Cited by 16

The DOI matches its Crossref record; 8 of the 8 references it cites were found in a registry or an index.

The E3 ubiquitin ligase MARCHF6 as a metabolic integrator in cholesterol synthesis and beyond

Scott, Nicola A., Sharpe, Laura J., Brown, Andrew J.·2021·Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids

Abstract

MARCHF6 is a large multi-pass E3 ubiquitin ligase embedded in the membranes of the endoplasmic reticulum. It participates in endoplasmic reticulum associated degradation, including autoubiquitination, and many of its identified substrates are involved in sterol and lipid metabolism. Post-translationally, MARCHF6 expression is attuned to cholesterol status, with high cholesterol preventing its degradation and hence boosting MARCHF6 levels. By modulating MARCHF6 activity, cholesterol may regulate other aspects of cell metabolism beyond the known repertoire. Whilst we have learnt much about MARCHF6 in the past decade, there are still many more mysteries to be unravelled to fully understand its regulation, substrates, and role in human health and disease.

Overview

Integrity signals

Registry

Crossref · 10.1016/j.bbalip.2020.158837

Cites

8 of 8 references verified0 citation errors · 0 not checkable

Statistics

Recomputing p-values needs the paper’s full text.

Verification

Claims the paper makes

This paper’s full text isn’t openly available, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 82

