The DOI matches its Crossref record; 47 of the 47 references it cites were found in a registry or an index.
Quantitative Analysis of Hsp90-Client Interactions Reveals Principles of Substrate Recognition
Open accessAbstract
HSP90 is a molecular chaperone that associates with numerous substrate proteins called clients. It plays many important roles in human biology and medicine, but determinants of client recognition by HSP90 have remained frustratingly elusive. We systematically and quantitatively surveyed most human kinases, transcription factors, and E3 ligases for interaction with HSP90 and its cochaperone CDC37. Unexpectedly, many more kinases than transcription factors bound HSP90. CDC37 interacted with kinases, but not with transcription factors or E3 ligases. HSP90::kinase interactions varied continuously over a 100-fold range and provided a platform to study client protein recognition. In wild-type clients, HSP90 did not bind particular sequence motifs, but rather associated with intrinsically unstable kinases. Stabilization of the kinase in either its active or inactive conformation with diverse small molecules decreased HSP90 association. Our results establish HSP90 client recognition as a combinatorial process: CDC37 provides recognition of the kinase family, whereas thermodynamic parameters determine client binding within the family.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“Hsp90 is required for the functional maturation of ~10% of the eukaryotic proteome, including signaling proteins such as GR, a steroid hormone receptor (SHR)1,3,13.”
From Structure of Hsp90–p23–GR reveals the Hsp90 client-remodelling mechanism (2022) · cites this paper as [3]
Experimental — accuracy not yet measuredThe cited source says what the claim attributes to it.
In the citing paper
“Hsp90 is a conserved and essential molecular chaperone responsible for the folding and activation of hundreds of ‘client’ proteins1-3.”
From Structure of Hsp90–p23–GR reveals the Hsp90 client-remodelling mechanism (2022) · cites this paper as [3]
The cited source says what the claim attributes to it.
In the citing paper
“Hsp90 ‘clients’ are enriched in signaling proteins, such as steroid hormone receptors (SHRs), making Hsp90 an important clinical target2–4.”
From Cryo-EM reveals how Hsp90 and FKBP immunophilins co-regulate the glucocorticoid receptor (2023) · cites this paper as [3]
In the citing paper
“The molecular chaperone Hsp90 plays a crucial role in protein homeostasis by regulating the folding and activity of a set of proteins known as clients (1–3).”
From Client binding shifts the populations of dynamic Hsp90 conformations through an allosteric network (2021) · cites this paper as [3]
In the citing paper
“Hsp90 promotes the maturation of a diverse array of metastable signal transduction proteins, including kinases, phosphatases, and ubiquitin ligases (known as Hsp90 clients) [32]. These function in many stress response pathways.”
From Fitness Trade-offs Restrict the Evolution of Resistance to Amphotericin B (2013) · cites this paper as [32]
In the citing paper
“estimates suggesting that Hsp90 associates with more than one-half of the human kinome (Taipale et al., 2012”
From Functional Genomic Screening Reveals Core Modulators of Echinocandin Stress Responses in Candida albicans (2018) · cites this paper as Taipale et al., 2012
In the citing paper
“This is in contrast to other studies that identify only select kinases within a signaling cascade as Hsp90 clients (Taipale et al., 2012”
