A Structured Tumor-Immune Microenvironment in Triple Negative Breast Cancer Revealed by Multiplexed Ion Beam Imaging

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PD-1 and PD-L1 Immune Checkpoint Blockade to Treat Breast Cancer

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PD-1 blockade induces responses by inhibiting adaptive immune resistance

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Rapid Setup of Tissue Microarray and Tiled Area Imaging on the Multiplexed Ion Beam Imaging Microscope using the Tile/SED/Array Interface

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Breaks for Precision Medicine in Cancer: Development and Prospects of Spatiotemporal Transcriptomics

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Data modeling the interplay between single-cell shape, single-cell protein expression, and tissue state

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Machine learning and pathology: a historical perspective

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Liver cancer recurrence predicted by immune-cell location and gene expression

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AI-Assisted Immunology for Precision Cancer Medicine

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Expanding the Comprehension of the Tumor Microenvironment using Mass Spectrometry Imaging of Formalin-Fixed and Paraffin-Embedded Tissue Samples

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Artificial intelligence in breast cancer: An opportunity for early diagnosis

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Single-cell landscape of bone marrow metastases in human neuroblastoma unraveled by deep multiplex imagingPreprint

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IBEX: An open and extensible method for high content multiplex imaging of diverse tissuesPreprint

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The evolution of genomic, transcriptomic, and single-cell protein markers of metastatic upper tract urothelial carcinomaPreprint

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SOTIP: a Unified Framework for Microenvironment Modelling with Spatial Omics DataPreprint

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On clustering for cell phenotyping in multiplex immunohistochemistry (mIHC) and multiplexed ion beam imaging (MIBI) DataPreprint

Seal, S., Wrobel, J., Johnson, A. M., Nemenoff, R. A., Schenk, E. L., Bitler, B. G., Jordan, K. R., & Ghosh, D. (2022) · Research Square · doi:10.21203/rs.3.rs-609920/v2 · Cited by 1

Interpretable spatial cell learning enhances the characterization of patient tissue microenvironments with highly multiplexed imaging dataPreprint

Lu, P., Oetjen, K. A., Oh, S. T., & Thorek, D. L. J. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.03.26.534306 · Cited by 1

Characterization of the Immune Landscapes of Malignant Pleural Effusions and Their Corresponding Primary Tumors from Patients with Breast Carcinoma or Lung AdenocarcinomaPreprint

Laberiano-Fernández, C., Gan, Q., Wang, S. M., Tamegnon, A., Wistuba, I. I., Yoon, E. C., Roy‐Chowdhuri, S., & Parra, E. R. (2023) · Preprints.org · doi:10.20944/preprints202306.0480.v1 · Cited by 1

Pembrolizumab alters the tumor immune landscape in a patient with dMMR glioblastomaPreprint

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Dual activity of Minnelide chemosensitize basal/triple negative breast cancer stem cells and reprograms immunosuppressive tumor microenvironmentPreprint

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Macrophages expressing chimeric cytokine receptors have an inflammatory phenotype and anti-tumoral activity upon IL-10 or TGFβ stimulationPreprint

Traxel, S., Schmidt, F., Beerli, C., Vuong, D.-V., Speck, R. F., & Bredl, S. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.10.01.615826 · Cited by 1

Mapping intratumoral myeloid-T cell interactomes at single-cell resolution reveals targets for overcoming checkpoint inhibitor resistancePreprint

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Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomicsPreprint

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Context-dependent spatial multicellular network motifs for single-cell spatial biologyPreprint

Zamir, A., Amitay, Y., Tamir, Y., Keren, L., & Zaritsky, A. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.05.05.651422 · Cited by 1

Lineage-Specific Immune Remodeling Following Autologous Hematopoietic Stem Cell Transplantation in Relapsing–Remitting Multiple SclerosisPreprint

Gavasso, S., Haugsøen, J. B., Kleftogiannis, D., Gerking, Y., Anandan, S., Herdlevær, I., Olsen, H., Brun, M., Blaser, N., Gjertsen, B. T., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.07.01.662494 · Cited by 1

Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomicsPreprint

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Multi-omic profiling of human antibody-secreting cells reveals diverse subsets sustain durable humoral immunityPreprint

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Hacking the ‘Cellular Immunology Agency’: T cells caught in the act