  1. Varshavsky, 2017, The ubiquitin system, autophagy, and regulated protein degradation, Annu. Rev. Biochem., 86, 123, 10.1146/annurev-biochem-061516-044859 · DOI
  2. Kitada, 1998, Mutations in the parkin gene cause autosomal recessive juvenile parkinsonism, Nature, 392, 605, 10.1038/33416 · DOI · Paper page
  3. Densham, 2017, The BRCA1 ubiquitin ligase function sets a new trend for remodelling in DNA repair, Nucleus, 8, 116, 10.1080/19491034.2016.1267092 · DOI
  4. Skaar, 2014, SCF ubiquitin ligase-targeted therapies, Nat. Rev. Drug Discov., 13, 889, 10.1038/nrd4432 · DOI
  5. Lin, 2019, The membrane-associated MARCH E3 ligase family: emerging roles in immune regulation, Front. Immunol., 10, 1751, 10.3389/fimmu.2019.01751 · DOI · Paper page
  6. Bauer, 2017, Overview of the membrane-associated RING-CH (MARCH) E3 ligase family, New Biotechnol., 38, 7, 10.1016/j.nbt.2016.12.002 · DOI
  7. Hassink, 2005, TEB4 is a C4HC3 RING finger-containing ubiquitin ligase of the endoplasmic reticulum, Biochem. J., 388, 647, 10.1042/BJ20041241 · DOI
  8. Mehrtash, 2019, Ubiquitin-dependent protein degradation at the endoplasmic reticulum and nuclear envelope, Semin. Cell Dev. Biol., 93, 111, 10.1016/j.semcdb.2018.09.013 · DOI
  9. Nagase, 1998, Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro, DNA Res., 5, 31, 10.1093/dnares/5.1.31 · DOI
  10. Swanson, 2001, A conserved ubiquitin ligase of the nuclear envelope/endoplasmic reticulum that functions in both ER-associated and Matα2 repressor degradation, Genes Dev., 15, 2660, 10.1101/gad.933301 · DOI
  11. Cerruti Mainardi, 2006, Cri du Chat syndrome, Orphanet J. Rare Dis., 1, 10.1186/1750-1172-1-33 · DOI
  12. Nguyen, 2015, 5p deletions: current knowledge and future directions, Am. J. Med. Genet. Part C Semin. Med. Genet., 169, 224, 10.1002/ajmg.c.31444 · DOI
  13. Florian, 2019, Unstable TTTTA/TTTCA expansions in MARCH6 are associated with Familial Adult Myoclonic Epilepsy type 3, Nat. Commun., 10, 4919, 10.1038/s41467-019-12763-9 · DOI
  14. Wang, 2012, A novel locus for body mass index on 5p15.2: a meta-analysis of two genome-wide association studies, Gene, 500, 80, 10.1016/j.gene.2012.03.046 · DOI
  15. Coates, 2019, Consulting prostate cancer cohort data uncovers transcriptional control: regulation of the MARCH6 gene, Biochim. Biophys. Acta Mol. Cell Biol. Lipids, 1864, 1656, 10.1016/j.bbalip.2019.08.006 · DOI
  16. Zelcer, 2009, LXR regulates cholesterol uptake through idol-dependent ubiquitination of the LDL receptor, Science, 325, 100, 10.1126/science.1168974 · DOI · Paper page
  17. Cook, 2017, Identification of the ER-resident E3 ubiquitin ligase RNF145 as a novel LXR-regulated gene, PLoS One, 12, 10.1371/journal.pone.0172721 · DOI
  18. Sharpe, 2019, Cholesterol increases protein levels of the E3 ligase MARCH6 and thereby stimulates protein degradation, J. Biol. Chem., 294, 2436, 10.1074/jbc.RA118.005069 · DOI
  19. Kreft, 2006, Membrane topology of the yeast endoplasmic reticulum-localized ubiquitin ligase Doa10 and comparison with its human ortholog TEB4 (MARCH-VI), J. Biol. Chem., 281, 4646, 10.1074/jbc.M512215200 · DOI
  20. Nakamura, 2011, The role of the transmembrane RING finger proteins in cellular and organelle function, Membranes (Basel), 1, 354, 10.3390/membranes1040354 · DOI
  21. Fernandez-Leiro, 2016, Unravelling biological macromolecules with cryo-electron microscopy, Nature, 537, 339, 10.1038/nature19948 · DOI
  22. Zattas, 2016, A conserved c-terminal element in the yeast doa10 and human MARCH6 ubiquitin ligases required for selective substrate degradation, J. Biol. Chem., 291, 12105, 10.1074/jbc.M116.726877 · DOI
  23. Kreft, 2011, An unusual transmembrane helix in the endoplasmic reticulum ubiquitin ligase Doa10 modulates degradation of its cognate E2 enzyme, J. Biol. Chem., 286, 20163, 10.1074/jbc.M110.196360 · DOI
