GEM-Selektor geochemical modeling package: revised algorithm and GEMS3K numerical kernel for coupled simulation codes
Open accessThe claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Parkhurst, D. L., & Appelo, C. A. J. (1999) · doi:10.3133/wri994259 · Cited by 7,647 · see citing works
Trefethen, L. N., & Bau, III (1997) · doi:10.1137/1.9780898719574 · Cited by 3,301 · see citing works
Trefethen, L. N., & Bau, D. A. (2008) · Choice Reviews Online · doi:10.5860/choice.45-5628 · Cited by 2,767 · see citing works
FactSage thermochemical software and databases
Bale, C. W., Chartrand, P., Degterov, S. A., Eriksson, G., Hack, K., Mahfoud, R. B., Melançon, J., Pelton, A. D., & Petersen, S. (2002) · Calphad · doi:10.1016/s0364-5916(02)00035-4 · Cited by 2,298 · see citing works
Connolly, J. A. D. (2005) · Earth and Planetary Science Letters · doi:10.1016/j.epsl.2005.04.033 · Cited by 2,250 · see citing works
FactSage thermochemical software and databases — recent developments
Bale, C. W., Bélisle, È., Chartrand, P., Decterov, S. A., Eriksson, G., Hack, K., Jung, I., Kang, Y., Melançon, J., Pelton, A. D., et al. (2008) · Calphad · doi:10.1016/j.calphad.2008.09.009 · Cited by 1,670 · see citing works
Solving Nonlinear Equations with Newton's Method
Kelley, C. T. (2003) · Society for Industrial and Applied Mathematics eBooks · doi:10.1137/1.9780898718898 · Cited by 1,130 · see citing works
Computational thermodynamics: the Calphad method
(2008) · Choice Reviews Online · doi:10.5860/choice.45-6195 · Cited by 1,125 · see citing works
Lukas, H. L., Fries, S. G., & Sundman, B. (2007) · Cambridge University Press eBooks · doi:10.1017/cbo9780511804137 · Cited by 979 · see citing works
The computation of equilibrium assemblage diagrams with Theriak/Domino software
de Capitani, C., & Petrakakis, K. (2010) · American Mineralogist · doi:10.2138/am.2010.3354 · Cited by 829 · see citing works
Kolditz, O., Bauer, S., Bilke, L., et al. (2012) · Environmental Earth Sciences · doi:10.1007/s12665-012-1546-x · Cited by 765 · see citing works
Reactive transport modeling: An essential tool and a new research approach for the Earth sciences
Steefel, C. I., DePaolo, D. J., & Lichtner, P. C. (2005) · Earth and Planetary Science Letters · doi:10.1016/j.epsl.2005.09.017 · Cited by 746 · see citing works
Geochemical and Biogeochemical Reaction Modeling
Bethke, C. M. (2007) · Cambridge University Press eBooks · doi:10.1017/cbo9780511619670 · Cited by 726 · see citing works
Wagner, T., Kulik, D. A., Hingerl, F. F., & Dmytrieva, S. V. (2012) · The Canadian Mineralogist · doi:10.3749/canmin.50.5.1173 · Cited by 621 · see citing works
Self-citationThe computation of chemical equilibrium in complex systems containing non-ideal solutions
de Capitani, C., & Brown, T. H. (1987) · Geochimica et Cosmochimica Acta · doi:10.1016/0016-7037(87)90145-1 · Cited by 604 · see citing works
Reed, M. H., & Spycher, N. F. (1984) · Geochimica et Cosmochimica Acta · doi:10.1016/0016-7037(84)90404-6 · Cited by 476 · see citing works
Bau, M., & Koschinsky, A. (2009) · GEOCHEMICAL JOURNAL · doi:10.2343/geochemj.1.0005 · Cited by 472 · see citing works
Reed, M. H. (1982) · Geochimica et Cosmochimica Acta · doi:10.1016/0016-7037(82)90155-7 · Cited by 467 · see citing works
ChemSage—A computer program for the calculation of complex chemical equilibria
Eriksson, G., & Hack, K. (1990) · Metallurgical Transactions B · doi:10.1007/bf02670272 · Cited by 450 · see citing works
Wang, Y., & Cappellen, P. V. (1996) · Geochimica et Cosmochimica Acta · doi:10.1016/0016-7037(96)00140-8 · Cited by 445 · see citing works
Connolly, J. A. D., & Petrini, K. (2002) · Journal of Metamorphic Geology · doi:10.1046/j.1525-1314.2002.00398.x · Cited by 374 · see citing works
Module-oriented modeling of reactive transport with HYTEC
van der Lee, J., de Windt, L., Lagneau, V., et al. (2003) · Computers & Geosciences · doi:10.1016/s0098-3004(03)00004-9 · Cited by 315 · see citing works