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Clinico-pathological relationship between androgen receptor (AR) and tumor infiltrating lymphocytes (TILs) in triple negative breast cancer (TNBC)Preprint

Helal, T., Bakkach, J., Elghazawy, H. I., Aref, A., Kelany, M., Abdallah, L., Abdelbakey, F., Ali, D., Ali, D., Ahmed, M. H., et al. (2021) · Research Square · doi:10.21203/rs.3.rs-139711/v1

CNS myeloid cell heterogeneity at the single-cell level

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Imaging Glial Cells in Alzheimer’s Disease: From Light Microscopy to Multiplexed Ion Beam Imaging

Morris-Janzen, D., & Oliveria, J. P. (2019) · Health Science Inquiry · doi:10.29173/hsi12

FOXes at play in the lymphoma landscape

Younes, S. F., & Natkunam, Y. (2020) · Leukemia & lymphoma/Leukemia and lymphoma · doi:10.1080/10428194.2020.1834099

Quantitative engineering biology in the tumormicroenvironment

Ma, W., Wei, T., Fu, X., & Li, X. (2020) · Chinese Science Bulletin (Chinese Version) · doi:10.1360/tb-2020-0489

Measuring the Stability of Learned FeaturesPreprint

Sankaran, K. (2021) · arXiv (Cornell University) · doi:10.48550/arxiv.2102.10388

Proteomic biomarker technology for cancer immunotherapy

Fankhauser, R. G., DePatie, N., Berryman, R., Lucero, O. M., & Kulkarni, R. P. (2021) · Elsevier eBooks · doi:10.1016/b978-0-323-90949-5.00007-3

Spatial mapping of the tumor immune microenvironment

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Tumor-Immune Partitioning and Clustering (TIPC): an algorithm for identifying tumor-immune cell spatial interaction signatures within the tumor microenvironmentPreprint

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Analysis and Prognosis of Tumor Immune Infiltrates and Immune Microenvironment of m6A-Related LncRNAs in Patients with Gastric CancerPreprint

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Advances in Single-Cell Sequencing Technology and its Applications in Triple-Negative Breast CancerPreprint

Li, M., Wang, M., Xie, Y., Yan, T., & Li, Y. (2021) · Research Square · doi:10.21203/rs.3.rs-1034157/v1

Metodología para la censura de cuentas y de gestión para el crédito bancario.

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Spatial MIST Technology for Rapid, Highly Multiplexed Detection of Protein Distribution on Brain TissuePreprint

Reddy, R., Yang, L., Liu, J. J., Liu, Z., & Wang, J. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.01.11.475923

Revealing the Evolution of the Tumor Immune Microenvironment in Follicular Lymphoma Patients Progressing Within 24 Months Using Single-cell Imaging Mass CytometryPreprint

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The Expression of PD-L1, CD47, CD4, and CD8 in Breast Cancer before and after Neoadjuvant Chemotherapy and Their Relationship with Clinicopathological Features and PrognosisPreprint

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Faculty Opinions recommendation of High-resolution mapping of fluoroquinolones in TB rabbit lesions reveals specific distribution in immune cell types.

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The Influence of Tissue Architecture on Drug Response: Anticancer Drug Development in High-Dimensional Combinatorial Microenvironment Platforms

Jokela, T. A., Carlson, E. G., & LaBarge, M. A. (2022) · Springer eBooks · doi:10.1007/978-3-030-98950-7_25

An in situ Quantitative Map of Initial Human Colorectal HIV TransmissionPreprint

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Nanobiotherapeutic strategies to target immune microenvironment of triple-negative breast cancer.

Chang, Q., Chang, L., Li, M., Fan, L., Bao, S., Wang, X., & Liu, L. (2022) · PubMed Central

Spatial Transcriptomics in Inflammation: Dissecting the Immune Response in 3D in Complex Tissues

Hu, K. H. (2023) · Progress in inflammation research · doi:10.1007/978-3-031-23661-7_8

Bootstrap Confidence Regions for Learned Feature Embeddings

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Data from The Spatial Landscape of Progression and Immunoediting in Primary Melanoma at Single-Cell Resolution

Nirmal, A. J., Maliga, Z., Vallius, T., Quattrochi, B., Chen, A. A., Jacobson, C. A., Pelletier, R. J., Yapp, C., Arias-Camison, R., Chen, Y., et al. (2023) · doi:10.1158/2159-8290.c.6549601