  24. Fenech, 2020, Interaction mapping of endoplasmic reticulum ubiquitin ligases identifies modulators of innate immune signalling, Elife, 9, 1, 10.7554/eLife.57306 · DOI
  25. Schmidt, 2020, Doa10 is a membrane protein retrotranslocase in ER-associated protein degradation, Elife, 9, 10.7554/eLife.56945 · DOI
  26. Vasic, 2020, Hrd1 forms the retrotranslocation pore regulated by auto-ubiquitination and binding of misfolded proteins, Nat. Cell Biol., 22, 274, 10.1038/s41556-020-0473-4 · DOI
  27. Peterson, 2019, Cycles of autoubiquitination and deubiquitination regulate the erad ubiquitin ligase hrd1, Elife., 8, 10.7554/eLife.50903 · DOI
  28. Hulce, 2013, Proteome-wide mapping of cholesterol-interacting proteins in mammalian cells, Nat. Methods, 10, 259, 10.1038/nmeth.2368 · DOI
  29. Menzies, 2018, The sterol-responsive RNF145 E3 ubiquitin ligase mediates the degradation of HMG-CoA reductase together with gp78 and hrd1, Elife, 7, 40009, 10.7554/eLife.40009 · DOI
  30. Irisawa, 2009, The sterol-sensing endoplasmic reticulum (ER) membrane protein TRC8 hampers ER to golgi transport of sterol regulatory element-binding protein-2 (SREBP-2)/SREBP cleavage-activated protein and reduces SREBP-2 cleavage, J. Biol. Chem., 284, 28995, 10.1074/jbc.M109.041376 · DOI · Paper page
  31. Lee, 2010, The TRC8 ubiquitin ligase is sterol regulated and interacts with lipid and protein biosynthetic pathways, Mol. Cancer Res., 8, 93, 10.1158/1541-7786.MCR-08-0491 · DOI · Paper page
  32. Scott, 2020, The cholesterol synthesis enzyme lanosterol 14α-demethylase is post-translationally regulated by the E3 ubiquitin ligase MARCH6, Biochem. J., 477, 541, 10.1042/BCJ20190647 · DOI · Paper page
  33. Stefanovic-Barrett, 2018, MARCH6 and TRC8 facilitate the quality control of cytosolic and tail-anchored proteins, EMBO Rep., 19, 10.15252/embr.201745603 · DOI
  34. Weber, 2016, Sequential poly-ubiquitylation by specialized conjugating enzymes expands the versatility of a quality control ubiquitin ligase, Mol. Cell, 63, 827, 10.1016/j.molcel.2016.07.020 · DOI
  35. Wang, 2009, Ube2j2 ubiquitinates hydroxylated amino acids on ER-associated degradation substrates, J. Cell Biol., 187, 655, 10.1083/jcb.200908036 · DOI
  36. Tatham, 2013, Ube2W conjugates ubiquitin to α-amino groups of protein N-termini, Biochem. J., 453, 137, 10.1042/BJ20130244 · DOI
  37. Scaglione, 2013, The ubiquitin-conjugating enzyme (E2) ube2w ubiquitinates the N terminus of substrates, J. Biol. Chem., 288, 18784, 10.1074/jbc.C113.477596 · DOI
  38. Clague, 2019, Breaking the chains: deubiquitylating enzyme specificity begets function, Nat. Rev. Mol. Cell Biol., 20, 338, 10.1038/s41580-019-0099-1 · DOI
  39. Nakamura, 2014, Ubiquitin-specific protease 19 regulates the stability of the E3 ubiquitin ligase MARCH6, Exp. Cell Res., 328, 207, 10.1016/j.yexcr.2014.07.025 · DOI
  40. De Bie, 2011, Ubiquitination of E3 ligases: self-regulation of the ubiquitin system via proteolytic and non-proteolytic mechanisms, Cell Death Differ., 18, 1393, 10.1038/cdd.2011.16 · DOI · Paper page
  41. Zelcer, 2014, The E3 ubiquitin ligase MARCH6 degrades squalene monooxygenase and affects 3-hydroxy-3-methyl-glutaryl coenzyme A reductase and the cholesterol synthesis pathway, Mol. Cell. Biol., 34, 1262, 10.1128/MCB.01140-13 · DOI · Paper page
  42. Gill, 2011, Cholesterol-dependent degradation of squalene monooxygenase, a control point in cholesterol synthesis beyond HMG-CoA reductase, Cell Metab., 13, 260, 10.1016/j.cmet.2011.01.015 · DOI · Paper page
  43. Jo, 2010, Control of cholesterol synthesis through regulated ER-associated degradation of HMG CoA reductase, Crit. Rev. Biochem. Mol. Biol., 45, 185, 10.3109/10409238.2010.485605 · DOI