From Functional Genomic Screening Reveals Core Modulators of Echinocandin Stress Responses in Candida albicans (2018) · cites this paper as Taipale et al., 2012
In the citing paper
“Protein kinases are core transducers of cellular stress and a major class of Hsp90 client proteins”
From Functional Genomic Screening Reveals Core Modulators of Echinocandin Stress Responses in Candida albicans (2018) · cites this paper as Taipale et al., 2012
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
The protein kinase complement of the human genome
Manning, G., Whyte, D. B., Martinez, R., Hunter, T., & Sudarsanam, S. (2002) · Science · doi:10.1126/science.1075762 · Cited by 8,145
Hsp90 as a capacitor for morphological evolution
Rutherford, S. L., & Lindquist, S. (1998) · Nature · doi:10.1038/24550 · Cited by 2,270
Self-citationThe Genetic Landscape of a Cell
Costanzo, M., Baryshnikova, A., Bellay, J., Kim, Y., Spear, E. D., Sevier, C. S., Ding, H., Koh, J. L. Y., Toufighi, K., Mostafavi, S., et al. (2010) · Science · doi:10.1126/science.1180823 · Cited by 2,162
HSP90 at the hub of protein homeostasis: emerging mechanistic insights
Taipale, M., Jarosz, D. F., & Lindquist, S. (2010) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2918 · Cited by 1,818
Self-citationA census of human transcription factors: function, expression and evolution
Vaquerizas, J. M., Kummerfeld, S. K., Teichmann, S. A., & Luscombe, N. M. (2009) · Nature Reviews Genetics · doi:10.1038/nrg2538 · Cited by 1,573
COT drives resistance to RAF inhibition through MAP kinase pathway reactivation
Johannessen, C. M., Boehm, J. S., Kim, S. Y., Thomas, S. R., Wardwell, L., Johnson, L. A., Emery, C. M., Stransky, N., Cogdill, A. P., Barretina, J., et al. (2010) · Nature · doi:10.1038/nature09627 · Cited by 1,460
Hsp90 as a capacitor of phenotypic variation
Queitsch, C., Sangster, T. A., & Lindquist, S. (2002) · Nature · doi:10.1038/nature749 · Cited by 1,372
Self-citationA Helix Propensity Scale Based on Experimental Studies of Peptides and Proteins
Pace, C. N., & Scholtz, J. M. (1998) · Biophysical Journal · doi:10.1016/s0006-3495(98)77529-0 · Cited by 1,074
Protein kinases: evolution of dynamic regulatory proteins
Taylor, S. S., & Kornev, A. P. (2010) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2010.09.006 · Cited by 940
Li, W., Bengtson, M. H., Ulbrich, A., Matsuda, A., Reddy, V. A., Orth, A. P., Chanda, S. K., Batalov, S., & Joazeiro, C. A. P. (2008) · PLoS ONE · doi:10.1371/journal.pone.0001487 · Cited by 875
High-Throughput Mapping of a Dynamic Signaling Network in Mammalian Cells
Barrios‐Rodiles, M., Brown, K. R., Ozdamar, B., Bose, R., Liu, Z., Donovan, R. S., Shinjo, F., Liu, Y., Dembowy, J., Taylor, I. W., et al. (2005) · Science · doi:10.1126/science.1105776 · Cited by 726
Hsc70/Hsp90 Chaperone Machinery Mediates ATP-Dependent RISC Loading of Small RNA Duplexes
Iwasaki, S., Kobayashi, M., Yoda, M., Sakaguchi, Y., Katsuma, S., Suzuki, T., & Tomari, Y. (2010) · Molecular Cell · doi:10.1016/j.molcel.2010.05.015 · Cited by 507
Allosteric inhibitors of Bcr-abl–dependent cell proliferation
Adrián, F., Ding, Q., Sim, T., Velentza, A. V., Sloan, C., Liu, Y., Zhang, G., Hur, W., Ding, S., Manley, P. W., et al. (2006) · Nature Chemical Biology · doi:10.1038/nchembio760 · Cited by 385
A systematic interaction map of validated kinase inhibitors with Ser/Thr kinases
Fedorov, O., Marsden, B. D., Pogačić, V., Rellos, P., Müller, S., Bullock, A. N., Schwaller, J., Sundström, M., & Knapp, S. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0708800104 · Cited by 362