Supplementary Table from The Spatial Landscape of Progression and Immunoediting in Primary Melanoma at Single-Cell Resolution

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Spatial Technologies: A Game Changer for Studying the Tumor Microenvironment

Lee, R. Y., Lau, M. C., Goh, D. L. M., Wee, F. Y. T., Lim, J. C. T., & YEONG, J. P. S. (2023) · Springer eBooks · doi:10.1007/978-3-030-80962-1_96-1 · Cited by 1

Data from Spatial Positioning of Immune Hotspots Reflects the Interplay between B and T Cells in Lung Squamous Cell Carcinoma

Zhang, H., AbdulJabbar, K., Moore, D. A., Akarca, A. U., Enfield, K. S. S., Jamal‐Hanjani, M., Raza, S. E. A., Veeriah, S., Salgado, R., McGranahan, N., et al. (2023) · doi:10.1158/0008-5472.c.6626121.v1

Spatial Technologies: A Game Changer for Studying the Tumor Microenvironment

Lee, R. Y., Lau, M. C., Goh, D. L. M., Wee, F. Y. T., Lim, J. C. T., & YEONG, J. P. S. (2023) · Springer eBooks · doi:10.1007/978-3-030-80962-1_96-2

Single Cell Spatial Analysis and Biomarker Discovery in Hodgkin LymphomaPreprint

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Cancer patient stratification based on patterns of immune infiltration

Schaafsma, E., Zhang, B., Zhao, Y., & Cheng, C. (2023) · Elsevier eBooks · doi:10.1016/b978-0-12-824010-6.00027-7

Estudo dos perfis mutacional e imunocelular como biomarcadores preditivos e prognósticos emergentes em pacientes com câncer de pulmão

Yaegashi, L. B. (2023) · Digital Library of Theses and Dissertations (Universidade de São Paulo) · doi:10.11606/t.5.2023.tde-10052023-112429

Hypoxia coordinates the spatial landscape of myeloid cells within glioblastoma to affect outcomePreprint

Haley, M., Bere, L. D., Minshull, J., Georgaka, S., Garcia-Martin, N., Howell, G. J., Coope, D. J., Roncaroli, F., King, A. T., Wedge, D. C., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.06.30.547190

Visualizing and Subtyping Tumor Ecosystem

Saw, P. E., & Song, E. (2023) · Springer eBooks · doi:10.1007/978-981-99-1183-7_27

ATP5b and Bioenergetic Plasticity in Breast Cancer Metastasis and Tumour Microenvironment Interactions

Lewthwaite, D. (2023) · doi:10.26686/wgtn.23787291

Multiplex imaging of localized prostate tumors reveals changes in mast cell type composition and spatial organization of AR-positive cells in the tumor microenvironmentPreprint

Ak, Ç., Sayar, Z., Thibault, G., Burlingame, E. A., Eng, J. R., Chitsazan, A., Adey, A., Boniface, C. T., Spellman, P. T., THOMAS, G. V., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.08.18.553854

Impact of Water Scarcity on Rice Production caused Scio-Economic Deprivation in Taluka Kamber, Pakistan

Chandio, N. N. (2023) · Journal of Development and Social Sciences · doi:10.47205/jdss.2023(4-ii)71

Neue Methoden der multiparametrischen Gewebediagnostik

Mayer, A., & Haist, M. (2023) · Die Onkologie · doi:10.1007/s00761-023-01425-7

Data from Comprehensive Single-Cell Immune Profiling Defines the Patient Multiple Myeloma Microenvironment Following Oncolytic Virus Therapy in a Phase Ib Trial

Nawrocki, S. T., Olea, J., Celi, C. V., Dadrastoussi, H., Wu, K., Tsao-Wei, D. D., Colombo, A., Coffey, M. C., Hernandez, E. F., Chen, X., et al. (2023) · doi:10.1158/1078-0432.c.6982800

Analytical Tools to Quantitate Immune Mediated Effects

Pavelko, K. D., & Villasboas, J. C. (2024) · Wiley eBooks · doi:10.1002/9781119824572.ch26

Pixel-level analysis of protein markers in highly multiplexed immunofluorescence images of kidney biopsies

