Cited by 42Neuroscience and Neuropharmacology ResearchGenetics and Neurodevelopmental DisordersAmino Acid Enzymes and Metabolism

The Developmental Shift of NMDA Receptor Composition Proceeds Independently of GluN2 Subunit-Specific GluN2 C-Terminal Sequences

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McKay, Sean, Ryan, Tomás J., McQueen, Jamie, Indersmitten, Tim, Marwick, Katie F.M., Hasel, Philip, Kopanitsa, Maksym V., Baxter, Paul S. +7 more·2018·Cell Reports

Abstract

The GluN2 subtype (2A versus 2B) determines biophysical properties and signaling of forebrain NMDA receptors (NMDARs). During development, GluN2A becomes incorporated into previously GluN2B-dominated NMDARs. This "switch" is proposed to be driven by distinct features of GluN2 cytoplasmic C-terminal domains (CTDs), including a unique CaMKII interaction site in GluN2B that drives removal from the synapse. However, these models remain untested in the context of endogenous NMDARs. We show that, although mutating the endogenous GluN2B CaMKII site has secondary effects on GluN2B CTD phosphorylation, the developmental changes in NMDAR composition occur normally and measures of plasticity and synaptogenesis are unaffected. Moreover, the switch proceeds normally in mice that have the GluN2A CTD replaced by that of GluN2B and commences without an observable decline in GluN2B levels but is impaired by GluN2A haploinsufficiency. Thus, GluN2A expression levels, and not GluN2 subtype-specific CTD-driven events, are the overriding factor in the developmental switch in NMDAR composition.

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Crossref · 10.1016/j.celrep.2018.09.089

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  • Mutations in the GluN2B CTD that cannot bind CaMKII, or competing constructs, produce highly variable effects on LTP, ranging from complete block to no block.

    “The second approach utilizes mutations in the CTD of GluN2B that cannot bind CaMKII as replacement for the wt (CaMKII L1298A/R1300Q) (120, 121, 230) or either competing with overexpressed full-length constructs (GluN2B R1300S/Q1303D) (231) or competing by expressing just the wt GluN2B CTD (839–1482) (232). The results are highly variable as reviewed in Ref. 233, ranging from complete block of LTP”

    From Synaptic memory and CaMKII (2023) · cites this paper as [230]

    The Results report that the paper’s GluN2B CaMKII-binding-site mutant showed no significant difference in theta-burst LTP from wild type. But its knockin is L1298A/R1300N/S1303D, not the L1298A/R1300Q variant named alongside this citation. The broader range from complete block to no block is attributed in the citing sentence to a separate review, not to this paper. (LLM, conf=0.87)

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Research works printed but not linked: 55