HCh: New potentialities for the thermodynamic simulation of geochemical systems offered by windows
Shvarov, Y. V. (2008) · Geochemistry International · doi:10.1134/s0016702908080089 · Cited by 286 · see citing works
A global model for the early diagenesis of organic carbon and organic phosphorus in marine sediments
Tromp, T. K., Cappellen, P. V., & Key, R. M. (1995) · Geochimica et Cosmochimica Acta · doi:10.1016/0016-7037(95)00042-x · Cited by 219 · see citing works
Engesgaard, P., & Kipp, K. L. (1992) · Water Resources Research · doi:10.1029/92wr01264 · Cited by 199 · see citing works
Karpov, I. K., Чудненко, К. В., & Kulik, D. A. (1997) · American Journal of Science · doi:10.2475/ajs.297.8.767 · Cited by 170 · see citing works
Self-citationA parallel finite element scheme for thermo-hydro-mechanical (THM) coupled problems in porous media
Wang, W., Kosakowski, G., & Kolditz, O. (2009) · Computers & Geosciences · doi:10.1016/j.cageo.2008.07.007 · Cited by 153 · see citing works
Self-citationNakagawa, T., Tackley, P. J., Deschamps, F., et al. (2009) · Geochemistry Geophysics Geosystems · doi:10.1029/2008gc002280 · Cited by 111 · see citing works
Present state and future directions of modeling of geochemistry in hydrogeological systems
van der Lee, J., & de Windt, L. (2001) · Journal of Contaminant Hydrology · doi:10.1016/s0169-7722(00)00155-8 · Cited by 97 · see citing works
Dolejš, D., & Wagner, T. (2007) · Geochimica et Cosmochimica Acta · doi:10.1016/j.gca.2007.10.022 · Cited by 91 · see citing works
Self-citationPHT3D: A Reactive Multicomponent Transport Model for Saturated Porous Media
Appelo, C. A. J., & Rolle, M. (2010) · Ground Water · doi:10.1111/j.1745-6584.2010.00732.x · Cited by 88 · see citing works
Modeling reactive transport in non-ideal aqueous–solid solution system
Shao, H., Dmytrieva, S. V., Kolditz, O., et al. (2009) · Applied Geochemistry · doi:10.1016/j.apgeochem.2009.04.001 · Cited by 82 · see citing works
Self-citationUnusual rare earth element fractionation in a tin-bearing magmatic-hydrothermal system
Monecke, T., Kempe, U., Trinkler, M., et al. (2011) · Geology · doi:10.1130/g31659.1 · Cited by 81 · see citing works
Centler, F., Shao, H., Biase, C. D., et al. (2009) · Computers & Geosciences · doi:10.1016/j.cageo.2009.06.009 · Cited by 72 · see citing works
Modelling Chemical Equilibrium Partitioning with the GEMS-PSI Code
Kulik, D. A., Berner, U. R., & Curti, E. (2004) · Cited by 68 · see citing works
Self-citationAlgorithms for the estimation of phase stability in heterogeneous thermodynamic systems
Ghiorso, M. S. (1994) · Geochimica et Cosmochimica Acta · doi:10.1016/0016-7037(94)90245-3 · Cited by 67 · see citing works
Singh, A. K., Goerke, U.-J., & Kolditz, O. (2011) · Energy · doi:10.1016/j.energy.2011.03.049 · Cited by 66 · see citing works
Hudson‐Edwards, A., Astiz, C. Z., & Lopez, D. (1979) · Medical Entomology and Zoology · Cited by 63 · see citing works
Numerical modelling of spontaneous slab breakoff dynamics during continental collision
Baumann, C., Gerya, T., & Connolly, J. A. D. (2010) · Geological Society London Special Publications · doi:10.1144/sp332.7 · Cited by 61 · see citing works
Karpov, I. K. (2002) · American Journal of Science · doi:10.2475/ajs.302.4.281 · Cited by 59 · see citing works
Modeling coupled biogeochemical cycles
Rastetter, E. B. (2011) · Frontiers in Ecology and the Environment · doi:10.1890/090223 · Cited by 45 · see citing works
Eriksson, G., & Thompson, W. T. (1989) · Calphad · doi:10.1016/0364-5916(89)90027-8 · Cited by 44 · see citing works
A parallel FE–FV scheme to solve fluid flow in complex geologic media
Coumou, D., Matthai, S. K., Geiger, S., et al. (2008) · Computers & Geosciences · doi:10.1016/j.cageo.2007.11.010 · Cited by 42 · see citing works
Tenzer, H., Park, C., Kolditz, O., et al. (2010) · Environmental Earth Sciences · doi:10.1007/s12665-009-0403-z · Cited by 40 · see citing works
A Reactive Multicomponent Transport Model for Saturated Porous Media
Prommer, H., & Post, V. (2006) · Cited by 39 · see citing works