Durkee, M. S., Ai, J., Casella, G., Cao, T., Andrade, M. S., Clark, M. R., & Giger, M. L. (2024) · SPIE Medical Imaging: Digital and Computational Pathology · doi:10.1117/12.3008522

Additional file 3 of PPP2R2B downregulation is associated with immune evasion and predicts poor clinical outcomes in triple-negative breast cancer

Li, Z., Li, Y., Wang, X., & Yang, Q. (2021) · Figshare · doi:10.6084/m9.figshare.13532704

Additional file 7 of PPP2R2B downregulation is associated with immune evasion and predicts poor clinical outcomes in triple-negative breast cancer

Li, Z., Li, Y., Wang, X., & Yang, Q. (2021) · Figshare · doi:10.6084/m9.figshare.13532716

Additional file 2 of PPP2R2B downregulation is associated with immune evasion and predicts poor clinical outcomes in triple-negative breast cancer

Li, Z., Li, Y., Wang, X., & Yang, Q. (2021) · Figshare · doi:10.6084/m9.figshare.13532701

Additional file 1 of PPP2R2B downregulation is associated with immune evasion and predicts poor clinical outcomes in triple-negative breast cancer

Li, Z., Li, Y., Wang, X., & Yang, Q. (2021) · Figshare · doi:10.6084/m9.figshare.13532698

Additional file 9 of PPP2R2B downregulation is associated with immune evasion and predicts poor clinical outcomes in triple-negative breast cancer

Li, Z., Li, Y., Wang, X., & Yang, Q. (2021) · Figshare · doi:10.6084/m9.figshare.13532722

Additional file 6 of Spatial heterogeneity of tumor microenvironment influences the prognosis of clear cell renal cell carcinoma

Zhang, D., Ni, Y., Wang, Y., Feng, J., Zhuang, N., Li, J., Liu, L., Shen, W., Ji, Z., Zheng, W., et al. (2023) · Figshare · doi:10.6084/m9.figshare.23722305

Quantitative analysis of high-plex immunofluorescence microscopy images to investigate the breast cancer tumor microenvironment

Torcasso, M. S., Howard, F. M., Zha, Y., Ai, J., Clark, M. R., & Giger, M. L. (2024) · International Workshop on Breast Imaging (IWBI) · doi:10.1117/12.3027025

Spatial quantification of cellular metabolism in tissues by metabolic regulome profiling

Glauner, T. A., Truxa, S., Cetin, M., Schlüter, K., Calafato, D., & Hartmann, F. J. (2024) · Elsevier eBooks · doi:10.1016/b978-0-12-822213-3.00006-1

Novel single-cell technologies advance our mechanistic understanding of muscle stem cell function in skeletal muscle regeneration

Porpiglia, E., & Blau, H. M. (2024) · Elsevier eBooks · doi:10.1016/b978-0-12-822213-3.00003-6

Single-cell spatial phenotype mapping of tissue microenvironments with multiplexed ion beam imaging (MIBI)

Munch, Y., Abel, E., Hav, M., Padmanabhan, R., Pawlowski, S. W., Gubbens, A. J., Bendall, S. C., Kimmey, S. C., & Tarolli, J. G. (2024) · Elsevier eBooks · doi:10.1016/b978-0-12-822209-6.00007-2

Combined nucleic acid and protein quantification in the native tissue microenvironment

Zhu, B., Markovic, M., & Jiang, S. (2024) · Elsevier eBooks · doi:10.1016/b978-0-12-822209-6.00006-0

Identifying Differential Spatial Expression Patterns across Different Slices, Conditions and Developmental Stages with Interpretable Deep LearningPreprint

Cui, Y., & Yuan, Z. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.08.04.606512

Interactions between neutrophils and macrophages harboring gram-negative bacteria promote obesity-associated breast cancerPreprint

Takle, S. T., Grøndal, S. M., Lien, M. E., Lianto, P., Deng, W., Lillestøl, R., Lønning, P. E., Lorens, J. B., Knappskog, S., & Halberg, N. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.08.08.607253

CLEAR-IT: Contrastive Learning to Capture the Immune Composition of Tumor MicroenvironmentsPreprint

Spengler, D., Korovin, S., Prakash, K., Bankhead, P., Debets, R., Smith, C., & Balcioglu, H. E. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.08.20.608738

