 · Cited by 38 · see citing works

Analysis of QTL for resistance to head smut (Sporisorium reiliana) in maize

Xue-Yong, L. I., Wang, Z., Gao, S., et al. (2008) · Field Crops Research · doi:10.1016/j.fcr.2007.11.008 · Cited by 34 · see citing works

QTL mapping for reaction to Phaeosphaeria leaf spot in a tropical maize population

Moreira, J. U. V., Bento, D. A. V., de Souza, A. P., et al. (2009) · Theoretical and Applied Genetics · doi:10.1007/s00122-009-1140-0 · Cited by 31 · see citing works

Physical mapping of restriction fragment length polymorphism (RFLP) markers in homoeologous groups 1 and 3 chromosomes of wheat by in situ hybridization

Ma, X., Ross, K., & Gustafson, J. P. (2001) · Genome · doi:10.1139/g01-001 · Cited by 27 · see citing works

Identification of QTL for adult-plant resistance to powdery mildew in Chinese wheat landrace Pingyuan 50

Asad, M. A., Bai, B., Lan, C., et al. (2014) · The Crop Journal · doi:10.1016/j.cj.2014.04.009 · Cited by 23 · see citing works

Mapping quantitative trait loci associated with root penetration ability of wheat in contrasting environments

Acuña, T., Rebetzke, G. J., He, X., et al. (2014) · Molecular Breeding · doi:10.1007/s11032-014-0063-x · Cited by 23 · see citing works

Localization of QTL for basal root thickness in japonica rice and effect of marker-assisted selection for a major QTL

Liu, L., Mu, P., Li, X., et al. (2008) · Euphytica · doi:10.1007/s10681-008-9695-4 · Cited by 22 · see citing works

Genetic mapping and QTL analysis for yield and agronomic traits with an F2:3 population derived from a waxy corn × sweet corn cross

Park, K. J., Jin, K., Kim, B. W., et al. (2013) · Genes & Genomics · doi:10.1007/s13258-013-0157-6 · Cited by 22 · see citing works

THREaD Mapper Studio: a novel, visual web server for the estimation of genetic linkage maps

Cheema, J., Ellis, N., & Dicks, J. L. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq430 · Cited by 21 · see citing works

Sequence diversity, haplotype analysis, association mapping and functional marker development in the waxy and starch synthase IIa genes for grain-yield-related traits in hexaploid wheat (Triticum aestivum L.)

Huang, X.-Q., & Brûlé‐Babel, A. L. (2011) · Molecular Breeding · doi:10.1007/s11032-011-9649-8 · Cited by 17 · see citing works

Mapping quantitative trait loci for growth responses to exogenously applied stress induced hormones in wheat

Castro, A. M., Tacaliti, M. S., Giménez, D., et al. (2008) · Euphytica · doi:10.1007/s10681-008-9694-5 · Cited by 15 · see citing works

Detection and integration of gene mapping of downy mildew resistance in maize inbred lines though linkage and association

Phumichai, C., Chunwongse, J., Jampatong, S., Grudloyma, P., Pulam, T., Doungchan, W., Wongkaew, A., & Kongsiri, N. (2012) · Euphytica · doi:10.1007/s10681-012-0699-8 · Cited by 13 · see citing works

Genotype × Environment Interactions for Agronomic Traits of Rice Revealed by Association Mapping

Xu, Feifei, Tang, et al. (2014) · Acta Scientiarum Naturalium Universitatis Sunyatseni · Cited by 13 · see citing works

Molecular Markers Based Approaches for Drought Tolerance

Sehgal, D., & Yadav, R. S. (2009) · Springer eBooks · doi:10.1007/978-90-481-2967-6_9 · Cited by 4 · see citing works

Impact of Climate Change on Crops Adaptation and Strategies to Tackle Its Outcome: A Review

Raza, A., Razzaq, A., Mehmood, S. S., Zou, X., Zhang, X., Lv, Y., & Xu, J. (2019) · Plants · doi:10.3390/plants8020034 · Cited by 1,762 · see citing works

Quantitative Trait Loci Mapping

Xiong, D.-H., Liu, J., Guo, Y.-F., Guo, Y., Yang, T., Jiang, H., Chen, Y., Yang, F., Recker, R. R., & Deng, H. (2008) · Methods in molecular biology · doi:10.1007/978-1-59745-104-8_16 · Cited by 3 · see citing works

New advances on the study of linkage mapping and association mapping of cotton quantitative traits

Wang, Q. (2013) · Guangdong nongye kexue

Trait Mapping Approaches Through Linkage Mapping in Plants

Kulwal, P. L. (2018) · Advances in biochemical engineering, biotechnology · doi:10.1007/10_2017_49 · Cited by 20 · see citing works

Association mapping, a method to detect quantitative trait loci: statistical bases

Ernesto, G. G., Fernanda, Á. V. M., & Mosquera, T. (2011) · Agronomía Colombiana · Cited by 12 · see citing works

Association Mapping in Crops Plants

Bangarwa, S. K., Kumawat, R., Barupal, H. L., et al. (2020) · International Journal of Current Microbiology and Applied Sciences · doi:10.20546/ijcmas.2020.909.161 · Cited by 4 · see citing works