  1. Altafaj X. Ortiz-Abalia J. Fernández M. Potier M.C. Laffaire J. Andreu N. Dierssen M. González-García C. Ceña V. Martí E. Fillat C. Increased NR2A expression and prolonged decay of NMDA-induced calcium transient in cerebellum of TgDyrk1A mice, a mouse model of Down syndrome Neurobiol. Dis. 32 2008 377 384 18773961
  2. Barria A. Malinow R. NMDA receptor subunit composition controls synaptic plasticity by regulating binding to CaMKII Neuron 48 2005 289 301 16242409
  3. Baxter P.S. Hardingham G.E. Adaptive regulation of the brain’s antioxidant defences by neurons and astrocytes Free Radic. Biol. Med. 100 2016 147 152 27365123 PMC5145800
  4. Baxter P.S. Martel M.A. McMahon A. Kind P.C. Hardingham G.E. Pituitary adenylate cyclase-activating peptide induces long-lasting neuroprotection through the induction of activity-dependent signaling via the cyclic AMP response element-binding protein-regulated transcription co-activator 1 J. Neurochem. 118 2011 365 378 21623792 PMC3557719
  5. Bell K.F. Hardingham G.E. The influence of synaptic activity on neuronal health Curr. Opin. Neurobiol. 21 2011 299 305 21292474 PMC3160470
  6. Bell K.F. Al-Mubarak B. Martel M.A. McKay S. Wheelan N. Hasel P. Márkus N.M. Baxter P. Deighton R.F. Serio A. Neuronal development is promoted by weakened intrinsic antioxidant defences due to epigenetic repression of Nrf2 Nat. Commun. 6 2015 7066 25967870 PMC4441249
  7. Burnashev N. Szepetowski P. NMDA receptor subunit mutations in neurodevelopmental disorders Curr. Opin. Pharmacol. 20 2015 73 82 25498981
  8. Chandler L.J. Sutton G. Dorairaj N.R. Norwood D. N-methyl D-aspartate receptor-mediated bidirectional control of extracellular signal-regulated kinase activity in cortical neuronal cultures J. Biol. Chem. 276 2001 2627 2636 11062237
  9. Chung H.J. Huang Y.H. Lau L.F. Huganir R.L. Regulation of the NMDA receptor complex and trafficking by activity-dependent phosphorylation of the NR2B subunit PDZ ligand J. Neurosci. 24 2004 10248 10259 15537897 PMC6730169
  10. Cooke S.F. Bear M.F. How the mechanisms of long-term synaptic potentiation and depression serve experience-dependent plasticity in primary visual cortex Philos. Trans. R. Soc. Lond. B Biol. Sci. 369 2013 20130284 24298166 PMC3843896
  11. Delint-Ramirez I. Fernández E. Bayés A. Kicsi E. Komiyama N.H. Grant S.G. In vivo composition of NMDA receptor signaling complexes differs between membrane subdomains and is modulated by PSD-95 and PSD-93 J. Neurosci. 30 2010 8162 8170 20554866 PMC2912510
  12. Edman S. McKay S. Macdonald L.J. Samadi M. Livesey M.R. Hardingham G.E. Wyllie D.J. TCN 201 selectively blocks GluN2A-containing NMDARs in a GluN1 co-agonist dependent but non-competitive manner Neuropharmacology 63 2012 441 449 22579927 PMC3384000
  13. El Gaamouch F. Buisson A. Moustié O. Lemieux M. Labrecque S. Bontempi B. De Koninck P. Nicole O. Interaction between αCaMKII and GluN2B controls ERK-dependent plasticity J. Neurosci. 32 2012 10767 10779 22855824 PMC6621385
  14. Frank R.A. Komiyama N.H. Ryan T.J. Zhu F. O’Dell T.J. Grant S.G. NMDA receptors are selectively partitioned into complexes and supercomplexes during synapse maturation Nat. Commun. 7 2016 11264 27117477 PMC5227094
  15. Gambrill A.C. Barria A. NMDA receptor subunit composition controls synaptogenesis and synapse stabilization Proc. Natl. Acad. Sci. USA 108 2011 5855 5860 21427228 PMC3078406
  16. Grau C. Arató K. Fernández-Fernández J.M. Valderrama A. Sindreu C. Fillat C. Ferrer I. de la Luna S. Altafaj X. DYRK1A-mediated phosphorylation of GluN2A at Ser(1048) regulates the surface expression and channel activity of GluN1/GluN2A receptors Front. Cell. Neurosci. 8 2014 331 25368549 PMC4201086
  17. Halt A.R. Dallapiazza R.F. Zhou Y. Stein I.S. Qian H. Juntti S. Wojcik S. Brose N. Silva A.J. Hell J.W. CaMKII binding to GluN2B is critical during memory consolidation EMBO J. 31 2012 1203 1216 22234183 PMC3297991
  18. Hardingham G.E. Do K.Q. Linking early-life NMDAR hypofunction and oxidative stress in schizophrenia pathogenesis Nat. Rev. Neurosci. 17 2016 125 134 26763624