Hsp90 and Environmental Stress Transform the Adaptive Value of Natural Genetic Variation
Jarosz, D. F., & Lindquist, S. (2010) · Science · doi:10.1126/science.1195487 · Cited by 346
Self-citationConformational dynamics of the molecular chaperone Hsp90
Krukenberg, K. A., Street, T. O., Lavery, L. A., & Agard, D. A. (2011) · Quarterly Reviews of Biophysics · doi:10.1017/s0033583510000314 · Cited by 308
A Molecular Brake in the Kinase Hinge Region Regulates the Activity of Receptor Tyrosine Kinases
Chen, H., Ma, J., Li, W., Eliseenkova, A. V., Xu, C., Neubert, T. A., Miller, W. T., & Mohammadi, M. (2007) · Molecular Cell · doi:10.1016/j.molcel.2007.06.028 · Cited by 300
Structure of an Hsp90-Cdc37-Cdk4 Complex
Vaughan, C. K., Gohlke, U., Sobott, F., Good, V. M., Ali, M. M. U., Prodromou, C., Robinson, C. V., Saibil, H. R., & Pearl, L. H. (2006) · Molecular Cell · doi:10.1016/j.molcel.2006.07.016 · Cited by 291
Boulon, S., Pradet‐Balade, B., Verheggen, C., Molle, D., Boireau, S., Georgieva, M., Azzag, K., Robert, M.-C., Ahmad, Y., Neel, H., et al. (2010) · Molecular Cell · doi:10.1016/j.molcel.2010.08.023 · Cited by 289
hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes
Lamesch, P., Li, N., Milstein, S., Fan, C., Hao, T., Szabo, G., Hu, Z., Venkatesan, K., Bethel, G., Martin, P., et al. (2007) · Genomics · doi:10.1016/j.ygeno.2006.11.012 · Cited by 276
Hsp90 prevents phenotypic variation by suppressing the mutagenic activity of transposons
Specchia, V., Piacentini, L., Tritto, P., Fanti, L., D’Alessandro, R., Palumbo, G., Pimpinelli, S., & Bozzetti, M. P. (2010) · Nature · doi:10.1038/nature08739 · Cited by 263
p50cdc37 Acting in Concert with Hsp90 Is Required for Raf-1 Function
Grammatikakis, N., Lin, J.-H., Grammatikakis, A., Tsichlis, P. N., & Cochran, B. (1999) · Molecular and Cellular Biology · doi:10.1128/mcb.19.3.1661 · Cited by 260
Dias, S. D. R., Friedlos, F., Light, Y., Springer, C. J., Workman, P., & Marais, R. (2005) · Cancer Research · doi:10.1158/0008-5472.can-05-2632 · Cited by 246
Influence of conservation on calculations of amino acid covariance in multiple sequence alignments
Fodor, A. A., & Aldrich, R. W. (2004) · Proteins Structure Function and Bioinformatics · doi:10.1002/prot.20098 · Cited by 238
Ying, W., Du, Z., Sun, L., Foley, K. P., Proia, D. A., Blackman, R. K., Zhou, D., Inoue, T., Tatsuta, N., Sang, J., et al. (2011) · Molecular Cancer Therapeutics · doi:10.1158/1535-7163.mct-11-0755 · Cited by 232
Hsp90 Recognizes a Common Surface on Client Kinases
Citri, A., Harari, D., Shohat-Ophir, G., Ramakrishnan, P., Gan, J., Lavi, S., Eisenstein, M., Kimchi, A., Wallach, D., Pietrokovski, S., et al. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m512613200 · Cited by 222
High yield bacterial expression of active c‐Abl and c‐Src tyrosine kinases
Seeliger, M. A., Young, M. A., Henderson, M. N., Pellicena, P., King, D., Falick, A. M., & Kuriyan, J. (2005) · Protein Science · doi:10.1110/ps.051750905 · Cited by 220
Chaperoning steroid hormone action
Picard, D. (2006) · Trends in Endocrinology and Metabolism · doi:10.1016/j.tem.2006.06.003 · Cited by 190
NLR sensors meet at the SGT1–HSP90 crossroad
Kadota, Y., Shirasu, K., & Guérois, R. (2010) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2009.12.005 · Cited by 186
Molecular chaperones and protein kinase quality control
Caplan, A. J., Mandal, A. K., & Theodoraki, M. A. (2006) · Trends in Cell Biology · doi:10.1016/j.tcb.2006.12.002 · Cited by 185
Xu, Y., Singer, M. A., & Lindquist, S. L. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.1.109 · Cited by 184