Powerful microscopy technologies decode spatially organized cellular networks that drive response to immunotherapy in humans

Chen, J. H., Elmelech, L., Tang, A. L., & Hacohen, N. (2024) · Current Opinion in Immunology · doi:10.1016/j.coi.2024.102463

BoReMi: Bokeh-based jupyter-interface for registering spatio-molecular data to related microscopy images

Ishar, J., Tam, Y. M., Mages, S., & Klughammer, J. (2024) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1012504

A Multimodal Study of the Response to Neoadjuvant Chemotherapy in Patients with Breast CancerPreprint

Peng, J., Chen, R., Liang, Y., Wang, Y., Lyu, S., Song, J., Ye, Z., Liu, W., & Liu, Z. (2024) · SSRN Electronic Journal · doi:10.2139/ssrn.4997928

IFNγ-Expressing Myeloid Cells Localize within Lipoproteinosis during Drug-Associated Pulmonary Alveolar Proteinosis occurring in Systemic Juvenile Idiopathic ArthritisPreprint

Delmastro, A. C., Liu, C. C., Ding, X., Tan, S. Y., Averbukh, I., Bosse, M. M., Keyes, T., Sharma, S., Deutsch, G. H., Angelo, M., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.11.22.624756

Pseudo-spectral angle mapping for pixel and cell classification in highly multiplexed immunofluorescence images

Torcasso, M. S., Ai, J., Casella, G., Cao, T., Chang, A., Halper-Stromberg, A., Jabrì, B., Clark, M. R., & Giger, M. L. (2024) · Journal of medical imaging · doi:10.1117/1.jmi.11.6.067502

Biomechanical regulation of anti-tumor immune responses in the TME

Kersten, K., & Weaver, V. M. (2024) · Elsevier eBooks · doi:10.1016/b978-0-443-14064-8.00031-x

Improve accuracy of cell segmentation based on a cascaded network for edge enhancement

Gong, S., Karl, Z., Yu, Z., & Shen, M. (2025) · Advanced Fiber Laser Conference (AFL) · doi:10.1117/12.3058681

HRCHY-CytoCommunity identifies hierarchical tissue organization in cell-type spatial mapsPreprint

Wang, Z., Xu, Y., Hu, Y., & Gao, L. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.03.27.645631

Analysis of the tumor microenvironment using imaging mass cytometry data

Loncová, Z., Trajanoski, Z., & Rieder, D. (2025) · Methods in cell biology · doi:10.1016/bs.mcb.2025.03.006

Multi-cellular phenotypic dynamics during the progression of breast tumorsPreprint

Gsell, L., Watson, S. S., Sutevski, I., Massara, M., Soukup, K., Eroğlu, A., Mold, J. E., Cougnoux, A., Joyce, J. A., & Hausser, J. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.04.16.649085

Cells Keep Diverse Company in Diseased Tissues

Campbell, K. R., & Goeva, A. (2025) · Cancer Research · doi:10.1158/0008-5472.can-25-2070

Some recent developments in functional covariates on time-to-event data: a review

Li, Y., & Zhao, X. (2025) · Communications in Statistics - Simulation and Computation · doi:10.1080/03610918.2025.2501084

SpatioMark: quantifying the impact of spatial proximity on cell phenotype

Iyengar, S. S., Qin, A. R., Robertson, N. B., Harman, A. N., & Patrick, E. (2025) · Bioinformatics · doi:10.1093/bioinformatics/btaf409 · Cited by 1

Unraveling the UCHL5-ALK5 Axis: A Novel Therapeutic Strategy for Triple-Negative Breast CancerPreprint

Wang, X., Wang, N., Dou, D., Guo, G., Duan, X., Xue, B., Xiong, Y., Chi, J., Sun, Y., Han, L., et al. (2025) · SSRN Electronic Journal · doi:10.2139/ssrn.5392840

OSDR2.0 infers microenvironment-driven cell-state transitions and population dynamics from a single spatial biopsyPreprint

Shalom, I., Somer, J., Miyara, S., Mayo, A., Mannor, S., & Alon, U. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.09.02.673328

Spatial Technologies: A Game Changer for Studying the Tumor Microenvironment

Lee, R. Y., Lau, M. C., Goh, D. L. M., Wee, F. Y. T., Lim, J. C. T., & YEONG, J. P. S. (2025) · Springer eBooks · doi:10.1007/978-3-032-00761-2_96