  19. Hardingham N.R. Hardingham G.E. Fox K.D. Jack J.J. Presynaptic efficacy directs normalization of synaptic strength in layer 2/3 rat neocortex after paired activity J. Neurophysiol. 97 2007 2965 2975 17267749
  20. Hasel P. Dando O. Jiwaji Z. Baxter P. Todd A.C. Heron S. Márkus N.M. McQueen J. Hampton D.W. Torvell M. Neurons and neuronal activity control gene expression in astrocytes to regulate their development and metabolism Nat. Commun. 8 2017 15132 28462931 PMC5418577
  21. Hooper M. Hardy K. Handyside A. Hunter S. Monk M. HPRT-deficient (Lesch-Nyhan) mouse embryos derived from germline colonization by cultured cells Nature 326 1987 292 295 3821905
  22. Incontro S. Díaz-Alonso J. Iafrati J. Vieira M. Asensio C.S. Sohal V.S. Roche K.W. Bender K.J. Nicoll R.A. The CaMKII/NMDA receptor complex controls hippocampal synaptic transmission by kinase-dependent and independent mechanisms Nat. Commun. 9 2018 2069 29802289 PMC5970233
  23. Ito I. Hidaka H. Sugiyama H. Effects of KN-62, a specific inhibitor of calcium/calmodulin-dependent protein kinase II, on long-term potentiation in the rat hippocampus Neurosci. Lett. 121 1991 119 121 1850502
  24. Kopanitsa M.V. Afinowi N.O. Grant S.G. Recording long-term potentiation of synaptic transmission by three-dimensional multi-electrode arrays BMC Neurosci. 7 2006 61 16942609 PMC1574331
  25. Lavezzari G. McCallum J. Lee R. Roche K.W. Differential binding of the AP-2 adaptor complex and PSD-95 to the C-terminus of the NMDA receptor subunit NR2B regulates surface expression Neuropharmacology 45 2003 729 737 14529712
  26. Leonard A.S. Bayer K.U. Merrill M.A. Lim I.A. Shea M.A. Schulman H. Hell J.W. Regulation of calcium/calmodulin-dependent protein kinase II docking to N-methyl-D-aspartate receptors by calcium/calmodulin and alpha-actinin J. Biol. Chem. 277 2002 48441 48448 12379661
  27. Liu X.B. Murray K.D. Jones E.G. Switching of NMDA receptor 2A and 2B subunits at thalamic and cortical synapses during early postnatal development J. Neurosci. 24 2004 8885 8895 15470155 PMC6729956
  28. Lowenthal M.S. Markey S.P. Dosemeci A. Quantitative mass spectrometry measurements reveal stoichiometry of principal postsynaptic density proteins J. Proteome Res. 14 2015 2528 2538 25874902 PMC5597335
  29. Lussier M.P. Sanz-Clemente A. Roche K.W. Dynamic regulation of N-methyl-d-aspartate (NMDA) and α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptors by posttranslational modifications J. Biol. Chem. 290 2015 28596 28603 26453298 PMC4661374
  30. Martel M.A. Ryan T.J. Bell K.F. Fowler J.H. McMahon A. Al-Mubarak B. Komiyama N.H. Horsburgh K. Kind P.C. Grant S.G. The subtype of GluN2 C-terminal domain determines the response to excitotoxic insults Neuron 74 2012 543 556 22578505 PMC3398391
  31. McKay S. Griffiths N.H. Butters P.A. Thubron E.B. Hardingham G.E. Wyllie D.J. Direct pharmacological monitoring of the developmental switch in NMDA receptor subunit composition using TCN 213, a GluN2A-selective, glycine-dependent antagonist Br. J. Pharmacol. 166 2012 924 937 22022974 PMC3417419
  32. McQueen J. Ryan T.J. McKay S. Marwick K. Baxter P. Carpanini S.M. Wishart T.M. Gillingwater T.H. Manson J.C. Wyllie D.J.A. Pro-death NMDA receptor signaling is promoted by the GluN2B C-terminus independently of Dapk1 eLife 6 2017 e17161 28731405 PMC5544426
  33. Mony L. Zhu S. Carvalho S. Paoletti P. Molecular basis of positive allosteric modulation of GluN2B NMDA receptors by polyamines EMBO J. 30 2011 3134 3146 21685875 PMC3160180
  34. Nakazawa T. Komai S. Tezuka T. Hisatsune C. Umemori H. Semba K. Mishina M. Manabe T. Yamamoto T. Characterization of Fyn-mediated tyrosine phosphorylation sites on GluR epsilon 2 (NR2B) subunit of the N-methyl-D-aspartate receptor J. Biol. Chem. 276 2001 693 699 11024032
  35. Pagano M.A. Bain J. Kazimierczuk Z. Sarno S. Ruzzene M. Di Maira G. Elliott M. Orzeszko A. Cozza G. Meggio F. Pinna L.A. The selectivity of inhibitors of protein kinase CK2: an update Biochem. J. 415 2008 353 365 18588507
  36. Paoletti P. Bellone C. Zhou Q. NMDA receptor subunit diversity: impact on receptor properties, synaptic plasticity and disease Nat. Rev. Neurosci. 14 2013 383 400 23686171
  37. Philpot B.D. Espinosa J.S. Bear M.F. Evidence for altered NMDA receptor function as a basis for metaplasticity in visual cortex J. Neurosci. 23 2003 5583 5588 12843259 PMC6741231