  44. Luu, 2014, Signaling regulates activity of DHCR24, the final enzyme in cholesterol synthesis, J. Lipid Res., 55, 410, 10.1194/jlr.M043257 · DOI
  45. Nguyen, 2019, N-terminal acetylation and the N-end rule pathway control degradation of the lipid droplet protein PLIN2, J. Biol. Chem., 294, 379, 10.1074/jbc.RA118.005556 · DOI · Paper page
  46. Makino, 2016, Acute accumulation of free cholesterol induces the degradation of perilipin 2 and Rab18-dependent fusion of ER and lipid droplets in cultured human hepatocytes, Mol. Biol. Cell, 27, 3293, 10.1091/mbc.E15-10-0730 · DOI
  47. Schultz, 2018, Coordinate regulation of mutant NPC1 degradation by selective ER autophagy and MARCH6-dependent ERAD, Nat. Commun., 9, 3671, 10.1038/s41467-018-06115-2 · DOI
  48. Wang, 2008, Degradation of the bile salt export pump at endoplasmic reticulum in progressive familial intrahepatic cholestasis type II, Hepatology, 48, 1558, 10.1002/hep.22499 · DOI
  49. Zavacki, 2009, The E3 ubiquitin ligase TEB4 mediates degradation of type 2 iodothyronine deiodinase, Mol. Cell. Biol., 29, 5339, 10.1128/MCB.01498-08 · DOI
  50. Park, 2015, Control of mammalian g protein signaling by N-terminal acetylation and the N-end rule pathway, Science., 347, 1249, 10.1126/science.aaa3844 · DOI
  51. van den Boomen, 2020, Ubiquitin-mediated regulation of sterol homeostasis, Curr. Opin. Cell Biol., 65, 103, 10.1016/j.ceb.2020.04.010 · DOI
  52. Luo, 2020, Mechanisms and regulation of cholesterol homeostasis, Nat. Rev. Mol. Cell Biol., 21, 225, 10.1038/s41580-019-0190-7 · DOI · Paper page
  53. Chua, 2020, Squalene monooxygenase: a journey to the heart of cholesterol synthesis, Prog. Lipid Res., 79, 10.1016/j.plipres.2020.101033 · DOI
  54. van de Weijer, 2020, Quality control of ER membrane proteins by the RNF185/Membralin ubiquitin ligase complex, Mol. Cell, 79, 768, 10.1016/j.molcel.2020.07.009 · DOI
  55. Prabhu, 2016, Cholesterol-mediated degradation of 7-dehydrocholesterol reductase switches the balance from cholesterol to Vitamin D synthesis, J. Biol. Chem., 291, 8363, 10.1074/jbc.M115.699546 · DOI
  56. Capell-Hattam, 2020, Twin enzymes, divergent control: the cholesterogenic enzymes DHCR14 and LBR are differentially regulated transcriptionally and post-translationally, J. Biol. Chem., 295, 2850, 10.1074/jbc.RA119.011323 · DOI
  57. Faust, 1982, Regulation of synthesis and degradation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase by low density lipoprotein and 25-hydroxycholesterol in UT-1 cells, Proc. Natl. Acad. Sci., 79, 5205, 10.1073/pnas.79.17.5205 · DOI
  58. Roitelman, 1992, Distinct sterol and nonsterol signals for the regulated degradation of 3-hydroxy-3-methylglutaryl-CoA reductase, J. Biol. Chem., 267, 25264, 10.1016/S0021-9258(19)74035-6 · DOI
  59. Park, 2017, Nitric oxide stimulates cellular degradation of human CYP51A1, the highly conserved lanosterol 14α-demethylase, Biochem. J., 474, 3241, 10.1042/BCJ20170459 · DOI
  60. Sharpe, 2020, Post-translational control of the long and winding road to cholesterol, J. Biol. Chem., 10.1074/jbc.REV120.010723 · DOI
  61. Stieger, 2010, Role of the bile salt export pump, BSEP, in acquired forms of cholestasis, Drug Metab. Rev., 42, 437, 10.3109/03602530903492004 · DOI
  62. Van Mil, 2004, Benign recurrent intrahepatic cholestasis type 2 is caused by mutations in ABCB11, Gastroenterology., 127, 379, 10.1053/j.gastro.2004.04.065 · DOI
  63. Jansen, 1999, Hepatocanalicular bile salt export pump deficiency in patients with progressive familial intrahepatic cholestasis, Gastroenterology, 117, 1370, 10.1016/S0016-5085(99)70287-8 · DOI