Hammond, G. E., Lichtner, P., & Lu, C. J. (2007) · Journal of Physics Conference Series · doi:10.1088/1742-6596/78/1/012025 · Cited by 29 · see citing works
Bruno, J., & Mompeán, F. J. (2007) · OECD eBooks · Cited by 26 · see citing works
Kulik, D. A. (2006) · Interface science and technology · doi:10.1016/s1573-4285(06)80051-7 · Cited by 23 · see citing works
Self-citationMcDermott, C. I., Walsh, R., Mettier, R., et al. (2008) · Computational Geosciences · doi:10.1007/s10596-008-9123-9 · Cited by 22 · see citing works
A geochemical transport model for thermo‐hydro‐chemical (THC) coupled processes with saline water
Xie, M., Kolditz, O., & Moog, H. C. (2011) · Water Resources Research · doi:10.1029/2010wr009270 · Cited by 21 · see citing works
Chemical Thermodynamics of Solid Solutions of Interest in Radioactive Waste Management
OECD, & Nuclear Energy Agency (2007) · Chemical thermodynamics · doi:10.1787/9789264033191-en · Cited by 20 · see citing works
Peng, Y.-C., & 彭彥植 (2010) · Cited by 19 · see citing works
Pfingsten, W. (1996) · Nuclear Technology · doi:10.13182/nt96-a35301 · Cited by 17 · see citing works
Kulik, D. A. (2006) · Radiochimica Acta · doi:10.1524/ract.2006.94.9-11.765 · Cited by 17 · see citing works
Self-citationShao, H., Kulik, D. A., Berner, U. R., et al. (2009) · GEOCHEMICAL JOURNAL · doi:10.2343/geochemj.1.0069 · Cited by 14 · see citing works
Self-citationFor�s, M., Duran, M., Solà, M., & Adamowicz, L. (2000) · Journal of Computational Chemistry · doi:10.1002/(sici)1096-987x(200003)21:4 · Cited by 12 · see citing works
Shvarov, Y. V. (1989) · Sciences Géologiques Bulletin · doi:10.3406/sgeol.1989.1836 · Cited by 11 · see citing works
PreMDB, a thermodynamically consistent material database as a key to geodynamic modelling
Siret, D., Poulet, T., Regenauer‐Lieb, K., et al. (2008) · Acta Geotechnica · doi:10.1007/s11440-008-0065-0 · Cited by 10 · see citing works
(2013) · IMPERIAL COLLEGE PRESS eBooks · doi:10.1142/9781783263370_0007 · Cited by 2 · see citing works
OpenGeoSys-GEMS: Hybrid parallelization of a reactive transport code with MPI and threads
Kosakowski, G., Kulik, D. A., & Shao, H. (2012) · EGUGA · Cited by 1 · see citing works
Self-citation
Flagged first, then by citations
Research works printed but not linked: 3
- [29]29. Kolditz, O., Görke, U.-J., Shao, H., Wang, W. (eds.): Benchmarks and Examples for Thermo-Hydro-Mechanical/ Chemical Processes in Porous Media. Series: Lecture Notes in Computational Science and Engineering, vol. 86. Springer, Berlin (2012)
- [34]34. Kulik, D.A.: Standard molar Gibbs energies and activity coefficients of surface complexes (thermodynamic insights). In: Luetzenkirchen, J. (ed.) Surface Complexation Mod- elling. Interface Science and Technology, vol. 11, pp. 171-250. Elsevier, Amsterdam (2006)
- [63]63. Westall, J.C., Zachary, J.L., Morel, F.M.M.: MINEQL: A Compact Program for Computation of Chemical Equilib- ria in Aquatic Systems. R.M. Parsons Laboratory for Water Resources and Hydrodynamics, Massachusetts Institute of Technology, Cambridge, MA (1976)
Cited by
Sorted by citations
Lothenbach, B., Kulik, D. A., Matschei, T., Balonis, M., Baquerizo, L., Dilnesa, B., Miron, G. D., & Myers, R. J. (2019) · Cement and Concrete Research · doi:10.1016/j.cemconres.2018.04.018 · Cited by 1,250 · see citing works
Self-citationWagner, T., Kulik, D. A., Hingerl, F. F., & Dmytrieva, S. V. (2012) · The Canadian Mineralogist · doi:10.3749/canmin.50.5.1173 · Cited by 621 · see citing works
Self-citationMechanisms of carbonation hydration hardening in Portland cements
Zajac, M., Irbe, L., Bullerjahn, F., Hilbig, H., & Ben Haha, M. (2022) · Cement and Concrete Research · doi:10.1016/j.cemconres.2021.106687 · Cited by 262 · see citing works
Phase diagrams for alkali-activated slag binders
Myers, R. J., Bernal, S. A., & Provis, J. L. (2017) · Cement and Concrete Research · doi:10.1016/j.cemconres.2017.02.006 · Cited by 241 · see citing works