  38. Prybylowski K. Chang K. Sans N. Kan L. Vicini S. Wenthold R.J. The synaptic localization of NR2B-containing NMDA receptors is controlled by interactions with PDZ proteins and AP-2 Neuron 47 2005 845 857 16157279 PMC1350965
  39. Puddifoot C. Martel M.A. Soriano F.X. Camacho A. Vidal-Puig A. Wyllie D.J. Hardingham G.E. PGC-1α negatively regulates extrasynaptic NMDAR activity and excitotoxicity J. Neurosci. 32 2012 6995 7000 22593067 PMC3359835
  40. Qaiser F. Trembley J.H. Kren B.T. Wu J.J. Naveed A.K. Ahmed K. Protein kinase CK2 inhibition induces cell death via early impact on mitochondrial function J. Cell Biochem. 115 2014 2103 2115 25043911 PMC4199905
  41. Quinlan E.M. Olstein D.H. Bear M.F. Bidirectional, experience-dependent regulation of N-methyl-D-aspartate receptor subunit composition in the rat visual cortex during postnatal development Proc. Natl. Acad. Sci. USA 96 1999 12876 12880 10536016 PMC23143
  42. Roche K.W. Standley S. McCallum J. Dune Ly C. Ehlers M.D. Wenthold R.J. Molecular determinants of NMDA receptor internalization Nat. Neurosci. 4 2001 794 802 11477425
  43. Rodenas-Ruano A. Chávez A.E. Cossio M.J. Castillo P.E. Zukin R.S. REST-dependent epigenetic remodeling promotes the developmental switch in synaptic NMDA receptors Nat. Neurosci. 15 2012 1382 1390 22960932 PMC3501125
  44. Rutter A.R. Stephenson F.A. Coexpression of postsynaptic density-95 protein with NMDA receptors results in enhanced receptor expression together with a decreased sensitivity to L-glutamate J. Neurochem. 75 2000 2501 2510 11080203
  45. Ryan T.J. Emes R.D. Grant S.G. Komiyama N.H. Evolution of NMDA receptor cytoplasmic interaction domains: implications for organisation of synaptic signalling complexes BMC Neurosci. 9 2008 6 18197970 PMC2257970
  46. Ryan T.J. Kopanitsa M.V. Indersmitten T. Nithianantharajah J. Afinowi N.O. Pettit C. Stanford L.E. Sprengel R. Saksida L.M. Bussey T.J. Evolution of GluN2A/B cytoplasmic domains diversified vertebrate synaptic plasticity and behavior Nat. Neurosci. 16 2013 25 32 23201971 PMC3979286
  47. Sanz-Clemente A. Matta J.A. Isaac J.T. Roche K.W. Casein kinase 2 regulates the NR2 subunit composition of synaptic NMDA receptors Neuron 67 2010 984 996 20869595 PMC2947143
  48. Sanz-Clemente A. Gray J.A. Ogilvie K.A. Nicoll R.A. Roche K.W. Activated CaMKII couples GluN2B and casein kinase 2 to control synaptic NMDA receptors Cell Rep. 3 2013 607 614 23478024 PMC3615108
  49. Sheng M. Cummings J. Roldan L.A. Jan Y.N. Jan L.Y. Changing subunit composition of heteromeric NMDA receptors during development of rat cortex Nature 368 1994 144 147 8139656
  50. Strack S. McNeill R.B. Colbran R.J. Mechanism and regulation of calcium/calmodulin-dependent protein kinase II targeting to the NR2B subunit of the N-methyl-D-aspartate receptor J. Biol. Chem. 275 2000 23798 23806 10764765
  51. Stroebel D. Carvalho S. Grand T. Zhu S. Paoletti P. Controlling NMDA receptor subunit composition using ectopic retention signals J. Neurosci. 34 2014 16630 16636 25505316 PMC6608501
  52. Vieira M.M. Schmidt J. Ferreira J.S. She K. Oku S. Mele M. Santos A.E. Duarte C.B. Craig A.M. Carvalho A.L. Multiple domains in the C-terminus of NMDA receptor GluN2B subunit contribute to neuronal death following in vitro ischemia Neurobiol. Dis. 89 2016 223 234 26581639
  53. Winder D.G. Martin K.C. Muzzio I.A. Rohrer D. Chruscinski A. Kobilka B. Kandel E.R. ERK plays a regulatory role in induction of LTP by theta frequency stimulation and its modulation by beta-adrenergic receptors Neuron 24 1999 715 726 10595521
  54. Yanagawa Y. Kobayashi T. Ohnishi M. Kobayashi T. Tamura S. Tsuzuki T. Sanbo M. Yagi T. Tashiro F. Miyazaki J. Enrichment and efficient screening of ES cells containing a targeted mutation: the use of DT-A gene with the polyadenylation signal as a negative selection maker Transgenic Res. 8 1999 215 221 10478491
  55. Zhang S. Edelmann L. Liu J. Crandall J.E. Morabito M.A. Cdk5 regulates the phosphorylation of tyrosine 1472 NR2B and the surface expression of NMDA receptors J. Neurosci. 28 2008 415 424 18184784 PMC6670547