  64. Geberhiwot, 2018, Consensus clinical management guidelines for Niemann-Pick disease type C, Orphanet J. Rare Dis., 13, 50, 10.1186/s13023-018-0785-7 · DOI
  65. Gelsthorpe, 2008, Niemann-Pick type C1 I1061T mutant encodes a functional protein that is selected for endoplasmic reticulum-associated degradation due to protein misfolding, J. Biol. Chem., 283, 8229, 10.1074/jbc.M708735200 · DOI
  66. Libby, 2018, Perilipin-2 deletion promotes carbohydrate-mediated browning of white adipose tissue at ambient temperature, J. Lipid Res., 59, 1482, 10.1194/jlr.M086249 · DOI
  67. Takahashi, 2016, Perilipin2 plays a positive role in adipocytes during lipolysis by escaping proteasomal degradation, Sci. Rep., 6, 20975, 10.1038/srep20975 · DOI
  68. Ravid, 2006, Membrane and soluble substrates of the Doa10 ubiquitin ligase are degraded by distinct pathways, EMBO J., 25, 533, 10.1038/sj.emboj.7600946 · DOI
  69. Kimple, 2011, Regulators of G-protein signaling and their Gα substrates: promises and challenges in their use as drug discovery targets, Pharmacol. Rev., 63, 728, 10.1124/pr.110.003038 · DOI
  70. Yang, 2005, Genetic variations of regulator of G-protein signaling 2 in hypertensive patients and in the general population, J. Hypertens., 23, 1497, 10.1097/01.hjh.0000174606.41651.ae · DOI
  71. Heximer, 2003, Hypertension and prolonged vasoconstrictor signaling in RGS2-deficient mice, J. Clin. Invest., 111, 445, 10.1172/JCI15598 · DOI
  72. Hwang, 2010, N-terminal acetylation of cellular proteins creates specific degradation signals, Science., 327, 973, 10.1126/science.1183147 · DOI · Paper page
  73. Zattas, 2015, Ubiquitin-dependent protein degradation at the yeast endoplasmic reticulum and nuclear envelope, Crit. Rev. Biochem. Mol. Biol., 50, 1, 10.3109/10409238.2014.959889 · DOI
  74. Nguyen, 2018, Control of protein degradation by N-terminal acetylation and the N-end rule pathway, Exp. Mol. Med., 50, 1, 10.1038/s12276-018-0097-y · DOI
  75. Howe, 2015, The regulatory domain of squalene monooxygenase contains a re-entrant loop and senses cholesterol via a conformational change, J. Biol. Chem., 290, 27533, 10.1074/jbc.M115.675181 · DOI
  76. Chua, 2017, A conserved degron containing an amphipathic helix regulates the cholesterol-mediated turnover of human squalene monooxygenase, a rate-limiting enzyme in cholesterol synthesis, J. Biol. Chem., 292, 19959, 10.1074/jbc.M117.794230 · DOI
  77. Chua, 2019, Non-canonical ubiquitination of the cholesterol-regulated degron of squalene monooxygenase, J. Biol. Chem., 294, 8134, 10.1074/jbc.RA119.007798 · DOI
  78. Wu, 2020, Structural basis of ER-associated protein degradation mediated by the Hrd1 ubiquitin ligase complex, Science, 368, 1, 10.1126/science.aaz2449 · DOI
  79. Tan, 2020, The MARCH6-SQLE Axis controls endothelial cholesterol homeostasis and angiogenic sprouting, Cell Rep., 32, 107944, 10.1016/j.celrep.2020.107944 · DOI
  80. Watanabe, 2006, Bile acids induce energy expenditure by promoting intracellular thyroid hormone activation, Nature., 439, 484, 10.1038/nature04330 · DOI · Paper page
  81. Sartori, 2008, RGS2 C1114G polymorphism and body weight gain in hypertensive patients, Metabolism, 57, 421, 10.1016/j.metabol.2007.10.021 · DOI
  82. Burslem, 2020, Proteolysis-targeting chimeras as therapeutics and tools for biological discovery, Cell, 181, 102, 10.1016/j.cell.2019.11.031 · DOI · Paper page

Cited by

Sorted by citations

Metadata

Authors
Scott, N. A., Sharpe, L. J., & Brown, A. J.
Venue
Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids
Publisher
Elsevier BV
Published
2021-01
Volume
1866
Issue
1
Pages
158837
ISSN
1388-1981
Cited by
16
References
8
Language
en
Funders
  • Australian Research Council
  • NSW Health

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review