Thermodynamic modelling of alkali-activated slag cements
Myers, R. J., Lothenbach, B., Bernal, S. A., & Provis, J. L. (2015) · Applied Geochemistry · doi:10.1016/j.apgeochem.2015.06.006 · Cited by 240 · see citing works
Carbonation of calcium sulfoaluminate mortars
Hargis, C. W., Lothenbach, B., Müller, C. J., & Winnefeld, F. (2017) · Cement and Concrete Composites · doi:10.1016/j.cemconcomp.2017.03.003 · Cited by 210 · see citing works
Impact of water activity on the stability of ettringite
Baquerizo, L. G., Matschei, T., & Scrivener, K. L. (2016) · Cement and Concrete Research · doi:10.1016/j.cemconres.2015.07.008 · Cited by 164 · see citing works
Chloride binding in Portland composite cements containing metakaolin and silica fume
Babaahmadi, A., Machner, A., Kunther, W., Figueira, J., Hemstad, P., & De Weerdt, K. (2022) · Cement and Concrete Research · doi:10.1016/j.cemconres.2022.106924 · Cited by 130 · see citing works
Zhang, Y., & Çopuroğlu, O. (2022) · Cement and Concrete Composites · doi:10.1016/j.cemconcomp.2022.104642 · Cited by 59 · see citing works
“Thermodynamic modelling was done using the Gibbs free energy minimization program GEMS [27,28] with thermodynamic data from the PSI-GEMS database [29,30] supplemented by cement specific data [31,32].”
MethodDe Weerdt, K. (2021) · Materials and Structures · doi:10.1617/s11527-021-01793-9 · Cited by 57 · see citing works
Saeki, N., Kurihara, R., Ohkubo, T., Teramoto, A., Suda, Y., Kitagaki, R., & Maruyama, I. (2025) · Cement and Concrete Research · doi:10.1016/j.cemconres.2024.107777 · Cited by 48 · see citing works
Thermodynamic Modeling and Experimental Study of Carbonation of Alkali-Activated Slag Cements
Park, S., Lothenbach, B., Jang, J. G., Kim, H.-K., & Lee, N. (2023) · ACS Sustainable Chemistry & Engineering · doi:10.1021/acssuschemeng.2c05789 · Cited by 43 · see citing works
Determination of sulfate content in OPC and CSA cement by sodium carbonate extraction method
Hou, W., Liu, Z., Huang, J., Yuan, Q., & He, F. (2021) · Construction and Building Materials · doi:10.1016/j.conbuildmat.2020.122056 · Cited by 17 · see citing works
Measuring chloride binding in cementitious materials: A review by RILEM TC 298-EBD
Georget, F., Babaahmadi, A., Machner, A., Mrak, M., Dolenec, S., Xiong, Q. X., Shiju, J., Snoeck, D., Suraneni, P., & Wilson, W. (2025) · Materials and Structures · doi:10.1617/s11527-025-02802-x · Cited by 10 · see citing works
- Authors
- Kulik, D. A., Wagner, T., Dmytrieva, S. V., Kosakowski, G., Hingerl, F. F., Chudnenko, K. V., & Berner, U. R.
- Affiliations
- Paul Scherrer Institute (CH)
- ETH Zurich (CH)
- The Institute of Environmental Geochemistry of National Academy of Sciences of Ukraine (UA)
- Corresponding author
- Kulik, Dmitrii A.
- Venue
- Computational Geosciences
- Published
- 2012-08-24
- ISSN
- 1420-0597 (ISSN-L)
- 1573-1499
- OpenAlex
- W2085016580
- Cited by
- 936
- References
- 61
- Citations by year
- 2026: 37 · 2025: 99 · 2024: 124 · 2023: 104 · 2022: 98 · 2021: 88 · 2020: 89 · 2019: 48 · 2018: 71 · 2017: 62 · 2016: 33 · 2015: 34 · 2014: 27 · 2013: 18 · 2012: 4
- FWCI
- 21.97
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Computational Geosciences (publishedVersion)
- reroDoc Digital Library (submittedVersion)
- DORA PSI (Paul Scherrer Institute) (submittedVersion, other-oa)
- Repository for Publications and Research Data (ETH Zurich) (submittedVersion, other-oa)
- ETH Zürich Research Collection
- Topics
- Physical Sciences › Environmental Science › Environmental Engineering › Groundwater flow and contamination studies
- Physical Sciences › Environmental Science › Environmental Engineering › CO2 Sequestration and Geologic Interactions
- Physical Sciences › Earth and Planetary Sciences › Geochemistry and Petrology › Groundwater and Isotope Geochemistry
- Keywords
- geochemical modeling, interior point methods, operator splitting, chemical equilibrium, non-ideal solutions, high-performance computing
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review