Self-citationSurface charge and hydrophobicity determine ErbB2 binding to the Hsp90 chaperone complex
Xu, W., Yuan, X., Xiang, Z., Mimnaugh, E. G., Marcu, M. G., & Neckers, L. (2005) · Nature Structural & Molecular Biology · doi:10.1038/nsmb885 · Cited by 152
The Hsp90 Chaperone Machinery Regulates Signaling by Modulating Ligand Binding Clefts
Pratt, W. B., Morishima, Y., & Osawa, Y. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.r800023200 · Cited by 151
Conserved Conformational Changes in the ATPase Cycle of Human Hsp90
Richter, K., Soroka, J., Skalniak, Ł., Leskovar, A., Heßling, M., Reinstein, J., & Büchner, J. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m800540200 · Cited by 145
The minimal kinome of Giardia lamblia illuminates early kinase evolution and unique parasite biology
Manning, G., Reiner, D. S., Lauwaet, T., Dacre, M., Smith, A. J., Zhai, Y., Svärd, S. G., & Gillin, F. D. (2011) · Genome biology · doi:10.1186/gb-2011-12-7-r66 · Cited by 144
Regulation of Hsp90 client proteins by a Cullin5-RING E3 ubiquitin ligase
Ehrlich, E. S., Wang, T., Luo, K., Xiao, Z., Niewiadomska, A. M., Martinez, T. L., Xu, W., Neckers, L., & Yu, X.-F. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0810571106 · Cited by 138
Targeting the oncogene and kinome chaperone CDC37
Gray, P. J., Prince, T. L., Cheng, J., Stevenson, M. A., & Calderwood, S. K. (2008) · Nature reviews. Cancer · doi:10.1038/nrc2420 · Cited by 136
Yang, J., Campobasso, N., Biju, M. P., Fisher, K. E., Pan, X.-Q., Cottom, J., Galbraith, S., Ho, T. F., Zhang, H., Hong, X., et al. (2011) · Chemistry & Biology · doi:10.1016/j.chembiol.2010.12.013 · Cited by 113
Mandal, A. K., Lee, P. C., Chen, J. A., Nillegoda, N. B., Heller, A., DiStasio, S., Oen, H. O., Victor, J., Nair, D. M., Brodsky, J. L., et al. (2007) · The Journal of Cell Biology · doi:10.1083/jcb.200604106 · Cited by 105
A proteomic snapshot of the human heat shock protein 90 interactome
Falsone, S. F., Gesslbauer, B., Tirk, F., Piccinini, A. M., & Kungl, A. J. (2005) · FEBS Letters · doi:10.1016/j.febslet.2005.10.020 · Cited by 97
Allosteric Interactions between the Myristate- and ATP-Site of the Abl Kinase
Iacob, R. E., Zhang, J., Gray, N. S., & Engen, J. R. (2011) · PLoS ONE · doi:10.1371/journal.pone.0015929 · Cited by 74
Ghosh, A., Chawla‐Sarkar, M., & Stuehr, D. J. (2011) · The FASEB Journal · doi:10.1096/fj.10-180554 · Cited by 70
Ricketson, D., Hostick, U., Fang, L., Yamamoto, K. R., & Darimont, B. D. (2007) · Journal of Molecular Biology · doi:10.1016/j.jmb.2007.02.057 · Cited by 69
Oncogenic Mutations Reduce the Stability of Src Kinase
Falsone, S. F., Leptihn, S., Osterauer, A., Haslbeck, M., & Büchner, J. (2004) · Journal of Molecular Biology · doi:10.1016/j.jmb.2004.08.091 · Cited by 51
Mutational Activation of ErbB2 Reveals a New Protein Kinase Autoinhibition Mechanism
Fan, Y., Wong, L., Ding, J., Spiridonov, N. A., Johnson, R. C., & Johnson, G. R. (2007) · Journal of Biological Chemistry · doi:10.1074/jbc.m708116200 · Cited by 47
Bacterial Hsp90 - desperately seeking clients
Büchner, J. (2010) · Molecular Microbiology · doi:10.1111/j.1365-2958.2010.07140.x · Cited by 32
A proteomic approach towards the Hsp90‐dependent ubiquitinylated proteome
Falsone, S. F., Gesslbauer, B., Rek, A., & Kungl, A. J. (2007) · PROTEOMICS · doi:10.1002/pmic.200600996 · Cited by 31
Flagged first, then by citations
Research works printed but not linked: 3