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Authors
McKay, S., Ryan, T. J., McQueen, J., Indersmitten, T., Marwick, K. F. M., Hasel, P., Kopanitsa, M. V., Baxter, P. S., Martel, M.-A., Kind, P. C., Wyllie, D. J. A., O’Dell, T. J., Grant, S. G. N., Hardingham, G. E., & Komiyama, N. H.
Affiliations
  • UK Dementia Research Institute (GB)
  • The University of Melbourne (AU)
  • University of California, Los Angeles (US)
  • Simons Initiative for the Developing Brain (GB)
  • Hammersmith Hospital (GB)
  • University of Edinburgh (GB)
  • Wellcome Sanger Institute (GB)
Corresponding author
  • Hardingham, Giles E.
  • Komiyama, Noboru H.
Venue
Cell Reports
Publisher
Elsevier BV
Published
2018-10
Volume
25
Issue
4
Pages
841-851.e4
ISSN
2211-1247 (ISSN-L)
OpenAlex
W2896317215
Cited by
42
References
4
Citations by year
2026: 3 · 2025: 4 · 2024: 8 · 2023: 6 · 2022: 3 · 2021: 11 · 2020: 3 · 2019: 4
FWCI
2.05
Type
journal article
Language
en
Open access
Locations
  • Cell Reports (publishedVersion, cc-by)
  • Europe PMC (PubMed Central) (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
  • Edinburgh Research Explorer (University of Edinburgh) (submittedVersion, cc-by)
  • Spiral (Imperial College London) (submittedVersion, cc-by)
Funders
  • MRC
  • Wellcome Trust
  • Alzheimer’s Research UK
  • Alzheimer's Society
  • Wellcome (202932)
  • European Research Council (695568)
Topics
  • Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Biochemistry › Amino Acid Enzymes and Metabolism
Keywords
NMDA receptor, GluN2A, GluN2B, C-terminal domain phosphorylation, synaptogenesis, forebrain development
MeSH terms
Amino Acid Sequence, Animals, Binding Sites, Mice, Inbred C57BL, Mutation, Phosphorylation, Synapses, Theta Rhythm, Receptors, N-Methyl-D-Aspartate, Long-Term Potentiation, Protein Subunits, Rats, Calcium-Calmodulin-Dependent Protein Kinase Type 2, Neurogenesis

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