Therapeutic remodeling of the tuberculosis granuloma with 1-methyl-D-tryptophan enhances CD8 + T cell–macrophage interactions

McCaffrey, E., Delmastro, A. C., Singh, B., Devi, A., Munson, C. W., Priyanka, Golden, N., Khader, S. A., Angelo, M., Kaushal, D., et al. (2026) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2528104123

Comprehensive characterization of early-stage Non-Small Cell Lung cancers with multi-modal data integrationPreprint

Schulz, D., Morfouace, M., Fernandez, B. P., Możejko, M., Déglise, S., Daniel, M., Eling, N., Hong, H. S., Tissot, S., Rusakiewicz, S., et al. (2025) · medRxiv · doi:10.1101/2025.11.10.25339890 · Cited by 1

Tissue Microarray-Based Digital Spatial Profiling of Benign Breast Lobules and Breast Cancers: Feasibility, Biological Coherence, and Cross-Platform Benchmarks

Sherman, M. E., Carter, J. C., Vierkant, R. A., Stallings‐Mann, M. L., Pacheco-Spann, L. M., Winham, S. J., Vachon, C. M., Wang, C., Jensen, M. R., Troester, M. A., et al. (2025) · Cancers · doi:10.3390/cancers17233797

Trojan horse natural killer cells enhance targeted drug delivery and boost memory T cell-mediated immune responses in triple-negative breast cancer

Wu, L., Yao, H., Wang, Y., Liu, H., Lv, H., Jiao, D., & Jiang, J. (2025) · Acta Biomaterialia · doi:10.1016/j.actbio.2025.12.009 · Cited by 1

ClustSIGNAL identifies cell types and subtypes using an adaptive smoothing approach for scalable spatial omics clusteringPreprint

Panwar, P., Guo, B., Zhou, H., Hicks, S. C., & Ghazanfar, S. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2025.11.30.691081 · Cited by 1

Genetically engineered nanovesicles based anti-EphA2/CD3 bispecific antibody promotes T cell immune response for triple negative breast cancer treatment

Wang, S., Zhang, M., Lin, L., Dong, J., Wang, X., Liu, X., Zhang, S., Liu, G., & Kang, X. (2025) · Chemical Engineering Journal · doi:10.1016/j.cej.2025.171773

Additional file 6 of Integrated analysis of immune-related genes in endometrial carcinoma

Wang, Y., Liu, Y., Guan, Y., Li, H., Liu, Y., Zhang, M., Cui, P., Kong, D., Chen, X., & Yin, H. (2020) · Figshare · doi:10.6084/m9.figshare.13047204

Multiplexed imaging analysis of the tumor-immune microenvironment reveals predictors of outcome in triple-negative breast cancer

Patwa, A., Yamashita, R., Long, J., Risom, T., Angelo, M., Keren, L., & Rubin, D. L. (2021) · Communications Biology · doi:10.1038/s42003-021-02361-1 · Cited by 49

Abstract 1535: Differential immune microenvironments in triple-negative breast cancer and hormone receptor-positive HER2-negative breast cancer: A spatial analysis via multiplex immunofluorescence

Cha, Y. J., Park, I. H., & Shin, S. (2024) · Cancer Research · doi:10.1158/1538-7445.am2024-1535

Spatial and Compositional Biomarkers in Tumor Microenvironment Predicts Clinical Outcomes in Triple-Negative Breast CancerPreprint

Mi, H., Varadhan, R., Cimino‐Mathews, A., Emens, L. A., Santa-Maria, C. A., & Popel, A. S. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.12.18.572234 · Cited by 10

A multiplexed view of immune infiltration

Seton-Rogers, S. E. (2018) · Nature reviews. Cancer · doi:10.1038/s41568-018-0063-y · Cited by 4

Multiplexed ion beam imaging (MIBI) for characterization of the tumor microenvironment across tumor types

Ptacek, J., Locke, D., Finck, R., Cvijic, M. E., Li, Z., Tarolli, J. G., Aksoy, M., Sigal, Y. M., Zhang, Y., Newgren, M., et al. (2020) · Laboratory Investigation · doi:10.1038/s41374-020-0417-4 · Cited by 112