- Fedorov, O., Marsden, B., Pogacic, V., Rellos, P., Müller, S., Bullock, A.N., Schwaller, J., Sundström, M., and Knapp, S. (2007). A systematic interaction map of validated kinase inhibitors with Ser/Thr kinases. Proc. Natl. Acad. Sci. USA 104, 20523–20528. · DOI
- Fodor, A.A., and Aldrich, R.W. (2004). Influence of conservation on calculations of amino acid covariance in multiple sequence alignments. Proteins 56, 211–221. · DOI
- Manning, G., Whyte, D.B., Martinez, R., Hunter, T., and Sudarsanam, S. (2002). The protein kinase complement of the human genome. Science 298, 1912–1934. · DOI · Paper page
Cited by
Sorted by citations
Schopf, F. H., Biebl, M. M., & Buchner, J. (2017) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm.2017.20 · Cited by 1,540
Induced protein degradation: an emerging drug discovery paradigm
Lai, A. C., & Crews, C. M. (2017) · Nature Reviews Drug Discovery · doi:10.1038/nrd.2016.211 · Cited by 1,486
In vivo aspects of protein folding and quality control
Balchin, D., Hayer-Hartl, M. K., & Hartl, F. U. (2016) · Science · doi:10.1126/science.aac4354 · Cited by 1,477
Lu, H., Zhou, Q., He, J., Jiang, Z., Peng, C., Tong, R., & Shi, J. (2020) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-020-00315-3 · Cited by 891
Heat shock proteins: Biological functions, pathological roles, and therapeutic opportunities
Hu, C., Yang, J. C., Qi, Z., Wu, H., Wang, B., Zou, F., Mei, H., Liu, J. L., Wang, W., & Liu, Q. (2022) · MedComm · doi:10.1002/mco2.161 · Cited by 881
Metadata
- Authors
- Taipale, M., Krykbaeva, I., Koeva, M., Kayatekin, C., Westover, K. D., Karras, G. I., & Lindquist, S.
- Affiliations
- Whitehead Institute for Biomedical Research (US)
- The University of Texas Southwestern Medical Center (US)
- Howard Hughes Medical Institute (US)
- Corresponding author
- Lindquist, Susan
- Venue
- Cell
- Publisher
- Elsevier BV
- Published
- 2012-08
- Volume
- 150
- Issue
- 5
- Pages
- 987-1001
- ISSN
- 0092-8674 (ISSN-L)
- PMC
- PMC3894786
- OpenAlex
- W2096237314
- Cited by
- 879
- References
- 47
- Citations by year
- 2026: 49 · 2025: 59 · 2024: 59 · 2023: 61 · 2022: 55 · 2021: 48 · 2020: 78 · 2019: 55 · 2018: 77 · 2017: 59 · 2016: 70 · 2015: 72 · 2014: 75 · 2013: 53 · 2012: 6
- FWCI
- 26.50
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Cell (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- DSpace@MIT (Massachusetts Institute of Technology) (submittedVersion, cc-by-nc)
- Elsevier eBooks
- Funders
- Howard Hughes Medical Institute
- National Human Genome Research Institute (RL1HG004671)
- National Cancer Institute (RL1CA133834)
- National Institute of General Medical Sciences (RL1GM084437)
- National Institute of Dental and Craniofacial Research (UL1DE019585)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Heat shock proteins research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ubiquitin and proteasome pathways
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Microtubule and mitosis dynamics
- Keywords
- HSP90, Hsp90 client proteins, Cdc37, molecular chaperones, substrate recognition, protein-protein interaction, kinases, transcription factors, E3 ubiquitin ligase, small molecule inhibitors, binding thermodynamics
- MeSH terms
- Amino Acid Sequence, Animals, Humans, Models, Molecular, Molecular Sequence Data, Protein Kinases, Receptors, Steroid, Thermodynamics, Transcription Factors, Sequence Alignment, Cell Cycle Proteins, Chaperonins, HSP90 Heat-Shock Proteins, Proteome, Protein Interaction Mapping, Ubiquitin-Protein Ligases, Luciferases, Renilla, Protein Interaction Domains and Motifs, Protein Stability
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review